data_X4C
#
_chem_comp.id X4C
_chem_comp.name 8-methyl-6-[2-(5-methyl-1-phenyl-1H-benzimidazol-2-yl)ethyl]imidazo[1,5-a]pyrimidine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H21 N5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2014-03-13
_chem_comp.pdbx_modified_date 2014-05-30
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 367.446
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code X4C
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3WS8
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
X4C C25 C25 C 0 1 Y N N N N N 17.793 7.941 55.807 -0.232 4.103 0.067 C25 X4C 1
X4C C24 C24 C 0 1 Y N N N N N 18.940 8.562 56.258 0.140 3.148 -0.861 C24 X4C 2
X4C C26 C26 C 0 1 Y N N N N N 17.719 6.558 55.798 -1.158 3.795 1.048 C26 X4C 3
X4C C17 C17 C 0 1 Y N N N N N 23.980 6.234 55.016 -5.597 0.069 -0.395 C17 X4C 4
X4C C15 C15 C 0 1 Y N N N N N 22.629 6.355 55.274 -4.384 0.710 -0.260 C15 X4C 5
X4C C23 C23 C 0 1 Y N N N N N 20.002 7.797 56.693 -0.417 1.884 -0.815 C23 X4C 6
X4C C27 C27 C 0 1 Y N N N N N 18.789 5.784 56.212 -1.714 2.532 1.102 C27 X4C 7
X4C C12 C12 C 0 1 Y N N N N N 24.469 4.981 57.014 -4.573 -2.051 0.032 C12 X4C 8
X4C C16 C16 C 0 1 Y N N N N N 24.867 5.574 55.843 -5.685 -1.309 -0.248 C16 X4C 9
X4C C8 C8 C 0 1 Y N N N N N 23.127 5.090 57.295 -3.333 -1.423 0.173 C8 X4C 10
X4C C10 C10 C 0 1 Y N N N N N 22.253 5.748 56.453 -3.244 -0.029 0.024 C10 X4C 11
X4C C18 C18 C 0 1 Y N N N N N 19.924 6.418 56.660 -1.351 1.574 0.165 C18 X4C 12
X4C C9 C9 C 0 1 Y N N N N N 18.529 3.265 63.046 4.392 -2.150 0.124 C9 X4C 13
X4C C7 C7 C 0 1 Y N N N N N 17.688 2.714 62.107 4.570 -0.788 0.000 C7 X4C 14
X4C C1 C1 C 0 1 Y N N N N N 21.205 4.963 58.216 -1.250 -0.872 0.469 C1 X4C 15
X4C C2 C2 C 0 1 Y N N N N N 19.580 3.370 61.187 2.452 -1.297 -0.312 C2 X4C 16
X4C C21 C21 C 0 1 Y N N N N N 16.658 1.780 59.705 4.279 1.882 -0.363 C21 X4C 17
X4C C14 C14 C 0 1 Y N N N N N 17.878 2.324 59.728 3.186 1.090 -0.462 C14 X4C 18
X4C C22 C22 C 0 1 Y N N N N N 15.983 1.732 61.027 5.529 1.308 -0.071 C22 X4C 19
X4C C20 C20 C 0 1 N N N N N N 26.295 5.508 55.458 -7.020 -1.992 -0.398 C20 X4C 20
X4C C28 C28 C 0 1 N N N N N N 18.335 3.452 64.487 5.466 -3.163 0.430 C28 X4C 21
X4C C11 C11 C 0 1 N N N N N N 20.114 4.655 59.160 0.228 -0.983 0.739 C11 X4C 22
X4C C13 C13 C 0 1 N N N N N N 20.582 3.616 60.158 0.974 -1.187 -0.582 C13 X4C 23
X4C N4 N4 N 0 1 Y N N N N N 22.463 4.612 58.374 -2.081 -1.873 0.443 N4 X4C 24
X4C N3 N3 N 0 1 Y N N N N N 19.699 3.674 62.461 3.098 -2.409 -0.069 N3 X4C 25
X4C N19 N19 N 0 1 Y N N N N N 16.453 2.165 62.156 5.642 0.013 0.097 N19 X4C 26
X4C N5 N5 N 0 1 Y N N N N N 21.026 5.655 57.052 -1.913 0.292 0.217 N5 X4C 27
