data_XTG
#
_chem_comp.id XTG
_chem_comp.name "4-NITROPHENYL 6-THIO-6-S-ALPHA-D-XYLOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C17 H23 N O11 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms 4-NITROPHENYL-(6-S-ALPHA-D-XYLOPYRANOSYL)-BETA-D-GLUCOPYRANOSIDE
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2005-11-17
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 449.430
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code XTG
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2F2H
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XTG C14 C14 C 0 1 Y N N N N N 141.386 60.115 132.666 -2.968 2.858 -1.182 C14 XTG 1
XTG C13 C13 C 0 1 Y N N N N N 141.337 58.728 132.666 -2.192 3.937 -0.805 C13 XTG 2
XTG C12 C12 C 0 1 Y N N N N N 142.467 57.986 132.327 -1.217 3.784 0.164 C12 XTG 3
XTG N1 N1 N 1 1 N N N N N N 142.446 56.630 132.306 -0.386 4.941 0.566 N1 XTG 4
XTG O10 O10 O -1 1 N N N N N N 143.604 55.992 131.815 -0.561 6.027 0.043 O10 XTG 5
XTG O11 O11 O 0 1 N N N N N N 141.318 55.826 132.756 0.472 4.807 1.419 O11 XTG 6
XTG C17 C17 C 0 1 Y N N N N N 143.630 58.674 131.972 -1.017 2.551 0.758 C17 XTG 7
XTG C16 C16 C 0 1 Y N N N N N 143.677 60.056 131.979 -1.795 1.471 0.388 C16 XTG 8
XTG C15 C15 C 0 1 Y N N N N N 142.550 60.789 132.331 -2.769 1.621 -0.588 C15 XTG 9
XTG O1 O1 O 0 1 N N N N N N 142.525 62.150 132.394 -3.532 0.558 -0.957 O1 XTG 10
XTG C1 C1 C 0 1 N N S N N N 143.790 62.849 132.701 -3.093 -0.556 -0.177 C1 XTG 11
XTG O5 O5 O 0 1 N N N N N N 144.605 62.295 133.747 -1.749 -0.879 -0.526 O5 XTG 12
XTG C2 C2 C 0 1 N N R N N N 143.523 64.313 133.103 -4.003 -1.756 -0.450 C2 XTG 13
XTG O2 O2 O 0 1 N N N N N N 142.728 64.901 132.113 -5.352 -1.418 -0.125 O2 XTG 14
XTG C3 C3 C 0 1 N N S N N N 144.833 65.072 133.241 -3.545 -2.936 0.414 C3 XTG 15
XTG O3 O3 O 0 1 N N N N N N 144.625 66.378 133.662 -4.289 -4.105 0.063 O3 XTG 16
XTG C4 C4 C 0 1 N N S N N N 145.681 64.286 134.193 -2.053 -3.178 0.163 C4 XTG 17
XTG O4 O4 O 0 1 N N N N N N 146.959 64.832 134.322 -1.571 -4.176 1.065 O4 XTG 18
XTG C5 C5 C 0 1 N N S N N N 145.842 62.930 133.562 -1.291 -1.870 0.391 C5 XTG 19
XTG C6 C6 C 0 1 N N N N N N 147.105 62.356 134.111 0.205 -2.109 0.177 C6 XTG 20
XTG S6 S6 S 0 1 N N N N N N 146.870 60.970 135.251 1.124 -0.602 0.595 S6 XTG 21
XTG C7 C7 C 0 1 N N R N N N 147.709 61.192 136.910 2.816 -1.161 0.257 C7 XTG 22
XTG O9 O9 O 0 1 N N N N N N 146.901 60.738 138.003 2.990 -1.324 -1.150 O9 XTG 23
XTG C11 C11 C 0 1 N N N N N N 146.778 59.287 138.082 4.264 -1.931 -1.360 C11 XTG 24
