data_ZBD
#
_chem_comp.id ZBD
_chem_comp.name
4-{3-[4-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)benzyl]-2,2-dioxido-2,1,3-benzothiadiazol-1(3H)-yl}-N-[(2R)-4-hydroxybutan-2-yl]-N-methylbutanamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H29 F6 N3 O5 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-03-09
_chem_comp.pdbx_modified_date 2015-04-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 597.570
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ZBD
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4YMQ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ZBD N1 N1 N 0 1 N N N N N N -6.751 28.872 15.942 0.603 3.032 -0.308 N1 ZBD 1
ZBD C7 C1 C 0 1 N N N N N N -8.210 28.997 15.852 2.003 3.261 -0.676 C7 ZBD 2
ZBD C8 C2 C 0 1 Y N N N N N -8.848 27.643 15.684 2.757 1.958 -0.618 C8 ZBD 3
ZBD C10 C3 C 0 1 Y N N N N N -9.806 25.661 16.618 3.531 -0.040 -1.686 C10 ZBD 4
ZBD C13 C4 C 0 1 Y N N N N N -9.069 27.147 14.414 3.366 1.564 0.559 C13 ZBD 5
ZBD C15 C5 C 0 1 N N N N N N -10.288 22.817 16.269 6.352 -1.465 -0.064 C15 ZBD 6
ZBD C24 C6 C 0 1 Y N N N N N -5.964 29.006 17.104 0.053 2.997 0.990 C24 ZBD 7
ZBD C26 C7 C 0 1 Y N N N N N -3.737 28.910 18.006 -1.958 2.703 2.272 C26 ZBD 8
ZBD C28 C8 C 0 1 Y N N N N N -5.575 29.374 19.462 0.107 3.119 3.400 C28 ZBD 9
ZBD O31 O1 O 0 1 N N N N N N -5.628 29.644 13.833 -0.486 1.495 -1.941 O31 ZBD 10
ZBD S5 S1 S 0 1 N N N N N N -5.666 28.532 14.720 -0.683 2.764 -1.333 S5 ZBD 11
ZBD O30 O2 O 0 1 N N N N N N -5.899 27.192 14.292 -0.910 3.969 -2.053 O30 ZBD 12
ZBD C25 C9 C 0 1 Y N N N N N -4.604 28.832 16.908 -1.310 2.759 1.033 C25 ZBD 13
ZBD N6 N2 N 0 1 N N N N N N -4.235 28.551 15.578 -1.920 2.602 -0.229 N6 ZBD 14
ZBD C32 C10 C 0 1 N N N N N N -2.886 28.318 15.059 -3.336 2.347 -0.508 C32 ZBD 15
ZBD C33 C11 C 0 1 N N N N N N -2.765 26.830 14.723 -3.610 0.844 -0.418 C33 ZBD 16
ZBD C34 C12 C 0 1 N N N N N N -1.410 26.574 14.072 -5.088 0.577 -0.710 C34 ZBD 17
ZBD C2 C13 C 0 1 N N N N N N -0.965 25.153 14.336 -5.358 -0.903 -0.620 C2 ZBD 18
ZBD N4 N3 N 0 1 N N N N N N 0.106 24.941 15.122 -6.601 -1.375 -0.841 N4 ZBD 19
ZBD C39 C14 C 0 1 N N N N N N 0.794 26.099 15.694 -7.689 -0.450 -1.167 C39 ZBD 20
ZBD C37 C15 C 0 1 N N R N N N 0.561 23.564 15.374 -6.863 -2.814 -0.754 C37 ZBD 21
ZBD C40 C16 C 0 1 N N N N N N -0.063 23.057 16.674 -7.386 -3.319 -2.101 C40 ZBD 22