X4C N6 N6 N 0 1 Y N N N N N 18.373 2.780 60.923 3.325 -0.260 -0.280 N6 X4C 28
X4C H1 H1 H 0 1 N N N N N N 16.957 8.531 55.463 0.204 5.090 0.029 H1 X4C 29
X4C H2 H2 H 0 1 N N N N N N 19.006 9.640 56.270 0.866 3.390 -1.623 H2 X4C 30
X4C H3 H3 H 0 1 N N N N N N 16.812 6.076 55.463 -1.446 4.543 1.771 H3 X4C 31
X4C H4 H4 H 0 1 N N N N N N 24.366 6.683 54.113 -6.486 0.642 -0.612 H4 X4C 32
X4C H5 H5 H 0 1 N N N N N N 21.940 6.871 54.621 -4.322 1.782 -0.375 H5 X4C 33
X4C H6 H6 H 0 1 N N N N N N 20.897 8.277 57.060 -0.126 1.139 -1.540 H6 X4C 34
X4C H7 H7 H 0 1 N N N N N N 18.734 4.706 56.184 -2.436 2.292 1.868 H7 X4C 35
X4C H8 H8 H 0 1 N N N N N N 25.158 4.467 57.667 -4.652 -3.123 0.144 H8 X4C 36
X4C H9 H9 H 0 1 N N N N N N 16.201 1.406 58.801 4.191 2.949 -0.503 H9 X4C 37
X4C H10 H10 H 0 1 N N N N N N 18.463 2.403 58.824 2.220 1.516 -0.686 H10 X4C 38
X4C H11 H11 H 0 1 N N N N N N 14.998 1.290 61.051 6.402 1.937 0.008 H11 X4C 39
X4C H12 H12 H 0 1 N N N N N N 26.828 6.376 55.873 -7.168 -2.274 -1.441 H12 X4C 40
X4C H13 H13 H 0 1 N N N N N N 26.739 4.582 55.853 -7.044 -2.884 0.227 H13 X4C 41
X4C H14 H14 H 0 1 N N N N N N 26.380 5.516 54.361 -7.813 -1.310 -0.091 H14 X4C 42
X4C H15 H15 H 0 1 N N N N N N 19.227 3.930 64.919 5.547 -3.292 1.510 H15 X4C 43
X4C H16 H16 H 0 1 N N N N N N 17.457 4.092 64.659 5.208 -4.116 -0.031 H16 X4C 44
X4C H17 H17 H 0 1 N N N N N N 18.176 2.474 64.965 6.419 -2.813 0.034 H17 X4C 45
X4C H18 H18 H 0 1 N N N N N N 19.823 5.571 59.695 0.580 -0.069 1.217 H18 X4C 46
X4C H19 H19 H 0 1 N N N N N N 19.249 4.265 58.604 0.415 -1.832 1.396 H19 X4C 47
X4C H20 H20 H 0 1 N N N N N N 20.785 2.675 59.625 0.787 -0.338 -1.239 H20 X4C 48
X4C H21 H21 H 0 1 N N N N N N 21.506 3.972 60.637 0.622 -2.101 -1.060 H21 X4C 49
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
X4C C17 C15 DOUB Y N 1
X4C C17 C16 SING Y N 2
X4C C15 C10 SING Y N 3
X4C C20 C16 SING N N 4
X4C C26 C25 DOUB Y N 5
X4C C26 C27 SING Y N 6
X4C C25 C24 SING Y N 7
X4C C16 C12 DOUB Y N 8
X4C C27 C18 DOUB Y N 9
X4C C24 C23 DOUB Y N 10
X4C C10 N5 SING Y N 11
X4C C10 C8 DOUB Y N 12
X4C C18 C23 SING Y N 13
X4C C18 N5 SING N N 14
X4C C12 C8 SING Y N 15
X4C N5 C1 SING Y N 16
X4C C8 N4 SING Y N 17
X4C C1 N4 DOUB Y N 18
X4C C1 C11 SING N N 19
X4C C11 C13 SING N N 20
X4C C21 C14 DOUB Y N 21
X4C C21 C22 SING Y N 22
X4C C14 N6 SING Y N 23
X4C C13 C2 SING N N 24
X4C N6 C2 SING Y N 25
X4C N6 C7 SING Y N 26
X4C C22 N19 DOUB Y N 27
X4C C2 N3 DOUB Y N 28
X4C C7 N19 SING Y N 29
X4C C7 C9 DOUB Y N 30
X4C N3 C9 SING Y N 31
X4C C9 C28 SING N N 32
X4C C25 H1 SING N N 33
X4C C24 H2 SING N N 34
X4C C26 H3 SING N N 35
X4C C17 H4 SING N N 36
X4C C15 H5 SING N N 37