XTG C10 C10 C 0 1 N N R N N N 148.102 58.495 138.118 5.374 -0.955 -0.964 C10 XTG 25
XTG O8 O8 O 0 1 N N N N N N 147.775 57.096 137.888 5.259 0.241 -1.738 O8 XTG 26
XTG C9 C9 C 0 1 N N S N N N 149.079 59.022 137.036 5.238 -0.618 0.525 C9 XTG 27
XTG O7 O7 O 0 1 N N N N N N 150.365 58.339 137.141 5.491 -1.785 1.310 O7 XTG 28
XTG C8 C8 C 0 1 N N R N N N 149.120 60.582 137.112 3.809 -0.123 0.785 C8 XTG 29
XTG O6 O6 O 0 1 N N N N N N 149.997 61.292 136.208 3.603 1.121 0.112 O6 XTG 30
XTG H14 H14 H 0 1 N N N N N N 140.503 60.678 132.931 -3.729 2.979 -1.939 H14 XTG 31
XTG H13 H13 H 0 1 N N N N N N 140.420 58.222 132.930 -2.346 4.901 -1.267 H13 XTG 32
XTG H17 H17 H 0 1 N N N N N N 144.509 58.116 131.687 -0.255 2.434 1.514 H17 XTG 33
XTG H16 H16 H 0 1 N N N N N N 144.590 60.566 131.711 -1.638 0.508 0.852 H16 XTG 34
XTG H1 H1 H 0 1 N N N N N N 144.348 62.739 131.759 -3.141 -0.299 0.881 H1 XTG 35
XTG H2 H2 H 0 1 N N N N N N 143.007 64.346 134.074 -3.939 -2.030 -1.504 H2 XTG 36
XTG HO2 HO2 H 0 1 N N N N N N 141.850 65.034 132.449 -5.595 -0.669 -0.687 HO2 XTG 37
XTG H3 H3 H 0 1 N N N N N N 145.342 65.167 132.271 -3.707 -2.703 1.467 H3 XTG 38
XTG HO3 HO3 H 0 1 N N N N N N 144.577 66.402 134.611 -5.221 -3.903 0.225 HO3 XTG 39
XTG H4 H4 H 0 1 N N N N N N 145.210 64.271 135.187 -1.905 -3.513 -0.864 H4 XTG 40
XTG HO4 HO4 H 0 1 N N N N N N 147.339 64.956 133.460 -2.082 -4.978 0.893 HO4 XTG 41
XTG H5 H5 H 0 1 N N N N N N 146.010 62.854 132.478 -1.460 -1.526 1.412 H5 XTG 42
XTG H61 1H6 H 0 1 N N N N N N 147.591 63.158 134.686 0.386 -2.368 -0.866 H61 XTG 43
XTG H62 2H6 H 0 1 N N N N N N 147.707 61.996 133.264 0.538 -2.927 0.817 H62 XTG 44
XTG H7 H7 H 0 1 N N N N N N 147.843 62.284 136.901 2.990 -2.114 0.756 H7 XTG 45
XTG H111 1H11 H 0 0 N N N N N N 146.269 58.979 137.157 4.370 -2.193 -2.412 H111 XTG 46
XTG H112 2H11 H 0 0 N N N N N N 146.232 59.054 139.008 4.340 -2.832 -0.752 H112 XTG 47
XTG H10 H10 H 0 1 N N N N N N 148.602 58.615 139.090 6.346 -1.415 -1.146 H10 XTG 48
XTG HO8 HO8 H 0 1 N N N N N N 147.704 56.936 136.954 5.347 -0.017 -2.665 HO8 XTG 49
XTG H9 H9 H 0 1 N N N N N N 148.735 58.785 136.018 5.950 0.164 0.792 H9 XTG 50
XTG HO7 HO7 H 0 1 N N N N N N 150.717 58.191 136.271 6.398 -2.061 1.116 HO7 XTG 51
XTG H8 H8 H 0 1 N N N N N N 149.534 60.725 138.121 3.659 0.013 1.856 H8 XTG 52
XTG HO6 HO6 H 0 1 N N N N N N 149.547 61.448 135.386 2.693 1.392 0.297 HO6 XTG 53
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XTG C14 C13 DOUB Y N 1
XTG C14 C15 SING Y N 2
