data_YT0
#
_chem_comp.id YT0
_chem_comp.name
"[1-{5-methyl-2-[(3-methyl-1,2-thiazol-5-yl)amino]pyrimidin-4-yl}-3-(4-methylpiperazin-1-yl)azetidin-3-yl]acetonitrile"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H26 N8 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2023-02-20
_chem_comp.pdbx_modified_date 2023-06-16
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 398.528
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code YT0
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8G8O
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YT0 C1 C1 C 0 1 N N N N N N 18.692 16.956 22.025 7.841 1.473 1.281 C1 YT0 1
YT0 C2 C2 C 0 1 Y N N N N N 18.154 18.072 21.186 6.618 0.713 0.837 C2 YT0 2
YT0 C3 C3 C 0 1 Y N N N N N 17.000 18.853 21.433 5.351 1.218 1.020 C3 YT0 3
YT0 C4 C4 C 0 1 Y N N N N N 16.892 19.917 20.608 4.351 0.417 0.567 C4 YT0 4
YT0 C5 C5 C 0 1 Y N N N N N 15.786 22.040 20.028 2.089 -0.263 0.105 C5 YT0 5
YT0 C6 C6 C 0 1 Y N N N N N 14.677 24.028 19.795 1.735 -2.295 -0.926 C6 YT0 6
YT0 C7 C7 C 0 1 Y N N N N N 15.490 24.406 18.752 0.373 -2.070 -0.888 C7 YT0 7
YT0 N1 N1 N 0 1 N N N N N N 15.890 20.837 20.692 2.981 0.666 0.616 N1 YT0 8
YT0 C8 C8 C 0 1 N N N N N N 15.275 25.755 18.112 -0.591 -3.084 -1.446 C8 YT0 9
YT0 C9 C9 C 0 1 Y N N N N N 16.502 23.485 18.378 -0.091 -0.885 -0.311 C9 YT0 10
YT0 C10 C10 C 0 1 N N N N N N 18.464 22.804 16.823 -1.703 0.683 0.397 C10 YT0 11
YT0 C11 C11 C 0 1 N N N N N N 18.309 23.522 15.447 -2.777 0.941 -0.669 C11 YT0 12
YT0 C12 C12 C 0 1 N N N N N N 17.767 22.568 14.398 -2.805 2.377 -1.194 C12 YT0 13
YT0 C13 C13 C 0 1 N N N N N N 16.321 22.588 14.195 -1.429 2.839 -1.436 C13 YT0 14
YT0 C14 C14 C 0 1 N N N N N N 19.631 24.996 13.994 -4.859 1.393 0.482 C14 YT0 15
YT0 C15 C15 C 0 1 N N N N N N 20.991 25.645 13.843 -6.263 0.848 0.755 C15 YT0 16
YT0 N2 N2 N 0 1 Y N N N N N 14.807 22.865 20.439 2.557 -1.383 -0.427 N2 YT0 17
YT0 C16 C16 C 0 1 N N N N N N 23.327 25.270 13.439 -7.487 -0.961 1.801 C16 YT0 18
YT0 C17 C17 C 0 1 N N N N N N 22.026 23.607 14.561 -5.405 -1.413 0.650 C17 YT0 19
YT0 C18 C18 C 0 1 N N N N N N 20.667 22.981 14.778 -4.001 -0.868 0.377 C18 YT0 20
YT0 C19 C19 C 0 1 N N N N N N 17.267 24.561 16.100 -1.926 -0.020 -1.511 C19 YT0 21
