data_YTG
#
_chem_comp.id YTG
_chem_comp.name N-(4-chlorophenyl)-Nalpha-[(5-hydroxy-1H-indol-3-yl)acetyl]-N-methyl-L-phenylalaninamide
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H24 Cl N3 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-03-31
_chem_comp.pdbx_modified_date 2022-04-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 461.940
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code YTG
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7M9F
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YTG C1 C1 C 0 1 Y N N N N N -11.423 -29.313 -6.073 -6.729 -1.566 -0.498 C1 YTG 1
YTG C2 C2 C 0 1 Y N N N N N -12.479 -30.220 -6.009 -6.346 -2.767 -1.050 C2 YTG 2
YTG C3 C3 C 0 1 Y N N N N N -13.193 -30.295 -4.807 -5.062 -3.266 -0.842 C3 YTG 3
YTG O3 O1 O 0 1 N N N N N N -14.248 -31.150 -4.701 -4.699 -4.454 -1.395 O3 YTG 4
YTG C4 C4 C 0 1 Y N N N N N -12.819 -29.489 -3.714 -4.156 -2.558 -0.078 C4 YTG 5
YTG C5 C5 C 0 1 Y N N N N N -11.794 -28.620 -3.851 -4.535 -1.338 0.488 C5 YTG 6
YTG C6 C6 C 0 1 Y N N N N N -11.102 -28.547 -5.010 -5.832 -0.838 0.276 C6 YTG 7
YTG N1 N1 N 0 1 Y N N N N N -10.135 -27.639 -4.846 -5.917 0.365 0.945 N1 YTG 8
YTG C8 C7 C 0 1 Y N N N N N -10.228 -27.122 -3.625 -4.729 0.637 1.566 C8 YTG 9
YTG C7 C8 C 0 1 Y N N N N N -11.238 -27.728 -3.016 -3.852 -0.351 1.327 C7 YTG 10
YTG C9 C9 C 0 1 N N N N N N -11.682 -27.435 -1.560 -2.434 -0.431 1.832 C9 YTG 11
YTG C10 C10 C 0 1 N N N N N N -10.799 -28.143 -0.509 -1.496 0.108 0.783 C10 YTG 12
YTG O1 O2 O 0 1 N N N N N N -10.987 -29.331 -0.255 -1.936 0.518 -0.271 O1 YTG 13
YTG N2 N2 N 0 1 N N N N N N -9.894 -27.355 0.113 -0.169 0.136 1.015 N2 YTG 14
YTG C11 C11 C 0 1 N N S N N N -9.012 -27.840 1.185 0.742 0.661 -0.005 C11 YTG 15
YTG C20 C12 C 0 1 N N N N N N -7.722 -27.032 1.289 0.836 2.182 0.128 C20 YTG 16
YTG C21 C13 C 0 1 Y N N N N N -6.852 -27.379 0.260 -0.505 2.797 -0.181 C21 YTG 17
YTG C22 C14 C 0 1 Y N N N N N -5.851 -28.320 0.482 -1.424 2.996 0.832 C22 YTG 18
YTG C23 C15 C 0 1 Y N N N N N -4.972 -28.670 -0.553 -2.654 3.559 0.548 C23 YTG 19
YTG C24 C16 C 0 1 Y N N N N N -5.087 -28.085 -1.807 -2.965 3.923 -0.748 C24 YTG 20
YTG C25 C17 C 0 1 Y N N N N N -6.114 -27.163 -2.014 -2.046 3.724 -1.762 C25 YTG 21
YTG C26 C18 C 0 1 Y N N N N N -7.001 -26.809 -1.008 -0.813 3.166 -1.477 C26 YTG 22
YTG C12 C19 C 0 1 N N N N N N -9.730 -27.586 2.497 2.109 0.055 0.183 C12 YTG 23
YTG O2 O3 O 0 1 N N N N N N -10.309 -26.498 2.615 2.303 -0.737 1.081 O2 YTG 24
