data_ZMK
#
_chem_comp.id ZMK
_chem_comp.name
"methyl 7-{[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}-7-oxoheptanoate"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H35 N2 O10 P S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-05-01
_chem_comp.pdbx_modified_date 2012-10-12
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 514.527
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ZMK
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4ETW
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ZMK OAE OAE O 0 1 N N N N N N -12.660 -10.923 25.965 12.586 -2.655 -0.518 OAE ZMK 1
ZMK CBB CBB C 0 1 N N N N N N -13.646 -11.282 25.352 13.077 -1.645 -0.072 CBB ZMK 2
ZMK OAX OAX O 0 1 N N N N N N -13.782 -12.674 24.980 14.407 -1.558 0.086 OAX ZMK 3
ZMK CAA CAA C 0 1 N N N N N N -13.702 -13.746 25.938 15.193 -2.717 -0.299 CAA ZMK 4
ZMK CAR CAR C 0 1 N N N N N N -14.727 -10.307 24.938 12.197 -0.479 0.299 CAR ZMK 5
ZMK CAM CAM C 0 1 N N N N N N -16.035 -10.785 25.573 10.736 -0.834 0.017 CAM ZMK 6
ZMK CAL CAL C 0 1 N N N N N N -17.222 -10.550 24.657 9.842 0.350 0.395 CAL ZMK 7
ZMK CAN CAN C 0 1 N N N N N N -18.131 -9.491 25.259 8.380 -0.005 0.112 CAN ZMK 8
ZMK CAT CAT C 0 1 N N N N N N -19.268 -10.130 26.041 7.487 1.178 0.490 CAT ZMK 9
ZMK CBC CBC C 0 1 N N N N N N -20.426 -10.350 25.103 6.047 0.829 0.212 CBC ZMK 10
ZMK OAF OAF O 0 1 N N N N N N -20.700 -11.457 24.674 5.764 -0.259 -0.243 OAF ZMK 11
ZMK SAZ SAZ S 0 1 N N N N N N -21.388 -9.099 24.588 4.812 1.968 0.539 SAZ ZMK 12
ZMK CAQ CAQ C 0 1 N N N N N N -22.709 -9.994 23.842 3.362 1.016 0.023 CAQ ZMK 13
ZMK CAO CAO C 0 1 N N N N N N -22.444 -10.151 22.357 2.100 1.856 0.229 CAO ZMK 14
ZMK NAV NAV N 0 1 N N N N N N -23.505 -11.024 21.872 0.926 1.085 -0.189 NAV ZMK 15
ZMK CBA CBA C 0 1 N N N N N N -23.650 -11.404 20.605 -0.304 1.628 -0.096 CBA ZMK 16
ZMK OAD OAD O 0 1 N N N N N N -22.893 -11.050 19.721 -0.440 2.754 0.334 OAD ZMK 17
ZMK CAS CAS C 0 1 N N N N N N -24.797 -12.315 20.284 -1.512 0.835 -0.525 CAS ZMK 18
ZMK CAP CAP C 0 1 N N N N N N -25.603 -11.703 19.149 -2.773 1.675 -0.319 CAP ZMK 19
ZMK NAW NAW N 0 1 N N N N N N -25.863 -12.875 18.345 -3.947 0.904 -0.737 NAW ZMK 20
ZMK CBD CBD C 0 1 N N N N N N -27.008 -13.531 18.256 -5.177 1.446 -0.644 CBD ZMK 21
ZMK OAG OAG O 0 1 N N N N N N -28.020 -13.210 18.860 -5.323 2.536 -0.131 OAG ZMK 22
ZMK CBE CBE C 0 1 N N S N N N -26.961 -14.717 17.346 -6.372 0.699 -1.178 CBE ZMK 23
ZMK OAI OAI O 0 1 N N N N N N -25.601 -15.150 17.216 -5.932 -0.468 -1.874 OAI ZMK 24
ZMK CBF CBF C 0 1 N N N N N N -27.793 -15.864 17.897 -7.278 0.288 -0.015 CBF ZMK 25
ZMK CAC CAC C 0 1 N N N N N N -29.275 -15.515 17.863 -6.463 -0.500 1.012 CAC ZMK 26
ZMK CAB CAB C 0 1 N N N N N N -27.364 -16.202 19.321 -7.858 1.540 0.647 CAB ZMK 27
ZMK CAU CAU C 0 1 N N N N N N -27.533 -17.044 16.986 -8.418 -0.586 -0.541 CAU ZMK 28
ZMK OAY OAY O 0 1 N N N N N N -28.617 -17.930 17.160 -9.264 -0.969 0.545 OAY ZMK 29
ZMK PBG PBG P 0 1 N N N N N N -28.718 -19.256 16.277 -10.568 -1.895 0.357 PBG ZMK 30
ZMK OAJ OAJ O 0 1 N N N N N N -27.918 -18.948 15.037 -10.186 -3.154 -0.320 OAJ ZMK 31
