data_WWQ
#
_chem_comp.id WWQ
_chem_comp.name
"(3S)-N-(4'-carbamoyl[1,1'-biphenyl]-3-yl)-1-[4-(4-methylpiperazin-1-yl)pyridine-2-carbonyl]piperidine-3-carboxamide"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C30 H34 N6 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2023-05-19
_chem_comp.pdbx_modified_date 2023-07-28
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 526.629
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code WWQ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8SWJ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
WWQ C1 C1 C 0 1 N N S N N N 29.010 0.576 32.259 1.104 -3.747 0.367 C1 WWQ 1
WWQ C2 C2 C 0 1 N N N N N N 29.065 1.925 31.545 1.485 -2.893 -0.847 C2 WWQ 2
WWQ C3 C3 C 0 1 N N N N N N 28.018 2.264 29.345 3.764 -2.113 -1.282 C3 WWQ 3
WWQ C4 C4 C 0 1 Y N N N N N 27.220 3.407 29.900 3.297 -0.721 -1.079 C4 WWQ 4
WWQ C5 C5 C 0 1 Y N N N N N 25.851 3.250 30.083 4.208 0.267 -0.728 C5 WWQ 5
WWQ C6 C6 C 0 1 Y N N N N N 25.094 4.351 30.485 3.751 1.571 -0.540 C6 WWQ 6
WWQ C7 C7 C 0 1 N N N N N N 23.069 2.964 31.006 3.923 3.872 -0.047 C7 WWQ 7
WWQ C9 C8 C 0 1 N N N N N N 19.477 4.085 30.944 6.587 5.721 1.868 C9 WWQ 8
WWQ C10 C9 C 0 1 N N N N N N 21.523 5.361 31.041 6.368 3.364 1.355 C10 WWQ 9
WWQ C11 C10 C 0 1 N N N N N N 23.003 5.332 31.409 5.358 2.257 1.045 C11 WWQ 10
WWQ C12 C11 C 0 1 Y N N N N N 25.778 5.553 30.694 2.393 1.828 -0.715 C12 WWQ 11
WWQ C13 C12 C 0 1 Y N N N N N 27.146 5.604 30.480 1.548 0.790 -1.065 C13 WWQ 12
WWQ C14 C13 C 0 1 N N N N N N 30.039 0.898 29.541 3.344 -4.523 -1.380 C14 WWQ 13
WWQ C16 C14 C 0 1 N N N N N N 29.966 -0.467 31.632 1.438 -5.213 0.080 C16 WWQ 14
WWQ O2 O1 O 0 1 N N N N N N 18.150 1.327 33.122 -6.310 4.669 -1.526 O2 WWQ 15
WWQ C24 C15 C 0 1 N N N N N N 18.375 0.103 32.981 -6.947 3.783 -0.991 C24 WWQ 16
WWQ N5 N1 N 0 1 N N N N N N 17.407 -0.782 32.649 -8.277 3.918 -0.819 N5 WWQ 17
WWQ C23 C16 C 0 1 Y N N N N N 19.773 -0.420 33.163 -6.263 2.558 -0.528 C23 WWQ 18
WWQ C22 C17 C 0 1 Y N N N N N 20.844 0.456 33.274 -6.995 1.536 0.082 C22 WWQ 19
WWQ C21 C18 C 0 1 Y N N N N N 22.137 -0.019 33.421 -6.357 0.395 0.513 C21 WWQ 20
WWQ C25 C19 C 0 1 Y N N N N N 20.030 -1.790 33.204 -4.884 2.418 -0.706 C25 WWQ 21
