data_ZK9 # _chem_comp.id ZK9 _chem_comp.name "[3-AMINOMETHYLPHENYL-OXY-]-[BENZAMIDIN-3-YLOXY]-3,5-DIFLUORO-4-METHYL-PYRIDINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H20 F2 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ZK-806299 _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 1999-08-24 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 386.395 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZK9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1CU7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZK9 C1 C1 C 0 1 Y N N N N N 10.422 18.894 20.729 4.285 0.044 1.478 C1 ZK9 1 ZK9 C2 C2 C 0 1 Y N N N N N 9.363 19.380 19.928 4.395 -0.622 0.257 C2 ZK9 2 ZK9 C3 C3 C 0 1 Y N N N N N 8.831 20.662 20.196 3.356 -0.548 -0.669 C3 ZK9 3 ZK9 C4 C4 C 0 1 Y N N N N N 9.343 21.438 21.265 2.225 0.196 -0.376 C4 ZK9 4 ZK9 C5 C5 C 0 1 Y N N N N N 10.368 20.911 22.084 2.123 0.856 0.841 C5 ZK9 5 ZK9 C6 C6 C 0 1 Y N N N N N 10.920 19.654 21.799 3.151 0.778 1.763 C6 ZK9 6 ZK9 O7 O7 O 0 1 N N N N N N 8.723 22.598 21.628 1.212 0.276 -1.278 O7 ZK9 7 ZK9 C8 C8 C 0 1 Y N N N N N 9.532 23.707 21.678 0.177 0.893 -0.653 C8 ZK9 8 ZK9 N9 N9 N 0 1 Y N N N N N 10.179 24.192 20.571 -0.470 0.267 0.316 N9 ZK9 9 ZK9 C10 C10 C 0 1 Y N N N N N 10.982 25.309 20.647 -1.484 0.832 0.952 C10 ZK9 10 ZK9 C11 C11 C 0 1 Y N N N N N 9.729 24.321 22.949 -0.194 2.175 -1.041 C11 ZK9 11 ZK9 C12 C12 C 0 1 Y N N N N N 10.502 25.493 23.059 -1.249 2.800 -0.393 C12 ZK9 12 ZK9 C13 C13 C 0 1 Y N N N N N 11.116 26.004 21.897 -1.905 2.113 0.619 C13 ZK9 13 ZK9 O14 O14 O 0 1 N N N N N N 11.627 25.833 19.550 -2.119 0.152 1.940 O14 ZK9 14 ZK9 C15 C15 C 0 1 Y N N N N N 11.340 25.336 18.301 -2.737 -0.907 1.354 C15 ZK9 15 ZK9 C16 C16 C 0 1 Y N N N N N 10.221 25.841 17.609 -3.602 -1.703 2.091 C16 ZK9 16 ZK9 C17 C17 C 0 1 Y N N N N N 10.044 25.577 16.242 -4.228 -2.779 1.493 C17 ZK9 17 ZK9 C18 C18 C 0 1 Y N N N N N 10.974 24.783 15.550 -3.994 -3.063 0.160 C18 ZK9 18 ZK9 C19 C19 C 0 1 Y N N N N N 12.059 24.209 16.235 -3.132 -2.272 -0.577 C19 ZK9 19 ZK9 C20 C20 C 0 1 Y N N N N N 12.255 24.504 17.605 -2.508 -1.191 0.015 C20 ZK9 20 ZK9 C21 C21 C 0 1 N N N N N N 13.045 23.341 15.477 -2.879 -2.585 -2.029 C21 ZK9 21 ZK9 N22 N22 N 1 1 N N N N N N 14.196 24.160 15.062 -3.855 -1.870 -2.862 N22 ZK9 22 ZK9 C23 C23 C 0 1 N N N N N N 8.788 18.508 18.877 5.610 -1.410 -0.051 C23 ZK9 23 ZK9 N24 N24 N 0 1 N N N N N N 8.085 18.922 17.863 6.599 -1.483 0.837 N24 ZK9 24 ZK9 N25 N25 N 1 1 N N N N N N 8.951 17.223 18.921 5.713 -2.045 -1.217 N25 ZK9 25 ZK9 F26 F26 F 0 1 N N N N N N 9.176 23.797 24.033 0.471 2.809 -2.032 F26 ZK9 26 ZK9 C27 C27 C 0 1 N N N N N N 10.712 26.169 24.411 -1.678 4.191 -0.782 