YTG N3 N3 N 0 1 N N N N N N -9.638 -28.545 3.472 3.117 0.394 -0.646 N3 YTG 25
YTG C14 C20 C 0 1 N N N N N N -10.286 -28.405 4.808 2.856 1.256 -1.801 C14 YTG 26
YTG C13 C21 C 0 1 Y N N N N N -8.961 -29.650 3.263 4.412 -0.079 -0.403 C13 YTG 27
YTG C15 C22 C 0 1 Y N N N N N -9.506 -30.659 2.484 4.684 -1.438 -0.488 C15 YTG 28
YTG C16 C23 C 0 1 Y N N N N N -8.805 -31.822 2.242 5.963 -1.901 -0.248 C16 YTG 29
YTG C17 C24 C 0 1 Y N N N N N -7.559 -31.958 2.842 6.972 -1.012 0.078 C17 YTG 30
YTG CL CL1 CL 0 0 N N N N N N -6.627 -33.383 2.636 8.578 -1.598 0.379 CL YTG 31
YTG C18 C25 C 0 1 Y N N N N N -7.011 -30.947 3.622 6.703 0.343 0.163 C18 YTG 32
YTG C19 C26 C 0 1 Y N N N N N -7.715 -29.780 3.833 5.428 0.812 -0.082 C19 YTG 33
YTG H1 H1 H 0 1 N N N N N N -10.854 -29.222 -6.986 -7.726 -1.187 -0.669 H1 YTG 34
YTG H2 H2 H 0 1 N N N N N N -12.737 -30.841 -6.854 -7.047 -3.329 -1.650 H2 YTG 35
YTG H3 H3 H 0 1 N N N N N N -14.624 -31.084 -3.831 -4.313 -4.375 -2.278 H3 YTG 36
YTG H4 H4 H 0 1 N N N N N N -13.347 -29.565 -2.775 -3.161 -2.945 0.083 H4 YTG 37
YTG H5 H5 H 0 1 N N N N N N -9.451 -27.389 -5.532 -6.703 0.933 0.971 H5 YTG 38
YTG H6 H6 H 0 1 N N N N N N -9.598 -26.351 -3.207 -4.526 1.517 2.158 H6 YTG 39
YTG H7 H7 H 0 1 N N N N N N -11.630 -26.350 -1.389 -2.338 0.159 2.743 H7 YTG 40
YTG H8 H8 H 0 1 N N N N N N -12.720 -27.777 -1.434 -2.182 -1.470 2.044 H8 YTG 41
YTG H9 H9 H 0 1 N N N N N N -9.821 -26.398 -0.169 0.183 -0.191 1.857 H9 YTG 42
YTG H10 H10 H 0 1 N N N N N N -8.788 -28.910 1.066 0.365 0.405 -0.995 H10 YTG 43
YTG H11 H11 H 0 1 N N N N N N -7.241 -27.239 2.256 1.128 2.440 1.146 H11 YTG 44
YTG H12 H12 H 0 1 N N N N N N -7.958 -25.960 1.219 1.580 2.563 -0.571 H12 YTG 45
YTG H13 H13 H 0 1 N N N N N N -5.751 -28.782 1.453 -1.181 2.711 1.845 H13 YTG 46
YTG H14 H14 H 0 1 N N N N N N -4.198 -29.402 -0.373 -3.373 3.715 1.340 H14 YTG 47
YTG H15 H15 H 0 1 N N N N N N -4.400 -28.337 -2.601 -3.926 4.363 -0.970 H15 YTG 48
YTG H16 H16 H 0 1 N N N N N N -6.222 -26.711 -2.989 -2.289 4.008 -2.775 H16 YTG 49
YTG H17 H17 H 0 1 N N N N N N -7.795 -26.103 -1.201 -0.095 3.011 -2.268 H17 YTG 50
YTG H18 H18 H 0 1 N N N N N N -10.072 -29.297 5.415 2.986 2.299 -1.513 H18 YTG 51
YTG H19 H19 H 0 1 N N N N N N -9.891 -27.513 5.315 3.553 1.010 -2.602 H19 YTG 52
YTG H20 H20 H 0 1 N N N N N N -11.374 -28.302 4.679 1.834 1.099 -2.148 H20 YTG 53
YTG H21 H21 H 0 1 N N N N N N -10.492 -30.533 2.061 3.896 -2.132 -0.742 H21 YTG 54