WWQ C26 C20 C 0 1 Y N N N N N 21.317 -2.261 33.393 -4.248 1.276 -0.274 C26 WWQ 22
WWQ C20 C21 C 0 1 Y N N N N N 22.401 -1.386 33.491 -4.979 0.259 0.340 C20 WWQ 23
WWQ C19 C22 C 0 1 Y N N N N N 23.779 -1.890 33.707 -4.293 -0.970 0.805 C19 WWQ 24
WWQ C18 C23 C 0 1 Y N N N N N 24.890 -1.106 33.389 -2.916 -1.107 0.639 C18 WWQ 25
WWQ C27 C24 C 0 1 Y N N N N N 23.997 -3.154 34.260 -5.022 -1.990 1.415 C27 WWQ 26
WWQ C28 C25 C 0 1 Y N N N N N 25.281 -3.605 34.509 -4.380 -3.134 1.848 C28 WWQ 27
WWQ C29 C26 C 0 1 Y N N N N N 26.371 -2.816 34.203 -3.016 -3.272 1.678 C29 WWQ 28
WWQ C17 C27 C 0 1 Y N N N N N 26.181 -1.568 33.620 -2.280 -2.259 1.076 C17 WWQ 29
WWQ N4 N2 N 0 1 N N N N N N 27.368 -0.934 33.168 -0.898 -2.400 0.912 N4 WWQ 30
WWQ C C28 C 0 1 N N N N N N 27.570 0.049 32.285 -0.372 -3.610 0.635 C WWQ 31
WWQ O O2 O 0 1 N N N N N N 26.706 0.513 31.561 -1.088 -4.589 0.602 O WWQ 32
WWQ C15 C29 C 0 1 N N N N N N 29.912 -0.468 30.103 2.942 -5.358 -0.160 C15 WWQ 33
WWQ N N3 N 0 1 N N N N N N 28.983 1.749 30.092 2.896 -3.138 -1.173 N WWQ 34
WWQ O1 O3 O 0 1 N N N N N N 27.805 1.914 28.195 4.930 -2.329 -1.546 O1 WWQ 35
WWQ N3 N4 N 0 1 Y N N N N N 27.880 4.553 30.105 2.010 -0.430 -1.240 N3 WWQ 36
WWQ N1 N5 N 0 1 N N N N N N 23.699 4.249 30.701 4.630 2.591 -0.187 N1 WWQ 37
WWQ N2 N6 N 0 1 N N N N N N 20.890 4.071 31.319 5.660 4.645 1.495 N2 WWQ 38
WWQ C8 C30 C 0 1 N N N N N N 21.600 3.013 30.597 4.933 4.979 0.263 C8 WWQ 39
WWQ H1 H1 H 0 1 N N N N N N 29.328 0.734 33.300 1.665 -3.410 1.239 H1 WWQ 40
WWQ H2 H2 H 0 1 N N N N N N 30.012 2.427 31.795 0.860 -3.168 -1.697 H2 WWQ 41
WWQ H3 H3 H 0 1 N N N N N N 28.221 2.546 31.881 1.340 -1.839 -0.612 H3 WWQ 42
WWQ H4 H4 H 0 1 N N N N N N 25.381 2.292 29.917 5.254 0.029 -0.601 H4 WWQ 43
WWQ H5 H5 H 0 1 N N N N N N 23.143 2.765 32.085 3.402 4.103 -0.976 H5 WWQ 44
WWQ H6 H6 H 0 1 N N N N N N 23.579 2.164 30.450 3.200 3.800 0.766 H6 WWQ 45
WWQ H7 H7 H 0 1 N N N N N N 18.959 4.884 31.494 7.350 5.827 1.096 H7 WWQ 46
WWQ H8 H8 H 0 1 N N N N N N 19.386 4.266 29.863 6.037 6.657 1.965 H8 WWQ 47
WWQ H9 H9 H 0 1 N N N N N N 19.022 3.115 31.192 7.063 5.479 2.818 H9 WWQ 48
WWQ H10 H10 H 0 1 N N N N N N 21.423 5.588 29.969 6.889 3.133 2.284 H10 WWQ 49
WWQ H11 H11 H 0 1 N N N N N N 21.021 6.143 31.630 7.090 3.436 0.541 H11 WWQ 50