ZBD C35 C17 C 0 1 N N N N N N 2.103 23.460 15.341 -7.910 -3.077 0.330 C35 ZBD 23
ZBD C38 C18 C 0 1 N N N N N N 2.790 23.616 16.706 -7.339 -2.687 1.695 C38 ZBD 24
ZBD O36 O3 O 0 1 N N N N N N 3.403 24.904 16.834 -8.316 -2.932 2.708 O36 ZBD 25
ZBD O3 O4 O 0 1 N N N N N N -1.555 24.208 13.846 -4.457 -1.668 -0.350 O3 ZBD 26
ZBD C27 C19 C 0 1 Y N N N N N -4.222 29.169 19.273 -1.255 2.882 3.443 C27 ZBD 27
ZBD C29 C20 C 0 1 Y N N N N N -6.440 29.277 18.391 0.756 3.177 2.186 C29 ZBD 28
ZBD C12 C21 C 0 1 Y N N N N N -9.657 25.904 14.249 4.059 0.369 0.613 C12 ZBD 29
ZBD C11 C22 C 0 1 Y N N N N N -10.037 25.155 15.350 4.141 -0.433 -0.510 C11 ZBD 30
ZBD C9 C23 C 0 1 Y N N N N N -9.217 26.902 16.791 2.835 1.153 -1.739 C9 ZBD 31
ZBD C14 C24 C 0 1 N N N N N N -10.670 23.793 15.141 4.897 -1.736 -0.451 C14 ZBD 32
ZBD O17 O5 O 0 1 N N N N N N -10.157 23.267 13.916 4.854 -2.369 -1.731 O17 ZBD 33
ZBD C16 C25 C 0 1 N N N N N N -12.205 23.905 15.039 4.253 -2.651 0.592 C16 ZBD 34
ZBD F20 F1 F 0 1 N N N N N N -12.815 23.541 16.239 2.923 -2.899 0.239 F20 ZBD 35
ZBD F19 F2 F 0 1 N N N N N N -12.668 23.058 14.026 4.954 -3.861 0.647 F19 ZBD 36
ZBD F18 F3 F 0 1 N N N N N N -12.587 25.211 14.722 4.295 -2.031 1.846 F18 ZBD 37
ZBD F21 F4 F 0 1 N N N N N N -10.952 23.125 17.461 7.080 -2.658 -0.125 F21 ZBD 38
ZBD F22 F5 F 0 1 N N N N N N -10.659 21.530 15.875 6.905 -0.535 -0.951 F22 ZBD 39
ZBD F23 F6 F 0 1 N N N N N N -8.912 22.828 16.506 6.401 -0.955 1.237 F23 ZBD 40
ZBD H1 H1 H 0 1 N N N N N N -8.466 29.627 14.988 2.051 3.663 -1.688 H1 ZBD 41
ZBD H2 H2 H 0 1 N N N N N N -8.590 29.464 16.772 2.450 3.971 0.019 H2 ZBD 42
ZBD H3 H3 H 0 1 N N N N N N -10.089 25.080 17.483 3.592 -0.669 -2.562 H3 ZBD 43
ZBD H4 H4 H 0 1 N N N N N N -8.783 27.728 13.550 3.302 2.191 1.436 H4 ZBD 44
ZBD H5 H5 H 0 1 N N N N N N -2.677 28.766 17.860 -3.021 2.518 2.311 H5 ZBD 45
ZBD H6 H6 H 0 1 N N N N N N -5.955 29.610 20.445 0.660 3.259 4.317 H6 ZBD 46
ZBD H7 H7 H 0 1 N N N N N N -2.140 28.592 15.820 -3.951 2.873 0.222 H7 ZBD 47
ZBD H8 H8 H 0 1 N N N N N N -2.724 28.921 14.153 -3.578 2.701 -1.510 H8 ZBD 48
ZBD H9 H9 H 0 1 N N N N N N -3.568 26.543 14.028 -2.994 0.318 -1.148 H9 ZBD 49
ZBD H10 H10 H 0 1 N N N N N N -2.849 26.236 15.645 -3.368 0.490 0.584 H10 ZBD 50
ZBD H11 H11 H 0 1 N N N N N N -0.668 27.271 14.490 -5.703 1.103 0.020 H11 ZBD 51