YTG H22 H22 H 0 1 N N N N N N -9.210 -32.598 1.610 6.175 -2.958 -0.315 H22 YTG 55
YTG H23 H23 H 0 1 N N N N N N -6.034 -31.075 4.063 7.493 1.034 0.418 H23 YTG 56
YTG H24 H24 H 0 1 N N N N N N -7.297 -28.985 4.433 5.220 1.870 -0.020 H24 YTG 57
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YTG C1 C2 DOUB Y N 1
YTG C1 C6 SING Y N 2
YTG C2 C3 SING Y N 3
YTG C6 N1 SING Y N 4
YTG C6 C5 DOUB Y N 5
YTG N1 C8 SING Y N 6
YTG C3 O3 SING N N 7
YTG C3 C4 DOUB Y N 8
YTG C5 C4 SING Y N 9
YTG C5 C7 SING Y N 10
YTG C8 C7 DOUB Y N 11
YTG C7 C9 SING N N 12
YTG C25 C24 DOUB Y N 13
YTG C25 C26 SING Y N 14
YTG C24 C23 SING Y N 15
YTG C9 C10 SING N N 16
YTG C26 C21 DOUB Y N 17
YTG C23 C22 DOUB Y N 18
YTG C10 O1 DOUB N N 19
YTG C10 N2 SING N N 20
YTG N2 C11 SING N N 21
YTG C21 C22 SING Y N 22
YTG C21 C20 SING N N 23
YTG C11 C20 SING N N 24
YTG C11 C12 SING N N 25
YTG C16 C15 DOUB Y N 26
YTG C16 C17 SING Y N 27
YTG C15 C13 SING Y N 28
YTG C12 O2 DOUB N N 29
YTG C12 N3 SING N N 30
YTG CL C17 SING N N 31
YTG C17 C18 DOUB Y N 32
YTG C13 N3 SING N N 33
YTG C13 C19 DOUB Y N 34
YTG N3 C14 SING N N 35
YTG C18 C19 SING Y N 36
YTG C1 H1 SING N N 37
YTG C2 H2 SING N N 38
YTG O3 H3 SING N N 39
YTG C4 H4 SING N N 40
YTG N1 H5 SING N N 41
YTG C8 H6 SING N N 42
YTG C9 H7 SING N N 43
YTG C9 H8 SING N N 44
YTG N2 H9 SING N N 45
YTG C11 H10 SING N N 46
YTG C20 H11 SING N N 47
YTG C20 H12 SING N N 48
YTG C22 H13 SING N N 49
YTG C23 H14 SING N N 50
YTG C24 H15 SING N N 51
YTG C25 H16 SING N N 52
YTG C26 H17 SING N N 53
YTG C14 H18 SING N N 54
YTG C14 H19 SING N N 55
YTG C14 H20 SING N N 56
YTG C15 H21 SING N N 57
YTG C16 H22 SING N N 58
YTG C18 H23 SING N N 59
YTG C19 H24 SING N N 60
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YTG SMILES ACDLabs 12.01 Clc1ccc(cc1)N(C)C(=O)C(Cc1ccccc1)NC(=O)Cc1c[NH]c2ccc(O)cc21
YTG InChI InChI 1.03 InChI=1S/C26H24ClN3O3/c1-30(20-9-7-19(27)8-10-20)26(33)24(13-17-5-3-2-4-6-17)29-25(32)14-18-16-28-23-12-11-21(31)15-22(18)23/h2-12,15-16,24,28,31H,13-14H2,1H3,(H,29,32)/t24-/m0/s1
YTG InChIKey InChI 1.03 NPICZGLGMXHEPY-DEOSSOPVSA-N
YTG SMILES_CANONICAL CACTVS 3.385 CN(C(=O)[C@H](Cc1ccccc1)NC(=O)Cc2c[nH]c3ccc(O)cc23)c4ccc(Cl)cc4
YTG SMILES CACTVS 3.385 CN(C(=O)[CH](Cc1ccccc1)NC(=O)Cc2c[nH]c3ccc(O)cc23)c4ccc(Cl)cc4
YTG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CN(c1ccc(cc1)Cl)C(=O)[C@H](Cc2ccccc2)NC(=O)Cc3c[nH]c4c3cc(cc4)O
YTG SMILES "OpenEye OEToolkits" 2.0.7 CN(c1ccc(cc1)Cl)C(=O)C(Cc2ccccc2)NC(=O)Cc3c[nH]c4c3cc(cc4)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YTG "SYSTEMATIC NAME" ACDLabs 12.01 N-(4-chlorophenyl)-Nalpha-[(5-hydroxy-1H-indol-3-yl)acetyl]-N-methyl-L-phenylalaninamide