WWQ H12 H12 H 0 1 N N N N N N 23.101 5.175 32.493 5.884 1.312 0.912 H12 WWQ 51
WWQ H13 H13 H 0 1 N N N N N N 23.461 6.294 31.135 4.652 2.167 1.871 H13 WWQ 52
WWQ H14 H14 H 0 1 N N N N N N 25.244 6.434 31.019 2.003 2.826 -0.578 H14 WWQ 53
WWQ H15 H15 H 0 1 N N N N N N 27.648 6.549 30.625 0.495 0.985 -1.201 H15 WWQ 54
WWQ H16 H16 H 0 1 N N N N N N 29.942 0.855 28.446 4.427 -4.544 -1.496 H16 WWQ 55
WWQ H17 H17 H 0 1 N N N N N N 31.022 1.314 29.806 2.870 -4.931 -2.273 H17 WWQ 56
WWQ H18 H18 H 0 1 N N N N N N 29.685 -1.466 31.995 1.145 -5.825 0.933 H18 WWQ 57
WWQ H19 H19 H 0 1 N N N N N N 30.994 -0.238 31.948 0.896 -5.542 -0.806 H19 WWQ 58
WWQ H20 H20 H 0 1 N N N N N N 16.469 -0.467 32.506 -8.726 4.722 -1.123 H20 WWQ 59
WWQ H21 H21 H 0 1 N N N N N N 17.630 -1.751 32.546 -8.785 3.210 -0.392 H21 WWQ 60
WWQ H22 H22 H 0 1 N N N N N N 20.667 1.521 33.245 -8.062 1.642 0.217 H22 WWQ 61
WWQ H23 H23 H 0 1 N N N N N N 22.956 0.683 33.483 -6.922 -0.394 0.985 H23 WWQ 62
WWQ H24 H24 H 0 1 N N N N N N 19.216 -2.490 33.087 -4.318 3.204 -1.182 H24 WWQ 63
WWQ H25 H25 H 0 1 N N N N N N 21.487 -3.325 33.466 -3.182 1.167 -0.412 H25 WWQ 64
WWQ H26 H26 H 0 1 N N N N N N 24.744 -0.127 32.957 -2.346 -0.318 0.171 H26 WWQ 65
WWQ H27 H27 H 0 1 N N N N N N 23.154 -3.786 34.496 -6.088 -1.886 1.549 H27 WWQ 66
WWQ H28 H28 H 0 1 N N N N N N 25.431 -4.581 34.946 -4.947 -3.923 2.320 H28 WWQ 67
WWQ H29 H29 H 0 1 N N N N N N 27.370 -3.167 34.416 -2.519 -4.169 2.019 H29 WWQ 68
WWQ H30 H30 H 0 1 N N N N N N 28.205 -1.287 33.586 -0.317 -1.628 0.998 H30 WWQ 69
WWQ H31 H31 H 0 1 N N N N N N 28.951 -0.896 29.782 3.182 -6.405 -0.341 H31 WWQ 70
WWQ H32 H32 H 0 1 N N N N N N 30.736 -1.088 29.719 3.486 -5.006 0.717 H32 WWQ 71
WWQ H34 H34 H 0 1 N N N N N N 21.534 3.208 29.516 5.638 5.069 -0.563 H34 WWQ 72
WWQ H35 H35 H 0 1 N N N N N N 21.131 2.045 30.825 4.406 5.924 0.396 H35 WWQ 73
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
WWQ O1 C3 DOUB N N 1
WWQ C3 C4 SING N N 2
WWQ C3 N SING N N 3
WWQ C14 N SING N N 4
WWQ C14 C15 SING N N 5
WWQ C4 C5 DOUB Y N 6
WWQ C4 N3 SING Y N 7
WWQ C5 C6 SING Y N 8
WWQ N C2 SING N N 9
WWQ C15 C16 SING N N 10
WWQ N3 C13 DOUB Y N 11
WWQ C13 C12 SING Y N 12
WWQ C6 C12 DOUB Y N 13
WWQ C6 N1 SING N N 14
WWQ C8 C7 SING N N 15
WWQ C8 N2 SING N N 16