C27 ZK9 27 ZK9 F28 F28 F 0 1 N N N N N N 11.797 27.142 22.002 -2.941 2.683 1.272 F28 ZK9 28 ZK9 H29 H29 H 0 1 N N N N N N 10.868 17.927 20.537 5.086 -0.013 2.200 H29 ZK9 29 ZK9 H30 H30 H 0 1 N N N N N N 8.005 21.053 19.621 3.436 -1.062 -1.615 H30 ZK9 30 ZK9 H31 H31 H 0 1 N N N N N N 10.721 21.476 22.937 1.239 1.432 1.069 H31 ZK9 31 ZK9 H32 H32 H 0 1 N N N N N N 11.727 19.280 22.413 3.067 1.294 2.708 H32 ZK9 32 ZK9 H33 H33 H 0 1 N N N N N N 9.539 26.486 18.132 -3.785 -1.482 3.133 H33 ZK9 33 ZK9 H34 H34 H 0 1 N N N N N N 9.207 26.023 15.725 -4.902 -3.399 2.066 H34 ZK9 34 ZK9 H35 H35 H 0 1 N N N N N N 10.860 24.617 14.487 -4.485 -3.905 -0.306 H35 ZK9 35 ZK9 H36 H36 H 0 1 N N N N N N 13.130 24.151 18.127 -1.835 -0.573 -0.561 H36 ZK9 36 ZK9 H37 H37 H 0 1 N N N N N N 13.394 22.572 16.165 -1.871 -2.269 -2.299 H37 ZK9 37 ZK9 H38 H38 H 0 1 N N N N N N 12.568 22.872 14.615 -2.979 -3.658 -2.193 H38 ZK9 38 ZK9 H39 H39 H 0 1 N N N N N N 14.042 24.612 14.164 -4.788 -2.162 -2.613 H39 ZK9 39 ZK9 H45 H45 H 0 1 N N N N N N 14.410 24.858 15.771 -3.763 -0.877 -2.711 H45 ZK9 40 ZK9 H46 H46 H 0 1 N N N N N N 15.046 23.609 14.985 -3.686 -2.079 -3.834 H46 ZK9 41 ZK9 H40 H40 H 0 1 N N N N N N 7.630 18.200 17.299 7.395 -1.999 0.634 H40 ZK9 42 ZK9 H48 H48 H 0 1 N N N N N N 7.855 19.897 17.694 6.524 -1.020 1.686 H48 ZK9 43 ZK9 H41 H41 H 0 1 N N N N N N 8.464 16.622 18.251 4.992 -1.992 -1.864 H41 ZK9 44 ZK9 H47 H47 H 0 1 N N N N N N 9.321 16.773 19.747 6.509 -2.561 -1.419 H47 ZK9 45 ZK9 H42 H42 H 0 1 N N N N N N 9.891 25.949 25.096 -1.129 4.920 -0.187 H42 ZK9 46 ZK9 H43 H43 H 0 1 N N N N N N 10.770 27.248 24.292 -1.467 4.353 -1.840 H43 ZK9 47 ZK9 H44 H44 H 0 1 N N N N N N 11.644 25.814 24.851 -2.747 4.305 -0.603 H44 ZK9 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZK9 C1 C2 DOUB Y N 1 ZK9 C1 C6 SING Y N 2 ZK9 C1 H29 SING N N 3 ZK9 C2 C3 SING Y N 4 ZK9 C2 C23 SING N N 5 ZK9 C3 C4 DOUB Y N 6 ZK9 C3 H30 SING N N 7 ZK9 C4 C5 SING Y N 8 ZK9 C4 O7 SING N N 9 ZK9 C5 C6 DOUB Y N 10 ZK9 C5 H31 SING N N 11 ZK9 C6 H32 SING N N 12 ZK9 O7 C8 SING N N 13 ZK9 C8 N9 DOUB Y N 14 ZK9 C8 C11 SING Y N 15 ZK9 N9 C10 SING Y N 16 ZK9 C10 C13 DOUB Y N 17 ZK9 C10 O14 SING N N 18 ZK9 C11 C12 DOUB Y N 19 ZK9 C11 F26 SING N N 20 ZK9 C12 C13 SING Y N 21 ZK9 C12 C27 SING N N 22 ZK9 C13 F28 SING N N 23 ZK9 O14 C15 SING N N 24 ZK9 C15 C16 DOUB Y N 25 ZK9 C15 C20 SING Y N 26 ZK9 C16 C17 SING Y N 27 ZK9 C16 H33 SING N N 28 ZK9 C17 C18 DOUB Y N 29 ZK9 C17 H34 SING N N 30 ZK9 C18 C19 SING Y N 31 ZK9 C18 H35 SING N N 32 ZK9 C19 C20 DOUB Y N 33 ZK9 C19 C21 SING N N 34 ZK9 C20 H36 SING N N 35 ZK9 C21 N22 SING N N 36 ZK9 C21 H37 SING N N 37 ZK9 C21 H38 SING N N 38 ZK9 N22 H39 SING N N 39 ZK9 N22 