YT0 N3 N3 N 0 1 N N N N N N 17.374 23.682 17.273 -1.449 -0.618 -0.251 N3 YT0 22
YT0 N4 N4 N 0 1 N N N N N N 15.194 22.579 13.963 -0.366 3.195 -1.623 N4 YT0 23
YT0 N5 N5 N 0 1 N N N N N N 19.668 24.019 15.091 -4.106 0.420 -0.322 N5 YT0 24
YT0 N6 N6 N 0 1 N N N N N N 22.006 24.641 13.529 -6.158 -0.440 1.454 N6 YT0 25
YT0 N7 N7 N 0 1 Y N N N N N 16.642 22.316 19.023 0.790 -0.012 0.166 N7 YT0 26
YT0 S1 S1 S 0 1 Y N N N N N 18.115 19.828 19.398 5.135 -0.971 -0.082 S1 YT0 27
YT0 N8 N8 N 0 1 Y N N N N N 18.749 18.406 20.036 6.712 -0.448 0.258 N8 YT0 28
YT0 H1 H1 H 0 1 N N N N N N 19.580 16.526 21.539 8.087 1.199 2.307 H1 YT0 29
YT0 H2 H2 H 0 1 N N N N N N 18.969 17.343 23.017 8.679 1.226 0.629 H2 YT0 30
YT0 H3 H3 H 0 1 N N N N N N 17.923 16.178 22.137 7.643 2.543 1.229 H3 YT0 31
YT0 H4 H4 H 0 1 N N N N N N 16.279 18.622 22.203 5.166 2.175 1.487 H4 YT0 32
YT0 H5 H5 H 0 1 N N N N N N 13.896 24.704 20.109 2.127 -3.204 -1.357 H5 YT0 33
YT0 H6 H6 H 0 1 N N N N N N 15.138 20.611 21.311 2.652 1.490 1.008 H6 YT0 34
YT0 H7 H7 H 0 1 N N N N N N 14.566 25.656 17.277 -0.874 -3.787 -0.661 H7 YT0 35
YT0 H8 H8 H 0 1 N N N N N N 14.868 26.454 18.858 -1.481 -2.575 -1.815 H8 YT0 36
YT0 H9 H9 H 0 1 N N N N N N 16.234 26.139 17.735 -0.116 -3.625 -2.264 H9 YT0 37
YT0 H10 H10 H 0 1 N N N N N N 18.226 21.730 16.818 -0.859 1.369 0.338 H10 YT0 38
YT0 H11 H11 H 0 1 N N N N N N 19.429 22.963 17.326 -2.104 0.594 1.407 H11 YT0 39
YT0 H12 H12 H 0 1 N N N N N N 18.050 21.547 14.694 -3.370 2.412 -2.126 H12 YT0 40
YT0 H13 H13 H 0 1 N N N N N N 18.244 22.817 13.439 -3.281 3.024 -0.457 H13 YT0 41
YT0 H14 H14 H 0 1 N N N N N N 18.880 25.768 14.217 -4.934 2.335 -0.062 H14 YT0 42
YT0 H15 H15 H 0 1 N N N N N N 19.364 24.484 13.058 -4.343 1.560 1.428 H15 YT0 43
YT0 H16 H16 H 0 1 N N N N N N 21.258 26.148 14.784 -6.813 1.555 1.376 H16 YT0 44
YT0 H17 H17 H 0 1 N N N N N N 20.951 26.385 13.030 -6.788 0.708 -0.190 H17 YT0 45
YT0 H18 H18 H 0 1 N N N N N N 24.082 24.506 13.203 -8.071 -1.103 0.891 H18 YT0 46
YT0 H19 H19 H 0 1 N N N N N N 23.317 26.033 12.646 -7.381 -1.915 2.317 H19 YT0 47
YT0 H20 H20 H 0 1 N N N N N N 23.574 25.744 14.401 -7.997 -0.250 2.452 H20 YT0 48
YT0 H21 H21 H 0 1 N N N N N N 22.733 22.820 14.259 -5.921 -1.579 -0.296 H21 YT0 49
YT0 H22 H22 H 0 1 N N N N N N 22.362 24.058 15.506 -5.331 -2.355 1.194 H22 YT0 50