WWQ N1 C7 SING N N 17
WWQ N1 C11 SING N N 18
WWQ C9 N2 SING N N 19
WWQ C10 N2 SING N N 20
WWQ C10 C11 SING N N 21
WWQ C2 C1 SING N N 22
WWQ O C DOUB N N 23
WWQ C16 C1 SING N N 24
WWQ C1 C SING N N 25
WWQ C N4 SING N N 26
WWQ N5 C24 SING N N 27
WWQ C24 O2 DOUB N N 28
WWQ C24 C23 SING N N 29
WWQ C23 C25 DOUB Y N 30
WWQ C23 C22 SING Y N 31
WWQ N4 C17 SING N N 32
WWQ C25 C26 SING Y N 33
WWQ C22 C21 DOUB Y N 34
WWQ C18 C17 DOUB Y N 35
WWQ C18 C19 SING Y N 36
WWQ C26 C20 DOUB Y N 37
WWQ C21 C20 SING Y N 38
WWQ C20 C19 SING N N 39
WWQ C17 C29 SING Y N 40
WWQ C19 C27 DOUB Y N 41
WWQ C29 C28 DOUB Y N 42
WWQ C27 C28 SING Y N 43
WWQ C1 H1 SING N N 44
WWQ C2 H2 SING N N 45
WWQ C2 H3 SING N N 46
WWQ C5 H4 SING N N 47
WWQ C7 H5 SING N N 48
WWQ C7 H6 SING N N 49
WWQ C9 H7 SING N N 50
WWQ C9 H8 SING N N 51
WWQ C9 H9 SING N N 52
WWQ C10 H10 SING N N 53
WWQ C10 H11 SING N N 54
WWQ C11 H12 SING N N 55
WWQ C11 H13 SING N N 56
WWQ C12 H14 SING N N 57
WWQ C13 H15 SING N N 58
WWQ C14 H16 SING N N 59
WWQ C14 H17 SING N N 60
WWQ C16 H18 SING N N 61
WWQ C16 H19 SING N N 62
WWQ N5 H20 SING N N 63
WWQ N5 H21 SING N N 64
WWQ C22 H22 SING N N 65
WWQ C21 H23 SING N N 66
WWQ C25 H24 SING N N 67
WWQ C26 H25 SING N N 68
WWQ C18 H26 SING N N 69
WWQ C27 H27 SING N N 70
WWQ C28 H28 SING N N 71
WWQ C29 H29 SING N N 72
WWQ N4 H30 SING N N 73
WWQ C15 H31 SING N N 74
WWQ C15 H32 SING N N 75
WWQ C8 H34 SING N N 76
WWQ C8 H35 SING N N 77
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
WWQ SMILES ACDLabs 12.01 CN1CCN(CC1)c1cc(ncc1)C(=O)N1CCCC(C1)C(=O)Nc1cc(ccc1)c1ccc(cc1)C(N)=O
WWQ InChI InChI 1.06 InChI=1S/C30H34N6O3/c1-34-14-16-35(17-15-34)26-11-12-32-27(19-26)30(39)36-13-3-5-24(20-36)29(38)33-25-6-2-4-23(18-25)21-7-9-22(10-8-21)28(31)37/h2,4,6-12,18-19,24H,3,5,13-17,20H2,1H3,(H2,31,37)(H,33,38)/t24-/m0/s1
WWQ InChIKey InChI 1.06 KDJWESNUVQMZGH-DEOSSOPVSA-N
WWQ SMILES_CANONICAL CACTVS 3.385 CN1CCN(CC1)c2ccnc(c2)C(=O)N3CCC[C@@H](C3)C(=O)Nc4cccc(c4)c5ccc(cc5)C(N)=O
WWQ SMILES CACTVS 3.385 CN1CCN(CC1)c2ccnc(c2)C(=O)N3CCC[CH](C3)C(=O)Nc4cccc(c4)c5ccc(cc5)C(N)=O
WWQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CN1CCN(CC1)c2ccnc(c2)C(=O)N3CCC[C@@H](C3)C(=O)Nc4cccc(c4)c5ccc(cc5)C(=O)N
