data_Y27
#
_chem_comp.id Y27
_chem_comp.name "(R)-TRANS-4-(1-AMINOETHYL)-N-(4-PYRIDYL) CYCLOHEXANECARBOXAMIDE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C14 H21 N3 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2003-08-25
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 247.336
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code Y27
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1Q8T
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Y27 O23 O23 O 0 1 N N N N N N 7.567 9.649 1.659 -1.534 0.114 -1.215 O23 Y27 1
Y27 C22 C22 C 0 1 N N N N N N 7.985 9.482 2.808 -0.420 0.354 -0.801 C22 Y27 2
Y27 C31 C31 C 0 1 N N N N N N 9.390 9.033 3.122 -0.190 0.551 0.675 C31 Y27 3
Y27 C36 C36 C 0 1 N N N N N N 9.802 7.926 2.147 -1.517 0.396 1.422 C36 Y27 4
Y27 C35 C35 C 0 1 N N N N N N 11.177 7.372 2.533 -1.284 0.596 2.921 C35 Y27 5
Y27 C34 C34 C 0 1 N N N N N N 12.191 8.500 2.307 -0.290 -0.450 3.426 C34 Y27 6
Y27 C33 C33 C 0 1 N N N N N N 11.885 9.672 3.277 1.036 -0.296 2.679 C33 Y27 7
Y27 C32 C32 C 0 1 N N N N N N 10.410 10.189 3.138 0.803 -0.495 1.180 C32 Y27 8
Y27 C41 C41 C 0 1 N N R N N N 13.635 7.916 2.377 -0.057 -0.250 4.925 C41 Y27 9
Y27 C42 C42 C 0 1 N N N N N N 14.009 7.234 1.048 0.937 -1.297 5.431 C42 Y27 10
Y27 N43 N43 N 0 1 N N N N N N 14.651 8.984 2.688 0.484 1.093 5.162 N43 Y27 11
Y27 N21 N21 N 0 1 N N N N N N 7.175 9.668 3.963 0.613 0.445 -1.661 N21 Y27 12
Y27 C14 C14 C 0 1 Y N N N N N 5.735 9.742 4.010 0.424 0.151 -3.012 C14 Y27 13
Y27 C15 C15 C 0 1 Y N N N N N 5.165 9.693 5.293 -0.492 -0.820 -3.411 C15 Y27 14
Y27 C16 C16 C 0 1 Y N N N N N 3.770 9.746 5.348 -0.652 -1.077 -4.757 C16 Y27 15
Y27 N11 N11 N 0 1 Y N N N N N 3.010 9.854 4.238 0.055 -0.425 -5.660 N11 Y27 16
Y27 C12 C12 C 0 1 Y N N N N N 3.541 9.901 3.006 0.936 0.496 -5.322 C12 Y27 17
Y27 C13 C13 C 0 1 Y N N N N N 4.918 9.844 2.847 1.152 0.816 -3.997 C13 Y27 18
Y27 H31 H31 H 0 1 N N N N N N 9.391 8.629 4.161 0.211 1.548 0.850 H31 Y27 19
Y27 H361 1H36 H 0 0 N N N N N N 9.773 8.271 1.087 -1.919 -0.601 1.246 H361 Y27 20
Y27 H362 2H36 H 0 0 N N N N N N 9.032 7.122 2.078 -2.225 1.142 1.062 H362 Y27 21
Y27 H351 1H35 H 0 0 N N N N N N 11.439 6.432 1.993 -2.229 0.486 3.453 H351 Y27 22
Y27 H352 2H35 H 0 0 N N N N N N 11.208 6.955 3.567 -0.882 1.594 3.096 H352 Y27 23
Y27 H34 H34 H 0 1 N N N N N N 12.107 8.943 1.287 -0.692 -1.448 3.251 H34 Y27 24
Y27 H331 1H33 H 0 0 N N N N N N 12.617 10.503 3.148 1.438 0.701 2.855 H331 Y27 25
Y27 H332 2H33 H 0 0 N N N N N N 12.117 9.393 4.332 1.745 -1.042 3.040 H332 Y27 26