ZBD H12 H12 H 0 1 N N N N N N -1.492 26.734 12.987 -5.330 0.931 -1.712 H12 ZBD 52
ZBD H13 H13 H 0 1 N N N N N N 1.641 25.757 16.307 -7.743 -0.320 -2.248 H13 ZBD 53
ZBD H14 H14 H 0 1 N N N N N N 1.165 26.743 14.883 -8.632 -0.856 -0.802 H14 ZBD 54
ZBD H15 H15 H 0 1 N N N N N N 0.093 26.668 16.323 -7.501 0.513 -0.695 H15 ZBD 55
ZBD H16 H16 H 0 1 N N N N N N 0.179 22.929 14.561 -5.941 -3.337 -0.504 H16 ZBD 56
ZBD H17 H17 H 0 1 N N N N N N 0.274 22.028 16.866 -7.582 -4.389 -2.036 H17 ZBD 57
ZBD H18 H18 H 0 1 N N N N N N 0.246 23.706 17.507 -8.309 -2.796 -2.352 H18 ZBD 58
ZBD H19 H19 H 0 1 N N N N N N -1.159 23.073 16.585 -6.641 -3.132 -2.874 H19 ZBD 59
ZBD H20 H20 H 0 1 N N N N N N 2.371 22.474 14.934 -8.801 -2.484 0.126 H20 ZBD 60
ZBD H21 H21 H 0 1 N N N N N N 2.485 24.247 14.674 -8.171 -4.135 0.335 H21 ZBD 61
ZBD H22 H22 H 0 1 N N N N N N 2.039 23.495 17.501 -6.447 -3.280 1.899 H22 ZBD 62
ZBD H23 H23 H 0 1 N N N N N N 3.562 22.839 16.810 -7.078 -1.629 1.691 H23 ZBD 63
ZBD H24 H24 H 0 1 N N N N N N 3.819 24.974 17.685 -8.022 -2.708 3.601 H24 ZBD 64
ZBD H25 H25 H 0 1 N N N N N N -3.545 29.211 20.114 -1.766 2.837 4.393 H25 ZBD 65
ZBD H26 H26 H 0 1 N N N N N N -7.500 29.412 18.549 1.819 3.362 2.158 H26 ZBD 66
ZBD H27 H27 H 0 1 N N N N N N -9.820 25.516 13.254 4.536 0.062 1.532 H27 ZBD 67
ZBD H28 H28 H 0 1 N N N N N N -9.047 27.289 17.785 2.355 1.458 -2.657 H28 ZBD 68
ZBD H29 H29 H 0 1 N N N N N N -9.211 23.196 13.973 3.960 -2.571 -2.041 H29 ZBD 69
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ZBD O31 S5 DOUB N N 1
ZBD O3 C2 DOUB N N 2
ZBD O17 C14 SING N N 3
ZBD F19 C16 SING N N 4
ZBD C34 C2 SING N N 5
ZBD C34 C33 SING N N 6
ZBD C12 C13 DOUB Y N 7
ZBD C12 C11 SING Y N 8
ZBD O30 S5 DOUB N N 9
ZBD C2 N4 SING N N 10
ZBD C13 C8 SING Y N 11
ZBD S5 N6 SING N N 12
ZBD S5 N1 SING N N 13
ZBD F18 C16 SING N N 14
ZBD C33 C32 SING N N 15
ZBD C16 C14 SING N N 16
ZBD C16 F20 SING N N 17
ZBD C32 N6 SING N N 18
ZBD N4 C37 SING N N 19
ZBD N4 C39 SING N N 20
ZBD C14 C11 SING N N 21
ZBD C14 C15 SING N N 22
ZBD C35 C37 SING N N 23
ZBD C35 C38 SING N N 24
ZBD C11 C10 DOUB Y N 25
ZBD C37 C40 SING N N 26
ZBD N6 C25 SING N N 27
ZBD C8 C7 SING N N 28
ZBD C8 C9 DOUB Y N 29
ZBD C7 N1 SING N N 30
ZBD F22 C15 SING N N 31
ZBD N1 C24 SING N N 32
ZBD C15 F23 SING N N 33
ZBD C15 F21 SING N N 34
ZBD C10 C9 SING Y N 35
ZBD C38 O36 SING N N 36
ZBD C25 C24 DOUB Y N 37