YTG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 (2~{S})-~{N}-(4-chlorophenyl)-~{N}-methyl-2-[2-(5-oxidanyl-1~{H}-indol-3-yl)ethanoylamino]-3-phenyl-propanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YTG 'Create component' 2021-03-31 RCSB
YTG 'Initial release' 2022-04-06 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
YTG C1 C 6.404 -6.916 1
YTG C2 C 5.104 -6.166 2
YTG C3 C 5.104 -4.666 3
YTG O3 O 3.805 -3.916 4
YTG C4 C 6.404 -3.916 5
YTG C5 C 7.702 -4.666 6
YTG C6 C 7.702 -6.166 7
YTG N1 N 9.122 -6.623 8
YTG C8 C 9.997 -5.416 9
YTG C7 C 9.122 -4.209 10
YTG C9 C 9.588 -2.783 11
YTG C10 C 11.056 -2.474 12
YTG O1 O 12.057 -3.590 13
YTG N2 N 11.522 -1.048 14
YTG C11 C 12.989 -0.739 15
YTG C20 C 13.991 -1.855 16
YTG C21 C 15.459 -1.546 17
YTG C22 C 16.461 -2.662 18
YTG C23 C 17.928 -2.353 19
YTG C24 C 18.394 -0.927 20
YTG C25 C 17.393 0.190 21
YTG C26 C 15.925 -0.120 22
YTG C12 C 13.455 0.687 23
YTG O2 O 14.923 0.997 24
YTG N3 N 12.454 1.804 25
YTG C14 C 10.986 1.494 26
YTG C13 C 12.919 3.229 27
YTG C15 C 11.918 4.346 28
YTG C16 C 12.384 5.772 29
YTG C17 C 13.852 6.081 30
YTG CL Cl 14.318 7.507 31
YTG C18 C 14.853 4.965 32
YTG C19 C 14.387 3.539 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
YTG C1 C2 DOUBLE NONE 1
YTG C1 C6 SINGLE NONE 2
YTG C2 C3 SINGLE NONE 3
YTG C6 N1 SINGLE NONE 4
YTG C6 C5 DOUBLE NONE 5
YTG N1 C8 SINGLE NONE 6
YTG C3 O3 SINGLE NONE 7
YTG C3 C4 DOUBLE NONE 8
YTG C5 C4 SINGLE NONE 9
YTG C5 C7 SINGLE NONE 10
YTG C8 C7 DOUBLE NONE 11
YTG C7 C9 SINGLE NONE 12
YTG C25 C24 DOUBLE NONE 13
YTG C25 C26 SINGLE NONE 14
YTG C24 C23 SINGLE NONE 15
YTG C9 C10 SINGLE NONE 16
YTG C26 C21 DOUBLE NONE 17
YTG C23 C22 DOUBLE NONE 18
YTG C10 O1 DOUBLE NONE 19
YTG C10 N2 SINGLE NONE 20
YTG N2 C11 SINGLE NONE 21
YTG C21 C22 SINGLE NONE 22
YTG C21 C20 SINGLE NONE 23
YTG C11 C20 SINGLE BEGINDASH 24
YTG C11 C12 SINGLE NONE 25
YTG C16 C15 DOUBLE NONE 26
YTG C16 C17 SINGLE NONE 27
YTG C15 C13 SINGLE NONE 28
YTG C12 O2 DOUBLE NONE 29
YTG C12 N3 SINGLE NONE 30
YTG CL C17 SINGLE NONE 31
YTG C17 C18 DOUBLE NONE 32
YTG C13 N3 SINGLE NONE 33
YTG C13 C19 DOUBLE NONE 34
YTG N3 C14 SINGLE NONE 35
YTG C18 C19 SINGLE NONE 36
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