Y27 H321 1H32 H 0 0 N N N N N N 10.166 10.933 3.932 0.401 -1.493 1.005 H321 Y27 27
Y27 H322 2H32 H 0 0 N N N N N N 10.294 10.843 2.243 1.748 -0.386 0.648 H322 Y27 28
Y27 H41 H41 H 0 1 N N N N N N 13.645 7.164 3.200 -1.002 -0.360 5.457 H41 Y27 29
Y27 H421 1H42 H 0 0 N N N N N N 13.883 7.922 0.180 1.882 -1.187 4.899 H421 Y27 30
Y27 H422 2H42 H 0 0 N N N N N N 15.042 6.816 1.098 0.535 -2.295 5.255 H422 Y27 31
Y27 H423 3H42 H 0 0 N N N N N N 13.263 6.459 0.756 1.103 -1.155 6.499 H423 Y27 32
Y27 H431 1H43 H 0 0 N N N N N N 14.412 9.489 3.541 1.354 1.149 4.653 H431 Y27 33
Y27 H432 2H43 H 0 0 N N N N N N 15.596 8.602 2.734 -0.150 1.743 4.723 H432 Y27 34
Y27 H21 H21 H 0 1 N N N N N N 7.677 9.757 4.846 1.488 0.714 -1.341 H21 Y27 35
Y27 H15 H15 H 0 1 N N N N N N 5.779 9.617 6.206 -1.074 -1.357 -2.677 H15 Y27 36
Y27 H16 H16 H 0 1 N N N N N N 3.243 9.700 6.316 -1.364 -1.825 -5.075 H16 Y27 37
Y27 H12 H12 H 0 1 N N N N N N 2.860 9.985 2.142 1.495 1.007 -6.092 H12 Y27 38
Y27 H13 H13 H 0 1 N N N N N N 5.348 9.879 1.832 1.874 1.573 -3.727 H13 Y27 39
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Y27 O23 C22 DOUB N N 1
Y27 C22 C31 SING N N 2
Y27 C22 N21 SING N N 3
Y27 C31 C36 SING N N 4
Y27 C31 C32 SING N N 5
Y27 C31 H31 SING N N 6
Y27 C36 C35 SING N N 7
Y27 C36 H361 SING N N 8
Y27 C36 H362 SING N N 9
Y27 C35 C34 SING N N 10
Y27 C35 H351 SING N N 11
Y27 C35 H352 SING N N 12
Y27 C34 C33 SING N N 13
Y27 C34 C41 SING N N 14
Y27 C34 H34 SING N N 15
Y27 C33 C32 SING N N 16
Y27 C33 H331 SING N N 17
Y27 C33 H332 SING N N 18
Y27 C32 H321 SING N N 19
Y27 C32 H322 SING N N 20
Y27 C41 C42 SING N N 21
Y27 C41 N43 SING N N 22
Y27 C41 H41 SING N N 23
Y27 C42 H421 SING N N 24
Y27 C42 H422 SING N N 25
Y27 C42 H423 SING N N 26
Y27 N43 H431 SING N N 27
Y27 N43 H432 SING N N 28
Y27 N21 C14 SING N N 29
Y27 N21 H21 SING N N 30
Y27 C14 C15 DOUB Y N 31
Y27 C14 C13 SING Y N 32
Y27 C15 C16 SING Y N 33
Y27 C15 H15 SING N N 34
Y27 C16 N11 DOUB Y N 35
Y27 C16 H16 SING N N 36
Y27 N11 C12 SING Y N 37
Y27 C12 C13 DOUB Y N 38
Y27 C12 H12 SING N N 39
Y27 C13 H13 SING N N 40
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Y27 SMILES ACDLabs 10.04 O=C(Nc1ccncc1)C2CCC(C(N)C)CC2
Y27 SMILES_CANONICAL CACTVS 3.341 C[C@@H](N)[C@H]1CC[C@@H](CC1)C(=O)Nc2ccncc2
Y27 SMILES CACTVS 3.341 C[CH](N)[CH]1CC[CH](CC1)C(=O)Nc2ccncc2
Y27 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C[C@H](C1CCC(CC1)C(=O)Nc2ccncc2)N
Y27 SMILES "OpenEye OEToolkits" 1.5.0 CC(C1CCC(CC1)C(=O)Nc2ccncc2)N