XTG C14 H14 SING N N 3
XTG C13 C12 SING Y N 4
XTG C13 H13 SING N N 5
XTG C12 N1 SING N N 6
XTG C12 C17 DOUB Y N 7
XTG N1 O10 SING N N 8
XTG N1 O11 DOUB N N 9
XTG C17 C16 SING Y N 10
XTG C17 H17 SING N N 11
XTG C16 C15 DOUB Y N 12
XTG C16 H16 SING N N 13
XTG C15 O1 SING N N 14
XTG O1 C1 SING N N 15
XTG C1 O5 SING N N 16
XTG C1 C2 SING N N 17
XTG C1 H1 SING N N 18
XTG O5 C5 SING N N 19
XTG C2 O2 SING N N 20
XTG C2 C3 SING N N 21
XTG C2 H2 SING N N 22
XTG O2 HO2 SING N N 23
XTG C3 O3 SING N N 24
XTG C3 C4 SING N N 25
XTG C3 H3 SING N N 26
XTG O3 HO3 SING N N 27
XTG C4 O4 SING N N 28
XTG C4 C5 SING N N 29
XTG C4 H4 SING N N 30
XTG O4 HO4 SING N N 31
XTG C5 C6 SING N N 32
XTG C5 H5 SING N N 33
XTG C6 S6 SING N N 34
XTG C6 H61 SING N N 35
XTG C6 H62 SING N N 36
XTG S6 C7 SING N N 37
XTG C7 O9 SING N N 38
XTG C7 C8 SING N N 39
XTG C7 H7 SING N N 40
XTG O9 C11 SING N N 41
XTG C11 C10 SING N N 42
XTG C11 H111 SING N N 43
XTG C11 H112 SING N N 44
XTG C10 O8 SING N N 45
XTG C10 C9 SING N N 46
XTG C10 H10 SING N N 47
XTG O8 HO8 SING N N 48
XTG C9 O7 SING N N 49
XTG C9 C8 SING N N 50
XTG C9 H9 SING N N 51
XTG O7 HO7 SING N N 52
XTG C8 O6 SING N N 53
XTG C8 H8 SING N N 54
XTG O6 HO6 SING N N 55
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XTG SMILES ACDLabs 10.04 "[O-][N+](=O)c3ccc(OC2OC(CSC1OCC(O)C(O)C1O)C(O)C(O)C2O)cc3"
XTG SMILES_CANONICAL CACTVS 3.341 O[C@@H]1CO[C@H](SC[C@H]2O[C@@H](Oc3ccc(cc3)[N+]([O-])=O)[C@H](O)[C@@H](O)[C@@H]2O)[C@H](O)[C@H]1O
XTG SMILES CACTVS 3.341 O[CH]1CO[CH](SC[CH]2O[CH](Oc3ccc(cc3)[N+]([O-])=O)[CH](O)[CH](O)[CH]2O)[CH](O)[CH]1O
XTG SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1cc(ccc1[N+](=O)[O-])O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CS[C@@H]3[C@@H]([C@H]([C@@H](CO3)O)O)O)O)O)O
XTG SMILES "OpenEye OEToolkits" 1.5.0 c1cc(ccc1[N+](=O)[O-])OC2C(C(C(C(O2)CSC3C(C(C(CO3)O)O)O)O)O)O
XTG InChI InChI 1.03 InChI=1S/C17H23NO11S/c19-9-5-27-17(15(24)11(9)20)30-6-10-12(21)13(22)14(23)16(29-10)28-8-3-1-7(2-4-8)18(25)26/h1-4,9-17,19-24H,5-6H2/t9-,10-,11+,12-,13+,14-,15-,16-,17-/m1/s1
XTG InChIKey InChI 1.03 HQYVHBCTLFPWRQ-ZMFOIVQCSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XTG "SYSTEMATIC NAME" ACDLabs 10.04 "4-nitrophenyl 6-thio-6-S-alpha-D-xylopyranosyl-beta-D-glucopyranoside"
XTG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (2S,3R,4S,5S,6S)-2-(4-nitrophenoxy)-6-[[(2R,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]sulfanylmethyl]oxane-3,4,5-triol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XTG 'Create component' 2005-11-17 RCSB