YT0 H23 H23 H 0 1 N N N N N N 20.363 22.449 13.865 -3.476 -0.727 1.322 H23 YT0 51
YT0 H24 H24 H 0 1 N N N N N N 20.725 22.269 15.615 -3.451 -1.575 -0.244 H24 YT0 52
YT0 H25 H25 H 0 1 N N N N N N 17.645 25.585 16.240 -2.518 -0.704 -2.120 H25 YT0 53
YT0 H26 H26 H 0 1 N N N N N N 16.275 24.598 15.625 -1.141 0.479 -2.080 H26 YT0 54
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YT0 C16 N6 SING N N 1
YT0 N6 C15 SING N N 2
YT0 N6 C17 SING N N 3
YT0 C15 C14 SING N N 4
YT0 N4 C13 TRIP N N 5
YT0 C14 N5 SING N N 6
YT0 C13 C12 SING N N 7
YT0 C12 C11 SING N N 8
YT0 C17 C18 SING N N 9
YT0 C18 N5 SING N N 10
YT0 N5 C11 SING N N 11
YT0 C11 C19 SING N N 12
YT0 C11 C10 SING N N 13
YT0 C19 N3 SING N N 14
YT0 C10 N3 SING N N 15
YT0 N3 C9 SING N N 16
YT0 C8 C7 SING N N 17
YT0 C9 C7 DOUB Y N 18
YT0 C9 N7 SING Y N 19
YT0 C7 C6 SING Y N 20
YT0 N7 C5 DOUB Y N 21
YT0 S1 N8 SING Y N 22
YT0 S1 C4 SING Y N 23
YT0 C6 N2 DOUB Y N 24
YT0 C5 N2 SING Y N 25
YT0 C5 N1 SING N N 26
YT0 N8 C2 DOUB Y N 27
YT0 C4 N1 SING N N 28
YT0 C4 C3 DOUB Y N 29
YT0 C2 C3 SING Y N 30
YT0 C2 C1 SING N N 31
YT0 C1 H1 SING N N 32
YT0 C1 H2 SING N N 33
YT0 C1 H3 SING N N 34
YT0 C3 H4 SING N N 35
YT0 C6 H5 SING N N 36
YT0 N1 H6 SING N N 37
YT0 C8 H7 SING N N 38
YT0 C8 H8 SING N N 39
YT0 C8 H9 SING N N 40
YT0 C10 H10 SING N N 41
YT0 C10 H11 SING N N 42
YT0 C12 H12 SING N N 43
YT0 C12 H13 SING N N 44
YT0 C14 H14 SING N N 45
YT0 C14 H15 SING N N 46
YT0 C15 H16 SING N N 47
YT0 C15 H17 SING N N 48
YT0 C16 H18 SING N N 49
YT0 C16 H19 SING N N 50
YT0 C16 H20 SING N N 51
YT0 C17 H21 SING N N 52
YT0 C17 H22 SING N N 53
YT0 C18 H23 SING N N 54
YT0 C18 H24 SING N N 55
YT0 C19 H25 SING N N 56
YT0 C19 H26 SING N N 57
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YT0 SMILES ACDLabs 12.01 "Cc1cc(Nc2ncc(C)c(n2)N2CC(CC#N)(C2)N2CCN(C)CC2)sn1"
YT0 InChI InChI 1.06 InChI=1S/C19H26N8S/c1-14-11-21-18(22-16-10-15(2)24-28-16)23-17(14)26-12-19(13-26,4-5-20)27-8-6-25(3)7-9-27/h10-11H,4,6-9,12-13H2,1-3H3,(H,21,22,23)
YT0 InChIKey InChI 1.06 VGBYAYCYPVFDTM-UHFFFAOYSA-N
YT0 SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)C2(CC#N)CN(C2)c3nc(Nc4snc(C)c4)ncc3C"
YT0 SMILES CACTVS 3.385 "CN1CCN(CC1)C2(CC#N)CN(C2)c3nc(Nc4snc(C)c4)ncc3C"
YT0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(sn1)Nc2ncc(c(n2)N3CC(C3)(CC#N)N4CCN(CC4)C)C"