WWQ SMILES "OpenEye OEToolkits" 2.0.7 CN1CCN(CC1)c2ccnc(c2)C(=O)N3CCCC(C3)C(=O)Nc4cccc(c4)c5ccc(cc5)C(=O)N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
WWQ "SYSTEMATIC NAME" ACDLabs 12.01 "(3S)-N-(4'-carbamoyl[1,1'-biphenyl]-3-yl)-1-[4-(4-methylpiperazin-1-yl)pyridine-2-carbonyl]piperidine-3-carboxamide"
WWQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 (3~{S})-~{N}-[3-(4-aminocarbonylphenyl)phenyl]-1-[4-(4-methylpiperazin-1-yl)pyridin-2-yl]carbonyl-piperidine-3-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
WWQ 'Create component' 2023-05-19 RCSB
WWQ 'Initial release' 2023-08-02 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
WWQ C1 C 9.002 -0.090 1
WWQ C2 C 9.002 -1.590 2
WWQ C3 C 10.301 -3.840 3
WWQ C4 C 11.600 -4.590 4
WWQ C5 C 11.600 -6.090 5
WWQ C6 C 12.899 -6.840 6
WWQ C7 C 14.198 -9.090 7
WWQ C9 C 12.899 -12.840 8
WWQ C10 C 11.600 -10.590 9
WWQ C11 C 11.600 -9.090 10
WWQ C12 C 14.198 -6.090 11
WWQ C13 C 14.198 -4.590 12
WWQ C14 C 11.600 -1.590 13
WWQ C16 C 10.301 0.660 14
WWQ O2 O 3.805 11.910 15
WWQ C24 C 5.104 11.160 16
WWQ N5 N 6.404 11.910 17
WWQ C23 C 5.104 9.660 18
WWQ C22 C 6.404 8.910 19
WWQ C21 C 6.404 7.410 20
WWQ C25 C 3.805 8.910 21
WWQ C26 C 3.805 7.410 22
WWQ C20 C 5.104 6.660 23
WWQ C19 C 5.104 5.160 24
WWQ C18 C 6.404 4.410 25
WWQ C27 C 3.805 4.410 26
WWQ C28 C 3.805 2.910 27
WWQ C29 C 5.104 2.160 28
WWQ C17 C 6.404 2.910 29
WWQ N4 N 7.702 2.160 30
WWQ C C 7.702 0.660 31
WWQ O O 6.404 -0.090 32
WWQ C15 C 11.600 -0.090 33
WWQ N N 10.301 -2.340 34
WWQ O1 O 9.002 -4.590 35
WWQ N3 N 12.899 -3.840 36
WWQ N1 N 12.899 -8.340 37
WWQ N2 N 12.899 -11.340 38
WWQ C8 C 14.198 -10.590 39
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
WWQ O1 C3 DOUBLE NONE 1
WWQ C3 C4 SINGLE NONE 2
WWQ C3 N SINGLE NONE 3
WWQ C14 N SINGLE NONE 4
WWQ C14 C15 SINGLE NONE 5
WWQ C4 C5 DOUBLE NONE 6
WWQ C4 N3 SINGLE NONE 7
WWQ C5 C6 SINGLE NONE 8
WWQ N C2 SINGLE NONE 9
WWQ C15 C16 SINGLE NONE 10
WWQ N3 C13 DOUBLE NONE 11
WWQ C13 C12 SINGLE NONE 12
WWQ C6 C12 DOUBLE NONE 13
WWQ C6 N1 SINGLE NONE 14
WWQ C8 C7 SINGLE NONE 15
WWQ C8 N2 SINGLE NONE 16
WWQ N1 C7 SINGLE NONE 17
WWQ N1 C11 SINGLE NONE 18
WWQ C9 N2 SINGLE NONE 19
WWQ C10 N2 SINGLE NONE 20
WWQ C10 C11 SINGLE NONE 21
WWQ C2 C1 SINGLE NONE 22
WWQ O C DOUBLE NONE 23
WWQ C16 C1 SINGLE NONE 24
WWQ C1 C SINGLE BEGINWEDGE 25