YTG MurckoScaffold S1 scaffold 'O=C(Cc1c[nH]c2ccccc12)N[C@@H](Cc1ccccc1)C(=O)Nc1ccccc1' InChI=1S/C25H23N3O2/c29-24(16-19-17-26-22-14-8-7-13-21(19)22)28-23(15-18-9-3-1-4-10-18)25(30)27-20-11-5-2-6-12-20/h1-14,17,23,26H,15-16H2,(H,27,30)(H,28,29)/t23-/m0/s1 HJLJFYZMCUDIEM-QHCPKHFHSA-N
YTG amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
YTG indole F2 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
YTG peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
YTG phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
YTG pyrrole F5 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
YTG C1 S1 1
YTG C2 S1 1
YTG C3 S1 1
YTG C4 S1 1
YTG C5 S1 1
YTG C6 S1 1
YTG N1 S1 1
YTG C8 S1 1
YTG C7 S1 1
YTG C9 S1 1
YTG C10 S1 1
YTG O1 S1 1
YTG N2 S1 1
YTG C11 S1 1
YTG C20 S1 1
YTG C21 S1 1
YTG C22 S1 1
YTG C23 S1 1
YTG C24 S1 1
YTG C25 S1 1
YTG C26 S1 1
YTG C12 S1 1
YTG O2 S1 1
YTG N3 S1 1
YTG C13 S1 1
YTG C15 S1 1
YTG C16 S1 1
YTG C17 S1 1
YTG C18 S1 1
YTG C19 S1 1
YTG N2 F1 1
YTG C10 F1 1
YTG O1 F1 1
YTG C9 F1 1
YTG N3 F1 2
YTG C12 F1 2
YTG O2 F1 2
YTG C11 F1 2
YTG C6 F2 1
YTG C5 F2 1
YTG C7 F2 1
YTG C8 F2 1
YTG N1 F2 1
YTG C4 F2 1
YTG C3 F2 1
YTG C2 F2 1
YTG C1 F2 1
YTG O2 F3 1
YTG C12 F3 1
YTG C11 F3 1
YTG N2 F3 1
YTG C1 F4 1
YTG C2 F4 1
YTG C3 F4 1
YTG C4 F4 1
YTG C5 F4 1
YTG C6 F4 1
YTG C21 F4 2
YTG C26 F4 2
YTG C25 F4 2
YTG C24 F4 2
YTG C23 F4 2
YTG C22 F4 2
YTG C13 F4 3
YTG C15 F4 3
YTG C16 F4 3
YTG C17 F4 3
YTG C18 F4 3
YTG C19 F4 3
YTG C6 F5 1
YTG C5 F5 1
YTG C7 F5 1
YTG C8 F5 1
YTG N1 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id YTG
_pdbe_chem_comp_rdkit_properties.exactmw 461.151
_pdbe_chem_comp_rdkit_properties.amw 461.949
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 57
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.154
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 230.278
_pdbe_chem_comp_rdkit_properties.tpsa 85.430
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.079
_pdbe_chem_comp_rdkit_properties.CrippenMR 126.434
_pdbe_chem_comp_rdkit_properties.chi0v 16.700
_pdbe_chem_comp_rdkit_properties.chi1v 8.995
_pdbe_chem_comp_rdkit_properties.chi2v 3.888
_pdbe_chem_comp_rdkit_properties.chi3v 3.888
_pdbe_chem_comp_rdkit_properties.chi4v 2.406
_pdbe_chem_comp_rdkit_properties.chi0n 39.944
_pdbe_chem_comp_rdkit_properties.chi1n 20.419
_pdbe_chem_comp_rdkit_properties.chi2n 3.699
_pdbe_chem_comp_rdkit_properties.chi3n 3.699
_pdbe_chem_comp_rdkit_properties.chi4n 2.312
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.770
_pdbe_chem_comp_rdkit_properties.kappa1 7.367
_pdbe_chem_comp_rdkit_properties.kappa2 9.794