ZBD C25 C26 SING Y N 38
ZBD C24 C29 SING Y N 39
ZBD C26 C27 DOUB Y N 40
ZBD C29 C28 DOUB Y N 41
ZBD C27 C28 SING Y N 42
ZBD C7 H1 SING N N 43
ZBD C7 H2 SING N N 44
ZBD C10 H3 SING N N 45
ZBD C13 H4 SING N N 46
ZBD C26 H5 SING N N 47
ZBD C28 H6 SING N N 48
ZBD C32 H7 SING N N 49
ZBD C32 H8 SING N N 50
ZBD C33 H9 SING N N 51
ZBD C33 H10 SING N N 52
ZBD C34 H11 SING N N 53
ZBD C34 H12 SING N N 54
ZBD C39 H13 SING N N 55
ZBD C39 H14 SING N N 56
ZBD C39 H15 SING N N 57
ZBD C37 H16 SING N N 58
ZBD C40 H17 SING N N 59
ZBD C40 H18 SING N N 60
ZBD C40 H19 SING N N 61
ZBD C35 H20 SING N N 62
ZBD C35 H21 SING N N 63
ZBD C38 H22 SING N N 64
ZBD C38 H23 SING N N 65
ZBD O36 H24 SING N N 66
ZBD C27 H25 SING N N 67
ZBD C29 H26 SING N N 68
ZBD C12 H27 SING N N 69
ZBD C9 H28 SING N N 70
ZBD O17 H29 SING N N 71
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ZBD SMILES ACDLabs 12.01 N2(c1ccccc1N(S2(=O)=O)CCCC(N(C(C)CCO)C)=O)Cc3ccc(cc3)C(C(F)(F)F)(O)C(F)(F)F
ZBD InChI InChI 1.03 InChI=1S/C25H29F6N3O5S/c1-17(13-15-35)32(2)22(36)8-5-14-33-20-6-3-4-7-21(20)34(40(33,38)39)16-18-9-11-19(12-10-18)23(37,24(26,27)28)25(29,30)31/h3-4,6-7,9-12,17,35,37H,5,8,13-16H2,1-2H3/t17-/m1/s1
ZBD InChIKey InChI 1.03 SULHDXFOLGGHOR-QGZVFWFLSA-N
ZBD SMILES_CANONICAL CACTVS 3.385 C[C@H](CCO)N(C)C(=O)CCCN1c2ccccc2N(Cc3ccc(cc3)C(O)(C(F)(F)F)C(F)(F)F)[S]1(=O)=O
ZBD SMILES CACTVS 3.385 C[CH](CCO)N(C)C(=O)CCCN1c2ccccc2N(Cc3ccc(cc3)C(O)(C(F)(F)F)C(F)(F)F)[S]1(=O)=O
ZBD SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 C[C@H](CCO)N(C)C(=O)CCCN1c2ccccc2N(S1(=O)=O)Cc3ccc(cc3)C(C(F)(F)F)(C(F)(F)F)O
ZBD SMILES "OpenEye OEToolkits" 1.9.2 CC(CCO)N(C)C(=O)CCCN1c2ccccc2N(S1(=O)=O)Cc3ccc(cc3)C(C(F)(F)F)(C(F)(F)F)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ZBD "SYSTEMATIC NAME" ACDLabs 12.01 4-{3-[4-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)benzyl]-2,2-dioxido-2,1,3-benzothiadiazol-1(3H)-yl}-N-[(2R)-4-hydroxybutan-2-yl]-N-methylbutanamide
ZBD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 4-[3-[[4-[1,1,1,3,3,3-hexakis(fluoranyl)-2-oxidanyl-propan-2-yl]phenyl]methyl]-2,2-bis(oxidanylidene)-2$l^{6},1,3-benzothiadiazol-1-yl]-N-methyl-N-[(2R)-4-oxidanylbutan-2-yl]butanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ZBD 'Create component' 2015-03-09 RCSB
ZBD 'Initial release' 2015-04-22 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ZBD N1 N 8.659 3.104 1