WWQ C N4 SINGLE NONE 26
WWQ N5 C24 SINGLE NONE 27
WWQ C24 O2 DOUBLE NONE 28
WWQ C24 C23 SINGLE NONE 29
WWQ C23 C25 DOUBLE NONE 30
WWQ C23 C22 SINGLE NONE 31
WWQ N4 C17 SINGLE NONE 32
WWQ C25 C26 SINGLE NONE 33
WWQ C22 C21 DOUBLE NONE 34
WWQ C18 C17 DOUBLE NONE 35
WWQ C18 C19 SINGLE NONE 36
WWQ C26 C20 DOUBLE NONE 37
WWQ C21 C20 SINGLE NONE 38
WWQ C20 C19 SINGLE NONE 39
WWQ C17 C29 SINGLE NONE 40
WWQ C19 C27 DOUBLE NONE 41
WWQ C29 C28 DOUBLE NONE 42
WWQ C27 C28 SINGLE NONE 43
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
WWQ MurckoScaffold S1 scaffold 'O=C(Nc1cccc(-c2ccccc2)c1)[C@H]1CCCN(C(=O)c2cc(N3CCNCC3)ccn2)C1' InChI=1S/C28H31N5O2/c34-27(31-24-10-4-8-22(18-24)21-6-2-1-3-7-21)23-9-5-15-33(20-23)28(35)26-19-25(11-12-30-26)32-16-13-29-14-17-32/h1-4,6-8,10-12,18-19,23,29H,5,9,13-17,20H2,(H,31,34)/t23-/m0/s1 GTGKJNPNTYDGHD-QHCPKHFHSA-N
WWQ amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
WWQ phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
WWQ piperazine F3 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
WWQ pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
WWQ Z2856434762 F5 fragment CN(C)c1ccncc1 InChI=1S/C7H10N2/c1-9(2)7-3-5-8-6-4-7/h3-6H,1-2H3 VHYFNPMBLIVWCW-UHFFFAOYSA-N
WWQ Z220816104 F6 fragment CC(=O)N1CCCC(C(N)=O)C1 InChI=1S/C8H14N2O2/c1-6(11)10-4-2-3-7(5-10)8(9)12/h7H,2-5H2,1H3,(H2,9,12) MIFWTSLDLPGOCM-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
WWQ C1 S1 1
WWQ C2 S1 1
WWQ C3 S1 1
WWQ C4 S1 1
WWQ C5 S1 1
WWQ C6 S1 1
WWQ C7 S1 1
WWQ C10 S1 1
WWQ C11 S1 1
WWQ C12 S1 1
WWQ C13 S1 1
WWQ C14 S1 1
WWQ C16 S1 1
WWQ C23 S1 1
WWQ C22 S1 1
WWQ C21 S1 1
WWQ C25 S1 1
WWQ C26 S1 1
WWQ C20 S1 1
WWQ C19 S1 1
WWQ C18 S1 1
WWQ C27 S1 1
WWQ C28 S1 1
WWQ C29 S1 1
WWQ C17 S1 1
WWQ N4 S1 1
WWQ C S1 1
WWQ O S1 1
WWQ C15 S1 1
WWQ N S1 1
WWQ O1 S1 1
WWQ N3 S1 1
WWQ N1 S1 1
WWQ N2 S1 1
WWQ C8 S1 1
WWQ N5 F1 1
WWQ C24 F1 1
WWQ O2 F1 1
WWQ C23 F1 1
WWQ N4 F1 2
WWQ C F1 2
WWQ O F1 2
WWQ C1 F1 2
WWQ N F1 3
WWQ C3 F1 3
WWQ O1 F1 3
WWQ C4 F1 3
WWQ C23 F2 1
WWQ C25 F2 1
WWQ C26 F2 1
WWQ C20 F2 1
WWQ C21 F2 1
WWQ C22 F2 1
WWQ C19 F2 2
WWQ C18 F2 2
WWQ C17 F2 2
WWQ C29 F2 2
WWQ C28 F2 2
WWQ C27 F2 2
WWQ N1 F3 1
WWQ C7 F3 1
WWQ C8 F3 1
WWQ N2 F3 1
WWQ C10 F3 1
WWQ C11 F3 1
WWQ C4 F4 1
WWQ C5 F4 1