X4C C23 H6 SING N N 38
X4C C27 H7 SING N N 39
X4C C12 H8 SING N N 40
X4C C21 H9 SING N N 41
X4C C14 H10 SING N N 42
X4C C22 H11 SING N N 43
X4C C20 H12 SING N N 44
X4C C20 H13 SING N N 45
X4C C20 H14 SING N N 46
X4C C28 H15 SING N N 47
X4C C28 H16 SING N N 48
X4C C28 H17 SING N N 49
X4C C11 H18 SING N N 50
X4C C11 H19 SING N N 51
X4C C13 H20 SING N N 52
X4C C13 H21 SING N N 53
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
X4C SMILES ACDLabs 12.01 n2c1cc(ccc1n(c2CCc4nc(c3ncccn34)C)c5ccccc5)C
X4C InChI InChI 1.03 InChI=1S/C23H21N5/c1-16-9-10-20-19(15-16)26-22(28(20)18-7-4-3-5-8-18)12-11-21-25-17(2)23-24-13-6-14-27(21)23/h3-10,13-15H,11-12H2,1-2H3
X4C InChIKey InChI 1.03 VOYXDWSUNQJWTO-UHFFFAOYSA-N
X4C SMILES_CANONICAL CACTVS 3.385 Cc1ccc2n(c(CCc3nc(C)c4ncccn34)nc2c1)c5ccccc5
X4C SMILES CACTVS 3.385 Cc1ccc2n(c(CCc3nc(C)c4ncccn34)nc2c1)c5ccccc5
X4C SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 Cc1ccc2c(c1)nc(n2c3ccccc3)CCc4nc(c5n4cccn5)C
X4C SMILES "OpenEye OEToolkits" 1.7.6 Cc1ccc2c(c1)nc(n2c3ccccc3)CCc4nc(c5n4cccn5)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
X4C "SYSTEMATIC NAME" ACDLabs 12.01 8-methyl-6-[2-(5-methyl-1-phenyl-1H-benzimidazol-2-yl)ethyl]imidazo[1,5-a]pyrimidine
X4C "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 8-methyl-6-[2-(5-methyl-1-phenyl-benzimidazol-2-yl)ethyl]imidazo[1,5-a]pyrimidine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
X4C 'Create component' 2014-03-13 PDBJ
X4C 'Initial release' 2014-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
X4C C25 C 9.714 5.230 1
X4C C24 C 8.247 4.921 2
X4C C26 C 10.716 4.114 3
X4C C17 C 4.299 0.496 4
X4C C15 C 5.598 1.246 5
X4C C23 C 7.781 3.495 6
X4C C27 C 10.250 2.688 7
X4C C12 C 5.598 -1.754 8
X4C C16 C 4.299 -1.004 9
X4C C8 C 6.897 -1.004 10
X4C C10 C 6.897 0.496 11
X4C C18 C 8.783 2.379 12
X4C C9 C 15.237 -0.803 13
X4C C7 C 15.243 -2.295 14
X4C C1 C 9.192 -0.254 15
X4C C2 C 12.942 -1.553 16
X4C C21 C 14.624 -5.230 17
X4C C14 C 13.508 -4.228 18
X4C C22 C 16.050 -4.764 19
X4C C20 C 3.000 -1.754 20
X4C C28 C 16.447 0.083 21
X4C C11 C 10.692 -0.254 22
X4C C13 C 11.442 -1.553 23
X4C N4 N 8.316 -1.462 24
X4C N3 N 13.817 -0.346 25
X4C N19 N 16.359 -3.296 26
X4C N5 N 8.316 0.953 27
X4C N6 N 13.817 -2.761 28
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
X4C C17 C15 DOUBLE NONE 1
X4C C17 C16 SINGLE NONE 2
X4C C15 C10 SINGLE NONE 3
X4C C20 C16 SINGLE NONE 4
X4C C26 C25 DOUBLE NONE 5
X4C C26 C27 SINGLE NONE 6
X4C C25 C24 SINGLE NONE 7
X4C C16 C12 DOUBLE NONE 8
X4C C27 C18 DOUBLE NONE 9
X4C C24 C23 DOUBLE NONE 10
X4C C10 N5 SINGLE NONE 11
X4C C10 C8 DOUBLE NONE 12
X4C C18 C23 SINGLE NONE 13