ZBD C7 C 9.125 4.530 2
ZBD C8 C 8.123 5.646 3
ZBD C10 C 7.588 8.188 4
ZBD C13 C 6.656 5.337 5
ZBD C15 C 6.235 9.997 6
ZBD C24 C 7.240 2.647 7
ZBD C26 C 5.941 0.397 8
ZBD C28 C 4.642 2.647 9
ZBD O31 O 10.748 1.015 10
ZBD S5 S 9.535 1.897 11
ZBD O30 O 10.748 2.779 12
ZBD C25 C 7.240 1.147 13
ZBD N6 N 8.659 0.690 14
ZBD C32 C 9.125 -0.736 15
ZBD C33 C 8.123 -1.852 16
ZBD C34 C 8.589 -3.278 17
ZBD C2 C 7.588 -4.395 18
ZBD N4 N 8.054 -5.821 19
ZBD C39 C 9.521 -6.130 20
ZBD C37 C 7.052 -6.937 21
ZBD C40 C 5.584 -6.628 22
ZBD C35 C 7.518 -8.363 23
ZBD C38 C 6.516 -9.479 24
ZBD O36 O 6.982 -10.905 25
ZBD O3 O 6.120 -4.085 26
ZBD C27 C 4.642 1.147 27
ZBD C29 C 5.941 3.397 28
ZBD C12 C 5.654 6.453 29
ZBD C11 C 6.120 7.879 30
ZBD C9 C 8.589 7.072 31
ZBD C14 C 5.118 8.996 32
ZBD O17 O 4.002 7.994 33
ZBD C16 C 4.117 10.112 34
ZBD F20 F 3.000 9.110 35
ZBD F19 F 3.115 11.229 36
ZBD F18 F 4.328 11.597 37
ZBD F21 F 7.720 9.786 38
ZBD F22 F 7.351 10.999 39
ZBD F23 F 5.233 11.114 40
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ZBD O31 S5 DOUBLE NONE 1
ZBD O3 C2 DOUBLE NONE 2
ZBD O17 C14 SINGLE NONE 3
ZBD F19 C16 SINGLE NONE 4
ZBD C34 C2 SINGLE NONE 5
ZBD C34 C33 SINGLE NONE 6
ZBD C12 C13 DOUBLE NONE 7
ZBD C12 C11 SINGLE NONE 8
ZBD O30 S5 DOUBLE NONE 9
ZBD C2 N4 SINGLE NONE 10
ZBD C13 C8 SINGLE NONE 11
ZBD S5 N6 SINGLE NONE 12
ZBD S5 N1 SINGLE NONE 13
ZBD F18 C16 SINGLE NONE 14
ZBD C33 C32 SINGLE NONE 15
ZBD C16 C14 SINGLE NONE 16
ZBD C16 F20 SINGLE NONE 17
ZBD C32 N6 SINGLE NONE 18
ZBD N4 C37 SINGLE NONE 19
ZBD N4 C39 SINGLE NONE 20
ZBD C14 C11 SINGLE NONE 21
ZBD C14 C15 SINGLE NONE 22
ZBD C35 C37 SINGLE NONE 23
ZBD C35 C38 SINGLE NONE 24
ZBD C11 C10 DOUBLE NONE 25
ZBD C37 C40 SINGLE BEGINWEDGE 26
ZBD N6 C25 SINGLE NONE 27
ZBD C8 C7 SINGLE NONE 28
ZBD C8 C9 DOUBLE NONE 29
ZBD C7 N1 SINGLE NONE 30
ZBD F22 C15 SINGLE NONE 31
ZBD N1 C24 SINGLE NONE 32
ZBD C15 F23 SINGLE NONE 33
ZBD C15 F21 SINGLE NONE 34
ZBD C10 C9 SINGLE NONE 35
ZBD C38 O36 SINGLE NONE 36
ZBD C25 C24 SINGLE NONE 37
ZBD C25 C26 DOUBLE NONE 38
ZBD C24 C29 DOUBLE NONE 39
ZBD C26 C27 SINGLE NONE 40
ZBD C29 C28 SINGLE NONE 41
ZBD C27 C28 DOUBLE NONE 42
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ZBD MurckoScaffold S1 scaffold O=S1(=O)Nc2ccccc2N1Cc1ccccc1 InChI=1S/C13H12N2O2S/c16-18(17)14-12-8-4-5-9-13(12)15(18)10-11-6-2-1-3-7-11/h1-9,14H,10H2 APFIJQABIAMYSI-UHFFFAOYSA-N