XTG 'Modify descriptor' 2011-06-04 RCSB
XTG 'Modify synonyms' 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id XTG
_pdbx_chem_comp_synonyms.name 4-NITROPHENYL-(6-S-ALPHA-D-XYLOPYRANOSYL)-BETA-D-GLUCOPYRANOSIDE
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id XTG
_pdbe_chem_comp_drugbank_details.drugbank_id DB04807
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 4-NITROPHENYL-(6-S-ALPHA-D-XYLOPYRANOSYL)-BETA-D-GLUCOPYRANOSIDE
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id XTG
_pdbe_chem_comp_synonyms.name 4-NITROPHENYL-(6-S-ALPHA-D-XYLOPYRANOSYL)-BETA-D-GLUCOPYRANOSIDE
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id XTG
_pdbe_chem_comp_drugbank_classification.drugbank_id DB04807
_pdbe_chem_comp_drugbank_classification.parent 'Phenolic glycosides'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organooxygen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic oxygen compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose.'
#
_pdbe_chem_comp_drugbank_targets.comp_id XTG
_pdbe_chem_comp_drugbank_targets.drugbank_id DB04807
_pdbe_chem_comp_drugbank_targets.name Alpha-xylosidase
_pdbe_chem_comp_drugbank_targets.organism 'Escherichia coli (strain K12)'
_pdbe_chem_comp_drugbank_targets.uniprot_id P31434
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
XTG C14 C 15.497 1.357 1
XTG C13 C 15.497 2.857 2
XTG C12 C 14.198 3.607 3
XTG N1 N 14.198 5.107 4
XTG O10 O 15.497 5.857 5
XTG O11 O 12.899 5.857 6
XTG C17 C 12.899 2.857 7
XTG C16 C 12.899 1.357 8
XTG C15 C 14.198 0.608 9
XTG O1 O 14.198 -0.892 10
XTG C1 C 12.899 -1.643 11
XTG O5 O 11.600 -0.892 12
XTG C2 C 12.899 -3.143 13
XTG O2 O 14.198 -3.893 14
XTG C3 C 11.600 -3.893 15
XTG O3 O 11.600 -5.393 16
XTG C4 C 10.301 -3.143 17
XTG O4 O 9.002 -3.893 18
XTG C5 C 10.301 -1.643 19
XTG C6 C 9.002 -0.892 20
XTG S6 S 9.002 0.608 21
XTG C7 C 7.702 1.357 22
XTG O9 O 6.404 0.608 23
XTG C11 C 5.104 1.357 24
XTG C10 C 5.104 2.857 25
XTG O8 O 3.805 3.607 26
XTG C9 C 6.404 3.607 27
XTG O7 O 6.404 5.107 28
XTG C8 C 7.702 2.857 29
XTG O6 O 9.002 3.607 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
XTG C14 C13 DOUBLE NONE 1
XTG C14 C15 SINGLE NONE 2
XTG C13 C12 SINGLE NONE 3
XTG C12 N1 SINGLE NONE 4
XTG C12 C17 DOUBLE NONE 5
XTG N1 O10 SINGLE NONE 6
XTG N1 O11 DOUBLE NONE 7
XTG C17 C16 SINGLE NONE 8
XTG C16 C15 DOUBLE NONE 9
XTG C15 O1 SINGLE NONE 10
XTG C1 O1 SINGLE BEGINWEDGE 11
XTG C1 O5 SINGLE NONE 12
XTG C1 C2 SINGLE NONE 13