H45 SING N N 40 ZK9 N22 H46 SING N N 41 ZK9 C23 N24 SING N N 42 ZK9 C23 N25 DOUB N N 43 ZK9 N24 H40 SING N N 44 ZK9 N24 H48 SING N N 45 ZK9 N25 H41 SING N N 46 ZK9 N25 H47 SING N N 47 ZK9 C27 H42 SING N N 48 ZK9 C27 H43 SING N N 49 ZK9 C27 H44 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZK9 SMILES ACDLabs 10.04 Fc3c(Oc1cc(C(=[NH2+])\N)ccc1)nc(Oc2cccc(c2)C[NH3+])c(F)c3C ZK9 SMILES_CANONICAL CACTVS 3.341 Cc1c(F)c(Oc2cccc(C[NH3+])c2)nc(Oc3cccc(c3)C(N)=[NH2+])c1F ZK9 SMILES CACTVS 3.341 Cc1c(F)c(Oc2cccc(C[NH3+])c2)nc(Oc3cccc(c3)C(N)=[NH2+])c1F ZK9 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 Cc1c(c(nc(c1F)Oc2cccc(c2)C(=[NH2+])N)Oc3cccc(c3)C[NH3+])F ZK9 SMILES "OpenEye OEToolkits" 1.5.0 Cc1c(c(nc(c1F)Oc2cccc(c2)C(=[NH2+])N)Oc3cccc(c3)C[NH3+])F ZK9 InChI InChI 1.03 InChI=1S/C20H18F2N4O2/c1-11-16(21)19(27-14-6-2-4-12(8-14)10-23)26-20(17(11)22)28-15-7-3-5-13(9-15)18(24)25/h2-9H,10,23H2,1H3,(H3,24,25)/p+2 ZK9 InChIKey InChI 1.03 GJHKKJHVSXUANP-UHFFFAOYSA-P # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZK9 "SYSTEMATIC NAME" ACDLabs 10.04 {amino[3-({6-[3-(ammoniomethyl)phenoxy]-3,5-difluoro-4-methylpyridin-2-yl}oxy)phenyl]methylidene}ammonium ZK9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[3-[6-[3-(amino-azaniumylidene-methyl)phenoxy]-3,5-difluoro-4-methyl-pyridin-2-yl]oxyphenyl]methylazanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZK9 'Create component' 1999-08-24 EBI ZK9 'Modify descriptor' 2011-06-04 RCSB ZK9 'Modify synonyms' 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id ZK9 _pdbx_chem_comp_synonyms.name ZK-806299 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbe_chem_comp_synonyms.comp_id ZK9 _pdbe_chem_comp_synonyms.name ZK-806299 _pdbe_chem_comp_synonyms.provenance wwPDB _pdbe_chem_comp_synonyms.type ? # loop_ _software.name _software.version _software.description rdkit 2023.03.3 'Core functionality.' pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal ZK9 C1 C 15.497 -3.518 1 ZK9 C2 C 16.796 -2.768 2 ZK9 C3 C 16.796 -1.268 3 ZK9 C4 C 15.497 -0.517 4 ZK9 C5 C 14.198 -1.268 5 ZK9 C6 C 14.198 -2.768 6 ZK9 O7 O 15.497 0.983 7 ZK9 C8 C 14.198 1.732 8 ZK9 N9 N 12.899 0.983 9 ZK9 C10 C 11.600 1.732 10 ZK9 C11 C 14.198 3.232 11 ZK9 C12 C 12.899 3.982 12 ZK9 C13 C 11.600 3.232 13 ZK9 O14 O 10.301 0.983 14 ZK9 C15 C 9.002 1.732 15 ZK9 C16 C 9.002 3.232 16 ZK9 C17 C 7.702 3.982 17 ZK9 C18 C 6.404 3.232 18 ZK9 C19 C 6.404 1.732 19 ZK9 C20 C 7.702 0.983 20 ZK9 C21 C 5.104 0.983 21 ZK9 N22 N 3.805 1.732 22 ZK9 C23 C 18.095 -3.518 23 ZK9 N24 N 19.394 -2.768 24 ZK9 N25 N 18.095 -5.018 25 ZK9 F26 F 15.497 3.982 26 ZK9 C27 C 12.899 5.482 27 ZK9 F28 F 10.301 3.982 28 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal ZK9 C1 C2 DOUBLE NONE 1 ZK9 C1 C6 SINGLE NONE 2 ZK9 C2 C3 SINGLE NONE 3 ZK9 C2 C23 SINGLE NONE 4 ZK9 C3 C4 DOUBLE NONE 5 ZK9 C4 C5 SINGLE NONE 6 ZK9 C4 O7 SINGLE NONE 7 ZK9 C5 C6 DOUBLE NONE 8 ZK9 O7 C8 SINGLE NONE 9 ZK9 C8 N9 DOUBLE NONE 10 ZK9 C8 C11 SINGLE NONE 11 ZK9 N9 C10 SINGLE NONE 12 ZK9 C10 C13 DOUBLE NONE 13 ZK9 C10 O14 SINGLE NONE 14 ZK9 C11 C12 DOUBLE NONE 15 ZK9 C11 F26 SINGLE NONE 16 ZK9 C12 C13 SINGLE NONE 17 ZK9 C12 C27 SINGLE NONE 18 ZK9 C13 F28 SINGLE NONE 19 ZK9 O14 C15 SINGLE NONE 20 ZK9 C15 C16 DOUBLE NONE 21 ZK9 C15 C20 SINGLE NONE 22 ZK9 C16 C17 SINGLE NONE 23 ZK9 C17 C18 DOUBLE NONE 24 ZK9 C18 C19 SINGLE NONE 25 ZK9 C19 C20 DOUBLE NONE 26 ZK9 C19 C21 SINGLE NONE 27 ZK9 C21 N22 SINGLE NONE 28 ZK9 C23 N24 SINGLE NONE 29 ZK9 C23 N25 DOUBLE NONE 30 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys ZK9 MurckoScaffold S1 scaffold c1ccc(Oc2cccc(Oc3ccccc3)n2)cc1 InChI=1S/C17H13NO2/c1-3-8-14(9-4-1)19-16-12-7-13-17(18-16)20-15-10-5-2-6-11-15/h1-13H HNMMGGMSQSKUMF-UHFFFAOYSA-N ZK9 phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N ZK9 pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal ZK9 C1 S1 1 ZK9 C2 S1 1 ZK9 C3 S1 1 ZK9 C4 S1 1 ZK9 C5 S1 1 ZK9 C6 S1 1 ZK9 O7 S1 1 ZK9 C8 S1 1 ZK9 N9 S1 1 ZK9 C10 S1 1 ZK9 C11 S1 1 ZK9 C12 S1 1 ZK9 C13 S1 1 ZK9 O14 S1 1 ZK9 C15 S1 1 ZK9 C16 S1 1 ZK9 C17 S1 1 ZK9 C18 S1 1 ZK9 C19 S1 1 ZK9 C20 S1 1 ZK9 C1 F1 1 ZK9 C2 F1 1 ZK9 C3 F1 1 ZK9 C4 F1 1 ZK9 C5 F1 1 ZK9 C6 F1 1 ZK9 C15 F1 2 ZK9 C16 F1 2 ZK9 C17 F1 2 ZK9 C18 F1 2 ZK9 C19 F1 2 ZK9 C20 F1 2 ZK9 C8 F2 1 ZK9 C11 F2 1 ZK9 C12 F2 1 ZK9 C13 F2 1 ZK9 C10 F2 1 ZK9 N9 F2 1 # _pdbe_chem_comp_rdkit_properties.comp_id ZK9 _pdbe_chem_comp_rdkit_properties.exactmw 386.154 _pdbe_chem_comp_rdkit_properties.amw 386.402 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 6 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 7 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8 _pdbe_chem_comp_rdkit_properties.NumHBD 3 _pdbe_chem_comp_rdkit_properties.NumHBA 3 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 28 _pdbe_chem_comp_rdkit_properties.NumAtoms 48 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 0 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.100 _pdbe_chem_comp_rdkit_properties.NumRings 3 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 3 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 188.289 _pdbe_chem_comp_rdkit_properties.tpsa 110.600 _pdbe_chem_comp_rdkit_properties.CrippenClogP -0.555 _pdbe_chem_comp_rdkit_properties.CrippenMR 95.498 _pdbe_chem_comp_rdkit_properties.chi0v 13.361 _pdbe_chem_comp_rdkit_properties.chi1v 7.062 _pdbe_chem_comp_rdkit_properties.chi2v 