ZBD amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
ZBD phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ZBD N1 S1 1
ZBD C7 S1 1
ZBD C8 S1 1
ZBD C10 S1 1
ZBD C13 S1 1
ZBD C24 S1 1
ZBD C26 S1 1
ZBD C28 S1 1
ZBD O31 S1 1
ZBD S5 S1 1
ZBD O30 S1 1
ZBD C25 S1 1
ZBD N6 S1 1
ZBD C27 S1 1
ZBD C29 S1 1
ZBD C12 S1 1
ZBD C11 S1 1
ZBD C9 S1 1
ZBD N4 F1 1
ZBD C2 F1 1
ZBD O3 F1 1
ZBD C34 F1 1
ZBD C8 F2 1
ZBD C13 F2 1
ZBD C12 F2 1
ZBD C11 F2 1
ZBD C10 F2 1
ZBD C9 F2 1
ZBD C24 F2 2
ZBD C25 F2 2
ZBD C26 F2 2
ZBD C27 F2 2
ZBD C28 F2 2
ZBD C29 F2 2
#
_pdbe_chem_comp_rdkit_properties.comp_id ZBD
_pdbe_chem_comp_rdkit_properties.exactmw 597.173
_pdbe_chem_comp_rdkit_properties.amw 597.578
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 40
_pdbe_chem_comp_rdkit_properties.NumAtoms 69
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 15
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.480
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 268.063
_pdbe_chem_comp_rdkit_properties.tpsa 101.390
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.209
_pdbe_chem_comp_rdkit_properties.CrippenMR 132.328
_pdbe_chem_comp_rdkit_properties.chi0v 19.375
_pdbe_chem_comp_rdkit_properties.chi1v 10.907
_pdbe_chem_comp_rdkit_properties.chi2v 5.899
_pdbe_chem_comp_rdkit_properties.chi3v 5.899
_pdbe_chem_comp_rdkit_properties.chi4v 3.873
_pdbe_chem_comp_rdkit_properties.chi0n 47.559
_pdbe_chem_comp_rdkit_properties.chi1n 23.826
_pdbe_chem_comp_rdkit_properties.chi2n 4.428
_pdbe_chem_comp_rdkit_properties.chi3n 4.428
_pdbe_chem_comp_rdkit_properties.chi4n 2.617
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.040
_pdbe_chem_comp_rdkit_properties.kappa1 10.348
_pdbe_chem_comp_rdkit_properties.kappa2 11.448
_pdbe_chem_comp_rdkit_properties.kappa3 5.858
_pdbe_chem_comp_rdkit_properties.Phi 2.962
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ZBD UniChem PDBe ZBD
ZBD UniChem ZINC ZINC000231374928
ZBD UniChem PubChem 91668550
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ZBD N1 -2.647 -0.064 -3.184 ETKDGv3 1
ZBD C7 -3.837 -0.459 -2.427 ETKDGv3 2
ZBD C8 -3.522 -0.572 -0.957 ETKDGv3 3
ZBD C10 -2.542 -1.732 0.963 ETKDGv3 4
ZBD C13 -3.839 0.549 -0.044 ETKDGv3 5
ZBD C15 -3.295 0.016 4.245 ETKDGv3 6
ZBD C24 -1.558 -0.921 -3.555 ETKDGv3 7