XTG O5 C5 SINGLE NONE 14
XTG C2 O2 SINGLE BEGINDASH 15
XTG C2 C3 SINGLE NONE 16
XTG C3 O3 SINGLE BEGINWEDGE 17
XTG C3 C4 SINGLE NONE 18
XTG C4 O4 SINGLE BEGINDASH 19
XTG C4 C5 SINGLE NONE 20
XTG C5 C6 SINGLE BEGINWEDGE 21
XTG C6 S6 SINGLE NONE 22
XTG C7 S6 SINGLE BEGINWEDGE 23
XTG C7 O9 SINGLE NONE 24
XTG C7 C8 SINGLE NONE 25
XTG O9 C11 SINGLE NONE 26
XTG C11 C10 SINGLE NONE 27
XTG C10 O8 SINGLE BEGINWEDGE 28
XTG C10 C9 SINGLE NONE 29
XTG C9 O7 SINGLE BEGINDASH 30
XTG C9 C8 SINGLE NONE 31
XTG C8 O6 SINGLE BEGINWEDGE 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
XTG MurckoScaffold S1 scaffold 'c1ccc(O[C@H]2CCC[C@@H](CS[C@@H]3CCCCO3)O2)cc1' InChI=1S/C17H24O3S/c1-2-7-14(8-3-1)19-16-10-6-9-15(20-16)13-21-17-11-4-5-12-18-17/h1-3,7-8,15-17H,4-6,9-13H2/t15-,16+,17+/m0/s1 VLIPJLUJLKXJRD-GVDBMIGSSA-N
XTG phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
XTG pyranose F2 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
XTG C14 S1 1
XTG C13 S1 1
XTG C12 S1 1
XTG C17 S1 1
XTG C16 S1 1
XTG C15 S1 1
XTG O1 S1 1
XTG C1 S1 1
XTG O5 S1 1
XTG C2 S1 1
XTG C3 S1 1
XTG C4 S1 1
XTG C5 S1 1
XTG C6 S1 1
XTG S6 S1 1
XTG C7 S1 1
XTG O9 S1 1
XTG C11 S1 1
XTG C10 S1 1
XTG C9 S1 1
XTG C8 S1 1
XTG C14 F1 1
XTG C13 F1 1
XTG C12 F1 1
XTG C17 F1 1
XTG C16 F1 1
XTG C15 F1 1
XTG C4 F2 1
XTG C5 F2 1
XTG O5 F2 1
XTG C1 F2 1
XTG C2 F2 1
XTG C3 F2 1
XTG O1 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id XTG
_pdbe_chem_comp_rdkit_properties.exactmw 449.099
_pdbe_chem_comp_rdkit_properties.amw 449.434
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 12
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 12
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 53
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.647
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 9
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 207.151
_pdbe_chem_comp_rdkit_properties.tpsa 192.210
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.890
_pdbe_chem_comp_rdkit_properties.CrippenMR 99.190
_pdbe_chem_comp_rdkit_properties.chi0v 14.663
_pdbe_chem_comp_rdkit_properties.chi1v 8.013
_pdbe_chem_comp_rdkit_properties.chi2v 3.777
_pdbe_chem_comp_rdkit_properties.chi3v 3.777
_pdbe_chem_comp_rdkit_properties.chi4v 2.278
_pdbe_chem_comp_rdkit_properties.chi0n 36.846
_pdbe_chem_comp_rdkit_properties.chi1n 18.146
_pdbe_chem_comp_rdkit_properties.chi2n 3.036
_pdbe_chem_comp_rdkit_properties.chi3n 3.036
_pdbe_chem_comp_rdkit_properties.chi4n 1.689
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.550