YT0 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(sn1)Nc2ncc(c(n2)N3CC(C3)(CC#N)N4CCN(CC4)C)C"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YT0 "SYSTEMATIC NAME" ACDLabs 12.01 "[1-{5-methyl-2-[(3-methyl-1,2-thiazol-5-yl)amino]pyrimidin-4-yl}-3-(4-methylpiperazin-1-yl)azetidin-3-yl]acetonitrile"
YT0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 2-[1-[5-methyl-2-[(3-methyl-1,2-thiazol-5-yl)amino]pyrimidin-4-yl]-3-(4-methylpiperazin-1-yl)azetidin-3-yl]ethanenitrile
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YT0 'Create component' 2023-02-20 RCSB
YT0 'Initial release' 2023-06-21 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
YT0 C1 C 17.423 3.026 1
YT0 C2 C 15.932 3.183 2
YT0 C3 C 14.928 2.068 3
YT0 C4 C 13.558 2.678 4
YT0 C5 C 10.960 2.678 5
YT0 C6 C 9.661 4.928 6
YT0 C7 C 8.361 4.178 7
YT0 N1 N 12.259 1.928 8
YT0 C8 C 7.062 4.928 9
YT0 C9 C 8.361 2.678 10
YT0 C10 C 6.674 0.479 11
YT0 C11 C 5.225 0.868 12
YT0 C12 C 3.776 1.256 13
YT0 C13 C 3.388 2.704 14
YT0 C14 C 5.898 -1.642 15
YT0 C15 C 5.510 -3.091 16
YT0 N2 N 10.960 4.178 17
YT0 C16 C 3.672 -4.928 18
YT0 C17 C 3.000 -2.419 19
YT0 C18 C 3.388 -0.970 20
YT0 C19 C 5.614 2.316 21
YT0 N3 N 7.062 1.928 22
YT0 N4 N 3.000 4.154 23
YT0 N5 N 4.837 -0.581 24
YT0 N6 N 4.061 -3.479 25
YT0 N7 N 9.661 1.928 26
YT0 S1 S 13.714 4.170 27
YT0 N8 N 15.182 4.482 28
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
YT0 C16 N6 SINGLE NONE 1
YT0 N6 C15 SINGLE NONE 2
YT0 N6 C17 SINGLE NONE 3
YT0 C15 C14 SINGLE NONE 4
YT0 N4 C13 TRIPLE NONE 5
YT0 C14 N5 SINGLE NONE 6
YT0 C13 C12 SINGLE NONE 7
YT0 C12 C11 SINGLE NONE 8
YT0 C17 C18 SINGLE NONE 9
YT0 C18 N5 SINGLE NONE 10
YT0 N5 C11 SINGLE NONE 11
YT0 C11 C19 SINGLE NONE 12
YT0 C11 C10 SINGLE NONE 13
YT0 C19 N3 SINGLE NONE 14
YT0 C10 N3 SINGLE NONE 15
YT0 N3 C9 SINGLE NONE 16
YT0 C8 C7 SINGLE NONE 17
YT0 C9 C7 SINGLE NONE 18
YT0 C9 N7 DOUBLE NONE 19
YT0 C7 C6 DOUBLE NONE 20
YT0 N7 C5 SINGLE NONE 21
YT0 S1 N8 SINGLE NONE 22
YT0 S1 C4 SINGLE NONE 23
YT0 C6 N2 SINGLE NONE 24
YT0 C5 N2 DOUBLE NONE 25
YT0 C5 N1 SINGLE NONE 26
YT0 N8 C2 DOUBLE NONE 27
YT0 C4 N1 SINGLE NONE 28
YT0 C4 C3 DOUBLE NONE 29
YT0 C2 C3 SINGLE NONE 30
YT0 C2 C1 SINGLE NONE 31