_pdbe_chem_comp_rdkit_properties.kappa3 5.354
_pdbe_chem_comp_rdkit_properties.Phi 2.187
#
_pdbe_chem_comp_external_mappings.comp_id YTG
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PDBe
_pdbe_chem_comp_external_mappings.resource_id YTG
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
YTG C1 3.310 -1.981 -0.148 ETKDGv3 1
YTG C2 2.458 -2.583 -0.996 ETKDGv3 2
YTG C3 1.558 -1.770 -1.872 ETKDGv3 3
YTG O3 0.673 -2.399 -2.743 ETKDGv3 4
YTG C4 1.596 -0.426 -1.818 ETKDGv3 5
YTG C5 2.537 0.210 -0.878 ETKDGv3 6
YTG C6 3.334 -0.510 -0.114 ETKDGv3 7
YTG N1 4.123 0.318 0.727 ETKDGv3 8
YTG C8 3.698 1.642 0.404 ETKDGv3 9
YTG C7 2.769 1.617 -0.553 ETKDGv3 10
YTG C9 1.988 2.798 -1.045 ETKDGv3 11
YTG C10 0.858 3.095 -0.107 ETKDGv3 12
YTG O1 0.865 4.167 0.558 ETKDGv3 13
YTG N2 -0.210 2.150 0.044 ETKDGv3 14
YTG C11 -1.277 2.279 1.041 ETKDGv3 15
YTG C20 -2.613 2.625 0.343 ETKDGv3 16
YTG C21 -3.055 1.581 -0.657 ETKDGv3 17
YTG C22 -2.499 1.593 -2.035 ETKDGv3 18
YTG C23 -2.838 0.638 -2.909 ETKDGv3 19
YTG C24 -3.783 -0.425 -2.514 ETKDGv3 20
YTG C25 -4.307 -0.430 -1.283 ETKDGv3 21
YTG C26 -3.930 0.619 -0.312 ETKDGv3 22
YTG C12 -1.352 1.017 1.871 ETKDGv3 23
YTG O2 -2.417 0.715 2.475 ETKDGv3 24
YTG N3 -0.190 0.187 2.042 ETKDGv3 25
YTG C14 0.946 0.727 2.793 ETKDGv3 26
YTG C13 -0.223 -1.203 1.649 ETKDGv3 27
YTG C15 0.580 -2.222 2.381 ETKDGv3 28
YTG C16 0.574 -3.502 1.988 ETKDGv3 29
YTG C17 -0.235 -3.918 0.825 ETKDGv3 30
YTG CL -0.221 -5.593 0.306 ETKDGv3 31
YTG C18 -0.967 -3.014 0.164 ETKDGv3 32
YTG C19 -0.955 -1.599 0.588 ETKDGv3 33
YTG H1 3.957 -2.561 0.497 ETKDGv3 34
YTG H2 2.416 -3.664 -1.037 ETKDGv3 35
YTG H3 0.617 -3.409 -2.793 ETKDGv3 36
YTG H4 0.948 0.173 -2.446 ETKDGv3 37
YTG H5 4.791 0.024 1.473 ETKDGv3 38
YTG H6 4.048 2.532 0.910 ETKDGv3 39
YTG H7 1.580 2.585 -2.055 ETKDGv3 40
YTG H8 2.660 3.680 -1.130 ETKDGv3 41
YTG H9 -0.211 1.308 -0.571 ETKDGv3 42
YTG H10 -1.044 3.108 1.743 ETKDGv3 43
YTG H11 -3.403 2.785 1.110 ETKDGv3 44
YTG H12 -2.495 3.597 -0.183 ETKDGv3 45
YTG H13 -1.807 2.371 -2.335 ETKDGv3 46
YTG H14 -2.423 0.644 -3.909 ETKDGv3 47
YTG H15 -4.054 -1.196 -3.224 ETKDGv3 48
YTG H16 -5.002 -1.207 -0.992 ETKDGv3 49
YTG H17 -4.360 0.588 0.681 ETKDGv3 50
YTG H18 0.819 0.502 3.872 ETKDGv3 51
YTG H19 1.021 1.827 2.663 ETKDGv3 52
YTG H20 1.894 0.280 2.432 ETKDGv3 53
YTG H21 1.170 -1.941 3.242 ETKDGv3 54
YTG H22 1.163 -4.234 2.525 ETKDGv3 55
YTG H23 -1.557 -3.307 -0.694 ETKDGv3 56
YTG H24 -1.522 -0.886 0.007 ETKDGv3 57
#