WWQ C6 F4 1
WWQ C12 F4 1
WWQ C13 F4 1
WWQ N3 F4 1
WWQ C7 F5 1
WWQ N1 F5 1
WWQ C11 F5 1
WWQ C6 F5 1
WWQ C5 F5 1
WWQ C4 F5 1
WWQ N3 F5 1
WWQ C13 F5 1
WWQ C12 F5 1
WWQ C4 F6 1
WWQ C3 F6 1
WWQ O1 F6 1
WWQ N F6 1
WWQ C14 F6 1
WWQ C15 F6 1
WWQ C16 F6 1
WWQ C1 F6 1
WWQ C2 F6 1
WWQ C F6 1
WWQ O F6 1
WWQ N4 F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id WWQ
_pdbe_chem_comp_rdkit_properties.exactmw 526.269
_pdbe_chem_comp_rdkit_properties.amw 526.641
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 39
_pdbe_chem_comp_rdkit_properties.NumAtoms 73
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.333
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 276.095
_pdbe_chem_comp_rdkit_properties.tpsa 111.870
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.840
_pdbe_chem_comp_rdkit_properties.CrippenMR 148.098
_pdbe_chem_comp_rdkit_properties.chi0v 18.908
_pdbe_chem_comp_rdkit_properties.chi1v 10.243
_pdbe_chem_comp_rdkit_properties.chi2v 4.462
_pdbe_chem_comp_rdkit_properties.chi3v 4.462
_pdbe_chem_comp_rdkit_properties.chi4v 2.728
_pdbe_chem_comp_rdkit_properties.chi0n 52.908
_pdbe_chem_comp_rdkit_properties.chi1n 27.085
_pdbe_chem_comp_rdkit_properties.chi2n 4.462
_pdbe_chem_comp_rdkit_properties.chi3n 4.462
_pdbe_chem_comp_rdkit_properties.chi4n 2.728
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.240
_pdbe_chem_comp_rdkit_properties.kappa1 7.483
_pdbe_chem_comp_rdkit_properties.kappa2 11.653
_pdbe_chem_comp_rdkit_properties.kappa3 6.259
_pdbe_chem_comp_rdkit_properties.Phi 2.236
#
_pdbe_chem_comp_external_mappings.comp_id WWQ
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PDBe
_pdbe_chem_comp_external_mappings.resource_id WWQ
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
WWQ C1 -0.716 3.415 -0.939 ETKDGv3 1
WWQ C2 0.810 3.252 -0.808 ETKDGv3 2
WWQ C3 2.431 2.437 0.929 ETKDGv3 3
WWQ C4 2.634 1.035 0.492 ETKDGv3 4
WWQ C5 3.843 0.448 0.569 ETKDGv3 5
WWQ C6 4.014 -0.963 0.139 ETKDGv3 6
WWQ C7 6.045 -1.524 1.497 ETKDGv3 7
WWQ C9 9.415 -2.396 0.132 ETKDGv3 8
WWQ C10 7.282 -2.507 -1.018 ETKDGv3 9
WWQ C11 5.748 -2.524 -0.828 ETKDGv3 10
WWQ C12 2.943 -1.634 -0.320 ETKDGv3 11
WWQ C13 1.633 -0.963 -0.383 ETKDGv3 12
WWQ C14 0.756 4.201 1.518 ETKDGv3 13
WWQ C16 -1.260 4.500 0.012 ETKDGv3 14