_pdbe_chem_comp_rdkit_properties.kappa1 7.504
_pdbe_chem_comp_rdkit_properties.kappa2 9.720
_pdbe_chem_comp_rdkit_properties.kappa3 5.015
_pdbe_chem_comp_rdkit_properties.Phi 2.431
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
XTG UniChem DrugBank DB04807
XTG UniChem PDBe XTG
XTG UniChem ZINC ZINC000012504521
XTG UniChem 'PubChem TPHARMA' 16619970
XTG UniChem 'Probes And Drugs' PD006375
XTG UniChem PubChem 6102810
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
XTG C14 4.665 1.142 -0.769 ETKDGv3 1
XTG C13 5.818 1.785 -0.990 ETKDGv3 2
XTG C12 6.514 2.492 0.114 ETKDGv3 3
XTG N1 7.754 3.178 -0.138 ETKDGv3 4
XTG O10 8.299 3.182 -1.401 ETKDGv3 5
XTG O11 8.354 3.779 0.778 ETKDGv3 6
XTG C17 5.965 2.477 1.343 ETKDGv3 7
XTG C16 4.692 1.768 1.587 ETKDGv3 8
XTG C15 4.064 1.125 0.594 ETKDGv3 9
XTG O1 2.855 0.472 0.889 ETKDGv3 10
XTG C1 2.104 -0.357 -0.000 ETKDGv3 11
XTG O5 0.766 -0.382 0.464 ETKDGv3 12
XTG C2 2.681 -1.788 0.011 ETKDGv3 13
XTG O2 4.000 -1.778 -0.468 ETKDGv3 14
XTG C3 1.815 -2.703 -0.871 ETKDGv3 15
XTG O3 2.240 -4.033 -0.717 ETKDGv3 16
XTG C4 0.333 -2.578 -0.478 ETKDGv3 17
XTG O4 -0.445 -3.275 -1.418 ETKDGv3 18
XTG C5 -0.072 -1.082 -0.441 ETKDGv3 19
XTG C6 -1.527 -0.893 0.024 ETKDGv3 20
XTG S6 -2.714 -1.209 -1.338 ETKDGv3 21
XTG C7 -4.243 -0.597 -0.524 ETKDGv3 22
XTG O9 -4.202 -0.842 0.879 ETKDGv3 23
XTG C11 -5.043 0.007 1.651 ETKDGv3 24
XTG C10 -6.293 0.504 0.905 ETKDGv3 25
XTG O8 -7.079 1.275 1.776 ETKDGv3 26
XTG C9 -5.872 1.343 -0.326 ETKDGv3 27
XTG O7 -6.878 1.307 -1.308 ETKDGv3 28
XTG C8 -4.510 0.878 -0.907 ETKDGv3 29
XTG O6 -3.474 1.690 -0.415 ETKDGv3 30
XTG H14 4.189 0.641 -1.598 ETKDGv3 31
XTG H13 6.239 1.784 -1.987 ETKDGv3 32
XTG H17 6.442 2.982 2.173 ETKDGv3 33
XTG H16 4.270 1.771 2.584 ETKDGv3 34
XTG H1 2.132 0.079 -1.024 ETKDGv3 35
XTG H2 2.661 -2.161 1.063 ETKDGv3 36
XTG HO2 4.438 -2.601 -0.127 ETKDGv3 37
XTG H3 1.941 -2.384 -1.935 ETKDGv3 38
XTG HO3 1.921 -4.532 -1.514 ETKDGv3 39
XTG H4 0.208 -3.014 0.543 ETKDGv3 40
XTG HO4 -1.160 -3.746 -0.917 ETKDGv3 41
XTG H5 0.014 -0.640 -1.462 ETKDGv3 42
XTG H61 -1.655 0.152 0.372 ETKDGv3 43
XTG H62 -1.744 -1.567 0.880 ETKDGv3 44
XTG H7 -5.064 -1.212 -0.953 ETKDGv3 45
XTG H111 -5.369 -0.558 2.550 ETKDGv3 46
XTG H112 -4.449 0.875 2.012 ETKDGv3 47
XTG H10 -6.870 -0.396 0.585 ETKDGv3 48
XTG HO8 -7.967 1.374 1.344 ETKDGv3 49
XTG H9 -5.769 2.404 -0.006 ETKDGv3 50
XTG HO7 -6.938 0.375 -1.644 ETKDGv3 51
XTG H8 -4.534 0.950 -2.021 ETKDGv3 52
XTG HO6 -3.504 2.538 -0.930 ETKDGv3 53
#