X4C C18 N5 SINGLE NONE 14
X4C C12 C8 SINGLE NONE 15
X4C N5 C1 SINGLE NONE 16
X4C C8 N4 SINGLE NONE 17
X4C C1 N4 DOUBLE NONE 18
X4C C1 C11 SINGLE NONE 19
X4C C11 C13 SINGLE NONE 20
X4C C21 C14 DOUBLE NONE 21
X4C C21 C22 SINGLE NONE 22
X4C C14 N6 SINGLE NONE 23
X4C C13 C2 SINGLE NONE 24
X4C N6 C2 SINGLE NONE 25
X4C N6 C7 SINGLE NONE 26
X4C C22 N19 DOUBLE NONE 27
X4C C2 N3 DOUBLE NONE 28
X4C C7 N19 SINGLE NONE 29
X4C C7 C9 DOUBLE NONE 30
X4C N3 C9 SINGLE NONE 31
X4C C9 C28 SINGLE NONE 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
X4C MurckoScaffold S1 scaffold c1ccc(-n2c(CCc3ncc4ncccn34)nc3ccccc32)cc1 InChI=1S/C21H17N5/c1-2-7-16(8-3-1)26-18-10-5-4-9-17(18)24-20(26)12-11-19-23-15-21-22-13-6-14-25(19)21/h1-10,13-15H,11-12H2 NSPMHBDTUJRURK-UHFFFAOYSA-N
X4C benzimidazole F1 fragment 'c1ccc2[nH]cnc2c1' InChI=1S/C7H6N2/c1-2-4-7-6(3-1)8-5-9-7/h1-5H,(H,8,9) HYZJCKYKOHLVJF-UHFFFAOYSA-N
X4C imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
X4C phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
X4C pyrimidine F4 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
X4C C25 S1 1
X4C C24 S1 1
X4C C26 S1 1
X4C C17 S1 1
X4C C15 S1 1
X4C C23 S1 1
X4C C27 S1 1
X4C C12 S1 1
X4C C16 S1 1
X4C C8 S1 1
X4C C10 S1 1
X4C C18 S1 1
X4C C9 S1 1
X4C C7 S1 1
X4C C1 S1 1
X4C C2 S1 1
X4C C21 S1 1
X4C C14 S1 1
X4C C22 S1 1
X4C C11 S1 1
X4C C13 S1 1
X4C N4 S1 1
X4C N3 S1 1
X4C N19 S1 1
X4C N5 S1 1
X4C N6 S1 1
X4C C8 F1 1
X4C N4 F1 1
X4C C1 F1 1
X4C N5 F1 1
X4C C10 F1 1
X4C C15 F1 1
X4C C17 F1 1
X4C C16 F1 1
X4C C12 F1 1
X4C C8 F2 1
X4C C10 F2 1
X4C N5 F2 1
X4C C1 F2 1
X4C N4 F2 1
X4C C9 F2 2
X4C C7 F2 2
X4C N6 F2 2
X4C C2 F2 2
X4C N3 F2 2
X4C C25 F3 1
X4C C26 F3 1
X4C C27 F3 1
X4C C18 F3 1
X4C C23 F3 1
X4C C24 F3 1
X4C C17 F3 2
X4C C15 F3 2
X4C C10 F3 2
X4C C8 F3 2
X4C C12 F3 2
X4C C16 F3 2
X4C C21 F4 1
X4C C14 F4 1
X4C N6 F4 1
X4C C7 F4 1
X4C N19 F4 1
X4C C22 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id X4C
_pdbe_chem_comp_rdkit_properties.exactmw 367.180
_pdbe_chem_comp_rdkit_properties.amw 367.456
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 28
_pdbe_chem_comp_rdkit_properties.NumAtoms 49
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.174
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 192.388
_pdbe_chem_comp_rdkit_properties.tpsa 48.010
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.419
_pdbe_chem_comp_rdkit_properties.CrippenMR 105.905
_pdbe_chem_comp_rdkit_properties.chi0v 13.736
_pdbe_chem_comp_rdkit_properties.chi1v 7.683
_pdbe_chem_comp_rdkit_properties.chi2v 3.662
_pdbe_chem_comp_rdkit_properties.chi3v 3.662
_pdbe_chem_comp_rdkit_properties.chi4v 2.529
_pdbe_chem_comp_rdkit_properties.chi0n 34.736