Y27 InChI InChI 1.03 InChI=1S/C14H21N3O/c1-10(15)11-2-4-12(5-3-11)14(18)17-13-6-8-16-9-7-13/h6-12H,2-5,15H2,1H3,(H,16,17,18)/t10-,11-,12-/m1/s1
Y27 InChIKey InChI 1.03 IYOZTVGMEWJPKR-IJLUTSLNSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Y27 "SYSTEMATIC NAME" ACDLabs 10.04 trans-4-[(1R)-1-aminoethyl]-N-pyridin-4-ylcyclohexanecarboxamide
Y27 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 4-[(1R)-1-aminoethyl]-N-pyridin-4-yl-cyclohexane-1-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Y27 'Create component' 2003-08-25 EBI
Y27 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id Y27
_pdbe_chem_comp_drugbank_details.drugbank_id DB08756
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Y-27632
_pdbe_chem_comp_drugbank_details.description
'Y-27632 is an inhibitor of Rho-associated protein kinase. It inhibits calcium sensitization to affect smooth muscle relaxation.'
_pdbe_chem_comp_drugbank_details.cas_number 146986-50-7
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
Y27 Y-27632 ChEMBL 'Research Code'
Y27 (R)-(+)-trans-N-(4-pyridyl)-4-(1-aminoethyl)-cyclohexanecarboxamide DrugBank ?
Y27 '4-[(1R)-1-aminoethyl]-N-(pyridin-4-yl)cyclohexane-1-carboxamide' DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id Y27
_pdbe_chem_comp_drugbank_classification.drugbank_id DB08756
_pdbe_chem_comp_drugbank_classification.parent N-arylamides
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organonitrogen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic nitrogen compounds'
_pdbe_chem_comp_drugbank_classification.description
"This compound belongs to the class of organic compounds known as n-arylamides. These are organic compounds that contain a carboxamide group that is N-linked to a aryl group. They have the generic structure RC(=O)N(R')H, R = organyl group and R'= aryl group."
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
Y27 DB08756 'cAMP-dependent protein kinase catalytic subunit alpha' Humans P17612 unknown 1
Y27 DB08756 'cAMP-dependent protein kinase inhibitor alpha' Humans P61925 unknown 2
Y27 DB08756 'Rho-associated protein kinase 1' Humans Q13464 unknown 3
Y27 DB08756 'Rho-associated protein kinase 2' Humans O75116 unknown 4
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
Y27 O23 O 0.425 2.251 1
Y27 C22 C 0.430 0.751 2
Y27 C31 C -0.866 -0.003 3
Y27 C36 C -2.168 0.742 4
Y27 C35 C -3.464 -0.012 5
Y27 C34 C -3.459 -1.512 6
Y27 C33 C -2.157 -2.258 7
Y27 C32 C -0.861 -1.503 8
Y27 C41 C -4.755 -2.267 9
Y27 C42 C -4.750 -3.767 10