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
YT0 MurckoScaffold S1 scaffold c1cc(Nc2nccc(N3CC(N4CCNCC4)C3)n2)sn1 InChI=1S/C14H19N7S/c1-3-16-14(19-13-2-4-17-22-13)18-12(1)21-9-11(10-21)20-7-5-15-6-8-20/h1-4,11,15H,5-10H2,(H,16,18,19) PIVBYROPHLUZQM-UHFFFAOYSA-N
YT0 piperazine F1 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
YT0 pyrimidine F2 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
YT0 Z54628578 F3 fragment CNc1ncccn1 InChI=1S/C5H7N3/c1-6-5-7-3-2-4-8-5/h2-4H,1H3,(H,6,7,8) BQNXHDSGGRTFNX-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
YT0 C2 S1 1
YT0 C3 S1 1
YT0 C4 S1 1
YT0 C5 S1 1
YT0 C6 S1 1
YT0 C7 S1 1
YT0 N1 S1 1
YT0 C9 S1 1
YT0 C10 S1 1
YT0 C11 S1 1
YT0 C14 S1 1
YT0 C15 S1 1
YT0 N2 S1 1
YT0 C17 S1 1
YT0 C18 S1 1
YT0 C19 S1 1
YT0 N3 S1 1
YT0 N5 S1 1
YT0 N6 S1 1
YT0 N7 S1 1
YT0 S1 S1 1
YT0 N8 S1 1
YT0 N5 F1 1
YT0 C14 F1 1
YT0 C15 F1 1
YT0 N6 F1 1
YT0 C17 F1 1
YT0 C18 F1 1
YT0 C7 F2 1
YT0 C9 F2 1
YT0 N7 F2 1
YT0 C5 F2 1
YT0 N2 F2 1
YT0 C6 F2 1
YT0 C4 F3 1
YT0 N1 F3 1
YT0 C5 F3 1
YT0 N7 F3 1
YT0 C9 F3 1
YT0 C7 F3 1
YT0 C6 F3 1
YT0 N2 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id YT0
_pdbe_chem_comp_rdkit_properties.exactmw 398.200
_pdbe_chem_comp_rdkit_properties.amw 398.540
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 28
_pdbe_chem_comp_rdkit_properties.NumAtoms 54
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.579
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 206.106
_pdbe_chem_comp_rdkit_properties.tpsa 84.210
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.762
_pdbe_chem_comp_rdkit_properties.CrippenMR 108.143
_pdbe_chem_comp_rdkit_properties.chi0v 14.302
_pdbe_chem_comp_rdkit_properties.chi1v 7.961
_pdbe_chem_comp_rdkit_properties.chi2v 3.866
_pdbe_chem_comp_rdkit_properties.chi3v 3.866
_pdbe_chem_comp_rdkit_properties.chi4v 2.552
_pdbe_chem_comp_rdkit_properties.chi0n 39.486
_pdbe_chem_comp_rdkit_properties.chi1n 20.135
_pdbe_chem_comp_rdkit_properties.chi2n 3.226
_pdbe_chem_comp_rdkit_properties.chi3n 3.226
_pdbe_chem_comp_rdkit_properties.chi4n 2.064
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.280
_pdbe_chem_comp_rdkit_properties.kappa1 5.249
_pdbe_chem_comp_rdkit_properties.kappa2 7.621
_pdbe_chem_comp_rdkit_properties.kappa3 3.675
_pdbe_chem_comp_rdkit_properties.Phi 1.429