ZBD C26 0.811 -0.869 -4.170 ETKDGv3 8
ZBD C28 -0.403 -2.998 -4.072 ETKDGv3 9
ZBD O31 -2.739 2.364 -4.286 ETKDGv3 10
ZBD S5 -2.045 1.554 -3.228 ETKDGv3 11
ZBD O30 -2.127 2.213 -1.881 ETKDGv3 12
ZBD C25 -0.298 -0.201 -3.819 ETKDGv3 13
ZBD N6 -0.410 1.220 -3.667 ETKDGv3 14
ZBD C32 0.684 2.189 -3.557 ETKDGv3 15
ZBD C33 1.108 2.423 -2.099 ETKDGv3 16
ZBD C34 1.469 1.122 -1.365 ETKDGv3 17
ZBD C2 2.038 1.362 0.012 ETKDGv3 18
ZBD N4 2.746 0.314 0.710 ETKDGv3 19
ZBD C39 2.471 -1.088 0.361 ETKDGv3 20
ZBD C37 3.628 0.653 1.847 ETKDGv3 21
ZBD C40 4.996 -0.035 1.700 ETKDGv3 22
ZBD C35 2.929 0.309 3.181 ETKDGv3 23
ZBD C38 3.671 0.835 4.418 ETKDGv3 24
ZBD O36 3.812 2.230 4.367 ETKDGv3 25
ZBD O3 1.850 2.475 0.579 ETKDGv3 26
ZBD C27 0.750 -2.344 -4.295 ETKDGv3 27
ZBD C29 -1.626 -2.254 -3.690 ETKDGv3 28
ZBD C12 -3.507 0.487 1.251 ETKDGv3 29
ZBD C11 -2.836 -0.723 1.811 ETKDGv3 30
ZBD C9 -2.909 -1.659 -0.465 ETKDGv3 31
ZBD C14 -2.370 -0.787 3.278 ETKDGv3 32
ZBD O17 -2.356 -2.129 3.714 ETKDGv3 33
ZBD C16 -0.916 -0.261 3.355 ETKDGv3 34
ZBD F20 -0.823 1.019 2.835 ETKDGv3 35
ZBD F19 -0.475 -0.243 4.667 ETKDGv3 36
ZBD F18 -0.076 -1.089 2.630 ETKDGv3 37
ZBD F21 -3.044 -0.357 5.555 ETKDGv3 38
ZBD F22 -4.625 -0.254 3.971 ETKDGv3 39
ZBD F23 -3.086 1.381 4.146 ETKDGv3 40
ZBD H1 -4.239 -1.420 -2.810 ETKDGv3 41
ZBD H2 -4.635 0.298 -2.587 ETKDGv3 42
ZBD H3 -2.012 -2.612 1.304 ETKDGv3 43
ZBD H4 -4.332 1.434 -0.425 ETKDGv3 44
ZBD H5 1.743 -0.360 -4.370 ETKDGv3 45
ZBD H6 -0.442 -4.075 -4.171 ETKDGv3 46
ZBD H7 1.558 1.862 -4.156 ETKDGv3 47
ZBD H8 0.349 3.157 -3.988 ETKDGv3 48
ZBD H9 1.993 3.097 -2.103 ETKDGv3 49
ZBD H10 0.294 2.946 -1.554 ETKDGv3 50
ZBD H11 0.559 0.494 -1.256 ETKDGv3 51
ZBD H12 2.219 0.569 -1.968 ETKDGv3 52
ZBD H13 1.376 -1.264 0.332 ETKDGv3 53
ZBD H14 2.908 -1.321 -0.632 ETKDGv3 54
ZBD H15 2.902 -1.789 1.104 ETKDGv3 55
ZBD H16 3.834 1.746 1.834 ETKDGv3 56
ZBD H17 5.366 0.079 0.659 ETKDGv3 57
ZBD H18 5.739 0.438 2.375 ETKDGv3 58
ZBD H19 4.938 -1.116 1.945 ETKDGv3 59
ZBD H20 2.812 -0.792 3.278 ETKDGv3 60
ZBD H21 1.911 0.753 3.173 ETKDGv3 61
ZBD H22 3.111 0.543 5.335 ETKDGv3 62
ZBD H23 4.676 0.371 4.489 ETKDGv3 63
ZBD H24 2.915 2.613 4.554 ETKDGv3 64
ZBD H25 1.639 -2.895 -4.573 ETKDGv3 65
ZBD H26 -2.549 -2.794 -3.531 ETKDGv3 66
ZBD H27 -3.739 1.337 1.873 ETKDGv3 67
ZBD H28 -2.661 -2.494 -1.105 ETKDGv3 68
ZBD H29 -3.281 -2.483 3.642 ETKDGv3 69
#