_pdbe_chem_comp_rdkit_properties.chi1n 18.183
_pdbe_chem_comp_rdkit_properties.chi2n 3.662
_pdbe_chem_comp_rdkit_properties.chi3n 3.662
_pdbe_chem_comp_rdkit_properties.chi4n 2.529
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.470
_pdbe_chem_comp_rdkit_properties.kappa1 5.536
_pdbe_chem_comp_rdkit_properties.kappa2 6.603
_pdbe_chem_comp_rdkit_properties.kappa3 2.759
_pdbe_chem_comp_rdkit_properties.Phi 1.306
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
X4C UniChem ChEMBL CHEMBL3288410
X4C UniChem PDBe X4C
X4C UniChem ZINC ZINC000098209601
X4C UniChem PubChem 74049853
X4C UniChem BindingDb 50019115
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loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
X4C C25 0.568 2.368 -3.083 ETKDGv3 1
X4C C24 1.081 0.990 -3.230 ETKDGv3 2
X4C C26 0.481 2.924 -1.869 ETKDGv3 3
X4C C17 5.174 -1.399 0.006 ETKDGv3 4
X4C C15 4.193 -0.525 -0.281 ETKDGv3 5
X4C C23 1.459 0.297 -2.149 ETKDGv3 6
X4C C27 0.894 2.160 -0.673 ETKDGv3 7
X4C C12 3.822 -2.488 1.759 ETKDGv3 8
X4C C16 4.991 -2.425 1.084 ETKDGv3 9
X4C C8 2.773 -1.510 1.431 ETKDGv3 10
X4C C10 2.941 -0.612 0.489 ETKDGv3 11
X4C C18 1.359 0.906 -0.800 ETKDGv3 12
X4C C9 -4.861 -0.163 1.256 ETKDGv3 13
X4C C7 -4.678 0.543 0.154 ETKDGv3 14
X4C C1 0.900 -0.454 1.325 ETKDGv3 15
X4C C2 -2.832 -0.594 0.596 ETKDGv3 16
X4C C21 -3.528 2.248 -1.711 ETKDGv3 17
X4C C14 -2.790 1.218 -1.268 ETKDGv3 18
X4C C22 -4.924 2.445 -1.213 ETKDGv3 19
X4C C20 6.074 -3.424 1.356 ETKDGv3 20
X4C C28 -5.996 -0.006 2.214 ETKDGv3 21
X4C C11 -0.555 -0.129 1.480 ETKDGv3 22
X4C C13 -1.402 -1.038 0.586 ETKDGv3 23
X4C N4 1.458 -1.438 1.969 ETKDGv3 24
X4C N3 -3.660 -0.887 1.554 ETKDGv3 25
X4C N19 -5.448 1.650 -0.318 ETKDGv3 26
X4C N5 1.765 0.168 0.359 ETKDGv3 27
X4C N6 -3.394 0.300 -0.358 ETKDGv3 28
X4C H1 0.261 2.925 -3.959 ETKDGv3 29
X4C H2 1.148 0.543 -4.213 ETKDGv3 30
X4C H3 0.103 3.933 -1.758 ETKDGv3 31
X4C H4 6.102 -1.359 -0.550 ETKDGv3 32
X4C H5 4.320 0.219 -1.057 ETKDGv3 33
X4C H6 1.828 -0.715 -2.260 ETKDGv3 34
X4C H7 0.828 2.624 0.303 ETKDGv3 35
X4C H8 3.649 -3.238 2.521 ETKDGv3 36
X4C H9 -3.104 2.953 -2.414 ETKDGv3 37
X4C H10 -1.770 1.081 -1.598 ETKDGv3 38
X4C H11 -5.500 3.284 -1.579 ETKDGv3 39
X4C H12 7.058 -3.036 1.015 ETKDGv3 40
X4C H13 5.853 -4.367 0.814 ETKDGv3 41
X4C H14 6.145 -3.636 2.444 ETKDGv3 42
X4C H15 -5.821 0.883 2.855 ETKDGv3 43
X4C H16 -6.951 0.119 1.661 ETKDGv3 44
X4C H17 -6.070 -0.909 2.856 ETKDGv3 45
X4C H18 -0.730 0.936 1.218 ETKDGv3 46
X4C H19 -0.852 -0.268 2.542 ETKDGv3 47
X4C H20 -1.339 -2.087 0.950 ETKDGv3 48
X4C H21 -1.021 -1.013 -0.458 ETKDGv3 49
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