#
_pdbe_chem_comp_external_mappings.comp_id YT0
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PDBe
_pdbe_chem_comp_external_mappings.resource_id YT0
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
YT0 C1 7.390 -2.259 0.437 ETKDGv3 1
YT0 C2 5.908 -2.112 0.545 ETKDGv3 2
YT0 C3 5.054 -3.157 1.189 ETKDGv3 3
YT0 C4 3.762 -2.837 1.241 ETKDGv3 4
YT0 C5 1.346 -3.312 1.882 ETKDGv3 5
YT0 C6 -0.903 -3.847 2.469 ETKDGv3 6
YT0 C7 -1.357 -2.645 2.076 ETKDGv3 7
YT0 N1 2.732 -3.671 1.794 ETKDGv3 8
YT0 C8 -2.819 -2.316 2.183 ETKDGv3 9
YT0 C9 -0.366 -1.675 1.530 ETKDGv3 10
YT0 C10 -0.013 0.787 0.513 ETKDGv3 11
YT0 C11 -1.227 1.657 0.304 ETKDGv3 12
YT0 C12 -1.254 2.920 1.208 ETKDGv3 13
YT0 C13 -2.572 3.568 1.170 ETKDGv3 14
YT0 C14 -0.891 3.058 -1.719 ETKDGv3 15
YT0 C15 -1.071 3.150 -3.253 ETKDGv3 16
YT0 N2 0.492 -4.167 2.362 ETKDGv3 17
YT0 C16 -3.511 3.223 -3.301 ETKDGv3 18
YT0 C17 -2.362 1.056 -3.316 ETKDGv3 19
YT0 C18 -1.534 0.749 -2.056 ETKDGv3 20
YT0 C19 -1.937 0.490 0.951 ETKDGv3 21
YT0 N3 -0.740 -0.369 1.079 ETKDGv3 22
YT0 N4 -3.610 4.079 1.138 ETKDGv3 23
YT0 N5 -1.611 1.903 -1.129 ETKDGv3 24
YT0 N6 -2.306 2.484 -3.715 ETKDGv3 25
YT0 N7 0.886 -2.021 1.455 ETKDGv3 26
YT0 S1 3.602 -1.243 0.501 ETKDGv3 27
YT0 N8 5.307 -1.030 0.138 ETKDGv3 28
YT0 H1 7.864 -1.924 1.383 ETKDGv3 29
YT0 H2 7.779 -1.646 -0.403 ETKDGv3 30
YT0 H3 7.654 -3.322 0.254 ETKDGv3 31
YT0 H4 5.446 -4.089 1.575 ETKDGv3 32
YT0 H5 -1.578 -4.592 2.871 ETKDGv3 33
YT0 H6 3.013 -4.611 2.158 ETKDGv3 34
YT0 H7 -3.235 -2.132 1.172 ETKDGv3 35
YT0 H8 -3.397 -3.147 2.641 ETKDGv3 36
YT0 H9 -2.957 -1.420 2.821 ETKDGv3 37
YT0 H10 0.700 1.195 1.264 ETKDGv3 38
YT0 H11 0.535 0.502 -0.407 ETKDGv3 39
YT0 H12 -0.478 3.646 0.890 ETKDGv3 40
YT0 H13 -1.027 2.658 2.265 ETKDGv3 41
YT0 H14 0.196 3.005 -1.484 ETKDGv3 42
YT0 H15 -1.295 3.998 -1.287 ETKDGv3 43
YT0 H16 -0.200 2.667 -3.750 ETKDGv3 44
YT0 H17 -1.057 4.214 -3.577 ETKDGv3 45
YT0 H18 -3.666 3.172 -2.202 ETKDGv3 46
YT0 H19 -3.437 4.289 -3.608 ETKDGv3 47
YT0 H20 -4.404 2.799 -3.808 ETKDGv3 48
YT0 H21 -3.412 0.724 -3.149 ETKDGv3 49
YT0 H22 -1.972 0.440 -4.155 ETKDGv3 50
YT0 H23 -1.912 -0.193 -1.616 ETKDGv3 51
YT0 H24 -0.481 0.561 -2.365 ETKDGv3 52
YT0 H25 -2.347 0.722 1.959 ETKDGv3 53
YT0 H26 -2.730 0.024 0.333 ETKDGv3 54
#