2.955 _pdbe_chem_comp_rdkit_properties.chi3v 2.955 _pdbe_chem_comp_rdkit_properties.chi4v 1.752 _pdbe_chem_comp_rdkit_properties.chi0n 33.361 _pdbe_chem_comp_rdkit_properties.chi1n 16.693 _pdbe_chem_comp_rdkit_properties.chi2n 2.955 _pdbe_chem_comp_rdkit_properties.chi3n 2.955 _pdbe_chem_comp_rdkit_properties.chi4n 1.752 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.520 _pdbe_chem_comp_rdkit_properties.kappa1 6.247 _pdbe_chem_comp_rdkit_properties.kappa2 8.013 _pdbe_chem_comp_rdkit_properties.kappa3 4.070 _pdbe_chem_comp_rdkit_properties.Phi 1.788 # loop_ _pdbe_chem_comp_external_mappings.comp_id _pdbe_chem_comp_external_mappings.source _pdbe_chem_comp_external_mappings.resource _pdbe_chem_comp_external_mappings.resource_id ZK9 UniChem PDBe ZK9 ZK9 UniChem PubChem 4655927 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal ZK9 C1 -5.635 2.557 -0.945 ETKDGv3 1 ZK9 C2 -5.201 1.357 -0.518 ETKDGv3 2 ZK9 C3 -3.782 0.977 -0.753 ETKDGv3 3 ZK9 C4 -2.939 1.826 -1.373 ETKDGv3 4 ZK9 C5 -3.445 3.128 -1.856 ETKDGv3 5 ZK9 C6 -4.719 3.476 -1.649 ETKDGv3 6 ZK9 O7 -1.598 1.497 -1.618 ETKDGv3 7 ZK9 C8 -0.813 0.654 -0.820 ETKDGv3 8 ZK9 N9 0.062 -0.117 -1.398 ETKDGv3 9 ZK9 C10 0.913 -1.007 -0.659 ETKDGv3 10 ZK9 C11 -0.923 0.652 0.661 ETKDGv3 11 ZK9 C12 -0.174 -0.203 1.380 ETKDGv3 12 ZK9 C13 0.793 -1.083 0.680 ETKDGv3 13 ZK9 O14 1.816 -1.812 -1.366 ETKDGv3 14 ZK9 C15 3.154 -2.027 -1.006 ETKDGv3 15 ZK9 C16 3.786 -3.110 -1.481 ETKDGv3 16 ZK9 C17 5.198 -3.364 -1.131 ETKDGv3 17 ZK9 C18 5.859 -2.511 -0.342 ETKDGv3 18 ZK9 C19 5.180 -1.303 0.186 ETKDGv3 19 ZK9 C20 3.899 -1.066 -0.149 ETKDGv3 20 ZK9 C21 5.951 -0.316 1.023 ETKDGv3 21 ZK9 N22 6.576 0.701 0.179 ETKDGv3 22 ZK9 C23 -6.122 0.425 0.181 ETKDGv3 23 ZK9 N24 -7.104 0.937 1.091 ETKDGv3 24 ZK9 N25 -6.046 -0.856 -0.025 ETKDGv3 25 ZK9 F26 -1.738 1.542 1.284 ETKDGv3 26 ZK9 C27 -0.241 -0.201 2.881 ETKDGv3 27 ZK9 F28 1.530 -1.977 1.388 ETKDGv3 28 ZK9 H29 -6.666 2.859 -0.808 ETKDGv3 29 ZK9 H30 -3.427 0.012 -0.418 ETKDGv3 30 ZK9 H31 -2.778 3.805 -2.374 ETKDGv3 31 ZK9 H32 -5.083 4.433 -2.000 ETKDGv3 32 ZK9 H33 3.262 -3.810 -2.119 ETKDGv3 33 ZK9 H34 5.696 -4.244 -1.518 ETKDGv3 34 ZK9 H35 6.896 -2.703 -0.094 ETKDGv3 35 ZK9 H36 3.411 -0.162 0.193 ETKDGv3 36 ZK9 H37 5.275 0.173 1.760 ETKDGv3 37 ZK9 H38 6.736 -0.850 1.603 ETKDGv3 38 ZK9 H39 7.110 1.367 0.783 ETKDGv3 39 ZK9 H45 7.236 0.251 -0.496 ETKDGv3 40 ZK9 H46 5.842 1.232 -0.345 ETKDGv3 41 ZK9 H40 -7.127 1.948 1.347 ETKDGv3 42 ZK9 H48 -7.785 0.296 1.556 ETKDGv3 43 ZK9 H41 -6.688 -1.515 0.471 ETKDGv3 44 ZK9 H47 -5.367 -1.265 -0.705 ETKDGv3 45 ZK9 H42 0.129 -1.161 3.297 ETKDGv3 46 ZK9 H43 0.382 0.627 3.279 ETKDGv3 47 ZK9 H44 -1.289 -0.068 3.227 ETKDGv3 48 #