Y27 N43 N -6.057 -1.522 11
Y27 N21 N 1.732 0.006 12
Y27 C14 C 3.028 0.761 13
Y27 C15 C 4.330 0.015 14
Y27 C16 C 5.626 0.770 15
Y27 N11 N 5.621 2.270 16
Y27 C12 C 4.319 3.015 17
Y27 C13 C 3.023 2.261 18
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
Y27 O23 C22 DOUBLE NONE 1
Y27 C31 C22 SINGLE BEGINDASH 2
Y27 C22 N21 SINGLE NONE 3
Y27 C31 C36 SINGLE NONE 4
Y27 C31 C32 SINGLE NONE 5
Y27 C36 C35 SINGLE NONE 6
Y27 C34 C35 SINGLE BEGINWEDGE 7
Y27 C34 C33 SINGLE NONE 8
Y27 C34 C41 SINGLE NONE 9
Y27 C33 C32 SINGLE NONE 10
Y27 C41 C42 SINGLE BEGINWEDGE 11
Y27 C41 N43 SINGLE NONE 12
Y27 N21 C14 SINGLE NONE 13
Y27 C14 C15 DOUBLE NONE 14
Y27 C14 C13 SINGLE NONE 15
Y27 C15 C16 SINGLE NONE 16
Y27 C16 N11 DOUBLE NONE 17
Y27 N11 C12 SINGLE NONE 18
Y27 C12 C13 DOUBLE NONE 19
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
Y27 MurckoScaffold S1 scaffold O=C(Nc1ccncc1)C1CCCCC1 InChI=1S/C12H16N2O/c15-12(10-4-2-1-3-5-10)14-11-6-8-13-9-7-11/h6-10H,1-5H2,(H,13,14,15) ZRCHIRBBTSZVMC-UHFFFAOYSA-N
Y27 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
Y27 cyclohexane F2 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
Y27 pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
Y27 O23 S1 1
Y27 C22 S1 1
Y27 C31 S1 1
Y27 C36 S1 1
Y27 C35 S1 1
Y27 C34 S1 1
Y27 C33 S1 1
Y27 C32 S1 1
Y27 N21 S1 1
Y27 C14 S1 1
Y27 C15 S1 1
Y27 C16 S1 1
Y27 N11 S1 1
Y27 C12 S1 1
Y27 C13 S1 1
Y27 N21 F1 1
Y27 C22 F1 1
Y27 O23 F1 1
Y27 C31 F1 1
Y27 C31 F2 1
Y27 C36 F2 1
Y27 C35 F2 1
Y27 C34 F2 1
Y27 C33 F2 1
Y27 C32 F2 1
Y27 C16 F3 1
Y27 C15 F3 1
Y27 C14 F3 1
Y27 C13 F3 1
Y27 C12 F3 1
Y27 N11 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id Y27
_pdbe_chem_comp_rdkit_properties.exactmw 247.168
_pdbe_chem_comp_rdkit_properties.amw 247.342
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 18
_pdbe_chem_comp_rdkit_properties.NumAtoms 39
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.571
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 137.660
_pdbe_chem_comp_rdkit_properties.tpsa 68.010
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.793
_pdbe_chem_comp_rdkit_properties.CrippenMR 71.140
_pdbe_chem_comp_rdkit_properties.chi0v 8.750
_pdbe_chem_comp_rdkit_properties.chi1v 4.572
_pdbe_chem_comp_rdkit_properties.chi2v 1.749
_pdbe_chem_comp_rdkit_properties.chi3v 1.749
_pdbe_chem_comp_rdkit_properties.chi4v 0.972
_pdbe_chem_comp_rdkit_properties.chi0n 29.750
_pdbe_chem_comp_rdkit_properties.chi1n 14.914
_pdbe_chem_comp_rdkit_properties.chi2n 1.749
_pdbe_chem_comp_rdkit_properties.chi3n 1.749