WWQ O2 -10.745 0.085 -0.579 ETKDGv3 15
WWQ C24 -10.005 -0.817 -1.057 ETKDGv3 16
WWQ N5 -10.563 -1.741 -1.997 ETKDGv3 17
WWQ C23 -8.581 -0.881 -0.651 ETKDGv3 18
WWQ C22 -7.927 0.325 -0.084 ETKDGv3 19
WWQ C21 -6.646 0.290 0.300 ETKDGv3 20
WWQ C25 -7.866 -2.018 -0.755 ETKDGv3 21
WWQ C26 -6.450 -2.056 -0.335 ETKDGv3 22
WWQ C20 -5.854 -0.960 0.172 ETKDGv3 23
WWQ C19 -4.428 -0.979 0.585 ETKDGv3 24
WWQ C18 -3.554 0.186 0.285 ETKDGv3 25
WWQ C27 -3.909 -2.031 1.248 ETKDGv3 26
WWQ C28 -2.496 -2.024 1.673 ETKDGv3 27
WWQ C29 -1.716 -0.974 1.397 ETKDGv3 28
WWQ C17 -2.257 0.183 0.647 ETKDGv3 29
WWQ N4 -1.400 1.306 0.384 ETKDGv3 30
WWQ C -1.461 2.101 -0.814 ETKDGv3 31
WWQ O -2.124 1.690 -1.805 ETKDGv3 32
WWQ C15 -0.768 4.340 1.455 ETKDGv3 33
WWQ N 1.227 3.158 0.598 ETKDGv3 34
WWQ O1 3.318 3.005 1.625 ETKDGv3 35
WWQ N3 1.515 0.273 0.003 ETKDGv3 36
WWQ N1 5.305 -1.600 0.229 ETKDGv3 37
WWQ N2 8.016 -1.941 0.137 ETKDGv3 38
WWQ C8 7.366 -2.285 1.409 ETKDGv3 39
WWQ H1 -0.900 3.788 -1.972 ETKDGv3 40
WWQ H2 1.306 4.138 -1.261 ETKDGv3 41
WWQ H3 1.142 2.370 -1.395 ETKDGv3 42
WWQ H4 4.702 1.006 0.919 ETKDGv3 43
WWQ H5 5.426 -1.942 2.320 ETKDGv3 44
WWQ H6 6.275 -0.464 1.731 ETKDGv3 45
WWQ H7 9.893 -2.154 -0.842 ETKDGv3 46
WWQ H8 9.989 -1.868 0.923 ETKDGv3 47
WWQ H9 9.482 -3.493 0.307 ETKDGv3 48
WWQ H10 7.521 -1.892 -1.913 ETKDGv3 49
WWQ H11 7.614 -3.548 -1.235 ETKDGv3 50
WWQ H12 5.425 -3.552 -0.554 ETKDGv3 51
WWQ H13 5.264 -2.266 -1.796 ETKDGv3 52
WWQ H14 3.019 -2.669 -0.625 ETKDGv3 53
WWQ H15 0.766 -1.499 -0.743 ETKDGv3 54
WWQ H16 1.232 5.170 1.251 ETKDGv3 55
WWQ H17 1.038 3.952 2.565 ETKDGv3 56
WWQ H18 -2.372 4.497 -0.003 ETKDGv3 57
WWQ H19 -0.931 5.496 -0.360 ETKDGv3 58
WWQ H20 -9.966 -2.399 -2.543 ETKDGv3 59
WWQ H21 -11.583 -1.705 -2.217 ETKDGv3 60
WWQ H22 -8.484 1.248 0.022 ETKDGv3 61
WWQ H23 -6.196 1.179 0.724 ETKDGv3 62
WWQ H24 -8.310 -2.932 -1.124 ETKDGv3 63
WWQ H25 -5.899 -2.980 -0.461 ETKDGv3 64
WWQ H26 -3.975 1.043 -0.222 ETKDGv3 65
WWQ H27 -4.522 -2.886 1.506 ETKDGv3 66
WWQ H28 -2.094 -2.869 2.217 ETKDGv3 67
WWQ H29 -0.682 -0.975 1.717 ETKDGv3 68
WWQ H30 -0.615 1.464 1.051 ETKDGv3 69
WWQ H31 -1.253 3.464 1.932 ETKDGv3 70
WWQ H32 -1.073 5.234 2.041 ETKDGv3 71
WWQ H34 7.183 -3.383 1.477 ETKDGv3 72
WWQ H35 8.001 -1.984 2.272 ETKDGv3 73
#