_pdbe_chem_comp_rdkit_properties.chi4n 0.972
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.420
_pdbe_chem_comp_rdkit_properties.kappa1 2.704
_pdbe_chem_comp_rdkit_properties.kappa2 5.957
_pdbe_chem_comp_rdkit_properties.kappa3 3.292
_pdbe_chem_comp_rdkit_properties.Phi 0.895
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
Y27 UniChem ChEMBL CHEMBL559147
Y27 UniChem DrugBank DB08756
Y27 UniChem PDBe Y27
Y27 UniChem 'Guide to Pharmacology' 5290
Y27 UniChem ChEBI 75393
Y27 UniChem fdasrs 0X370ROP6H
Y27 UniChem ACTor 146986-50-7
Y27 UniChem MedChemExpress HY-10071
Y27 UniChem 'Probes And Drugs' PD004560
Y27 UniChem SureChEMBL SCHEMBL598993
Y27 UniChem 'PubChem TPHARMA' 14798541
Y27 UniChem 'PubChem TPHARMA' 14847630
Y27 UniChem LINCS LSM-44936
Y27 UniChem Nikkaji J888.082D
Y27 UniChem BindingDb 14029
Y27 UniChem BindingDb 50319631
Y27 UniChem BindingDb 86729
Y27 UniChem 'EPA CompTox Dashboard' DTXSID7043740
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
Y27 O23 1.607 0.327 1.101 ETKDGv3 1
Y27 C22 1.471 0.190 -0.146 ETKDGv3 2
Y27 C31 0.094 -0.031 -0.725 ETKDGv3 3
Y27 C36 -0.475 -1.393 -0.257 ETKDGv3 4
Y27 C35 -2.006 -1.394 -0.285 ETKDGv3 5
Y27 C34 -2.574 -0.368 0.731 ETKDGv3 6
Y27 C33 -1.703 0.918 0.842 ETKDGv3 7
Y27 C32 -0.845 1.163 -0.408 ETKDGv3 8
Y27 C41 -4.087 -0.065 0.512 ETKDGv3 9
Y27 C42 -4.383 0.719 -0.778 ETKDGv3 10
Y27 N43 -4.861 -1.309 0.519 ETKDGv3 11
Y27 N21 2.612 0.285 -1.016 ETKDGv3 12
Y27 C14 3.976 0.253 -0.564 ETKDGv3 13
Y27 C15 4.362 -0.510 0.475 ETKDGv3 14
Y27 C16 5.783 -0.531 0.875 ETKDGv3 15
Y27 N11 6.659 0.167 0.213 ETKDGv3 16
Y27 C12 6.280 0.972 -0.916 ETKDGv3 17
Y27 C13 5.001 1.022 -1.307 ETKDGv3 18
Y27 H31 0.187 -0.079 -1.833 ETKDGv3 19
Y27 H361 -0.093 -2.201 -0.918 ETKDGv3 20
Y27 H362 -0.145 -1.630 0.780 ETKDGv3 21
Y27 H351 -2.374 -2.412 -0.032 ETKDGv3 22
Y27 H352 -2.336 -1.168 -1.320 ETKDGv3 23
Y27 H34 -2.508 -0.858 1.729 ETKDGv3 24
Y27 H331 -1.020 0.821 1.715 ETKDGv3 25
Y27 H332 -2.330 1.814 1.043 ETKDGv3 26
Y27 H321 -1.520 1.329 -1.275 ETKDGv3 27
Y27 H322 -0.262 2.102 -0.280 ETKDGv3 28
Y27 H41 -4.431 0.565 1.365 ETKDGv3 29
Y27 H421 -5.467 0.956 -0.829 ETKDGv3 30
Y27 H422 -4.123 0.132 -1.682 ETKDGv3 31
Y27 H423 -3.837 1.684 -0.796 ETKDGv3 32
Y27 H431 -4.720 -1.782 1.442 ETKDGv3 33
Y27 H432 -5.878 -1.069 0.476 ETKDGv3 34
Y27 H21 2.442 0.483 -2.028 ETKDGv3 35
Y27 H15 3.658 -1.134 1.009 ETKDGv3 36
Y27 H16 6.099 -1.132 1.717 ETKDGv3 37
Y27 H12 7.034 1.535 -1.451 ETKDGv3 38
Y27 H13 4.718 1.628 -2.159 ETKDGv3 39
#