ZMK OAK OAK O 0 1 N N N N N N -28.110 -20.306 17.169 -11.201 -2.231 1.798 OAK ZMK 32
ZMK OAH OAH O 0 1 N N N N N N -30.211 -19.387 16.073 -11.656 -1.114 -0.538 OAH ZMK 33
ZMK H1 H1 H 0 1 N N N N N N -13.834 -14.709 25.423 16.250 -2.514 -0.121 H1 ZMK 34
ZMK H2 H2 H 0 1 N N N N N N -12.718 -13.725 26.430 14.884 -3.578 0.292 H2 ZMK 35
ZMK H3 H3 H 0 1 N N N N N N -14.492 -13.622 26.693 15.037 -2.927 -1.357 H3 ZMK 36
ZMK H4 H4 H 0 1 N N N N N N -14.481 -9.297 25.297 12.318 -0.256 1.359 H4 ZMK 37
ZMK H5 H5 H 0 1 N N N N N N -14.823 -10.294 23.842 12.480 0.393 -0.290 H5 ZMK 38
ZMK H6 H6 H 0 1 N N N N N N -16.196 -10.237 26.513 10.614 -1.057 -1.043 H6 ZMK 39
ZMK H7 H7 H 0 1 N N N N N N -15.956 -11.861 25.785 10.453 -1.705 0.607 H7 ZMK 40
ZMK H8 H8 H 0 1 N N N N N N -17.783 -11.489 24.537 9.963 0.573 1.454 H8 ZMK 41
ZMK H9 H9 H 0 1 N N N N N N -16.864 -10.209 23.674 10.125 1.221 -0.195 H9 ZMK 42
ZMK H10 H10 H 0 1 N N N N N N -17.542 -8.854 25.936 8.259 -0.228 -0.947 H10 ZMK 43
ZMK H11 H11 H 0 1 N N N N N N -18.552 -8.876 24.450 8.097 -0.877 0.702 H11 ZMK 44
ZMK H12 H12 H 0 1 N N N N N N -19.575 -9.464 26.861 7.608 1.402 1.550 H12 ZMK 45
ZMK H13 H13 H 0 1 N N N N N N -18.938 -11.094 26.456 7.770 2.050 -0.100 H13 ZMK 46
ZMK H14 H14 H 0 1 N N N N N N -23.651 -9.446 23.990 3.455 0.754 -1.031 H14 ZMK 47
ZMK H15 H15 H 0 1 N N N N N N -22.786 -10.988 24.307 3.294 0.106 0.618 H15 ZMK 48
ZMK H16 H16 H 0 1 N N N N N N -21.459 -10.610 22.187 2.006 2.118 1.283 H16 ZMK 49
ZMK H17 H17 H 0 1 N N N N N N -22.486 -9.175 21.852 2.168 2.766 -0.367 H17 ZMK 50
ZMK H18 H18 H 0 1 N N N N N N -24.171 -11.361 22.538 1.034 0.185 -0.532 H18 ZMK 51
ZMK H19 H19 H 0 1 N N N N N N -25.437 -12.432 21.171 -1.418 0.573 -1.579 H19 ZMK 52
ZMK H20 H20 H 0 1 N N N N N N -24.413 -13.299 19.977 -1.579 -0.075 0.070 H20 ZMK 53
ZMK H21 H21 H 0 1 N N N N N N -25.019 -10.953 18.596 -2.867 1.937 0.735 H21 ZMK 54
ZMK H22 H22 H 0 1 N N N N N N -26.535 -11.246 19.514 -2.706 2.585 -0.915 H22 ZMK 55
ZMK H23 H23 H 0 1 N N N N N N -25.101 -13.225 17.801 -3.839 0.003 -1.080 H23 ZMK 56
ZMK H24 H24 H 0 1 N N N N N N -27.360 -14.431 16.362 -6.927 1.342 -1.861 H24 ZMK 57
ZMK H25 H25 H 0 1 N N N N N N -25.073 -14.439 16.872 -5.430 -1.087 -1.326 H25 ZMK 58
ZMK H26 H26 H 0 1 N N N N N N -29.466 -14.657 18.525 -5.651 0.123 1.387 H26 ZMK 59
ZMK H27 H27 H 0 1 N N N N N N -29.567 -15.256 16.835 -7.108 -0.793 1.841 H27 ZMK 60
ZMK H28 H28 H 0 1 N N N N N N -29.863 -16.379 18.205 -6.050 -1.392 0.541 H28 ZMK 61
ZMK H29 H29 H 0 1 N N N N N N -27.556 -15.340 19.977 -8.342 2.159 -0.109 H29 ZMK 62
ZMK H30 H30 H 0 1 N N N N N N -27.936 -17.070 19.680 -8.590 1.247 1.399 H30 ZMK 63
ZMK H31 H31 H 0 1 N N N N N N -26.290 -16.440 19.334 -7.056 2.105 1.121 H31 ZMK 64
ZMK H32 H32 H 0 1 N N N N N N -26.590 -17.538 17.263 -8.999 -0.024 -1.272 H32 ZMK 65
ZMK H33 H33 H 0 1 N N N N N N -27.478 -16.711 15.939 -8.005 -1.477 -1.012 H33 ZMK 66
ZMK H34 H34 H 0 1 N N N N N N -27.294 -20.611 16.789 -11.991 -2.786 1.761 H34 ZMK 67
ZMK H35 H35 H 0 1 N N N N N N -30.419 -19.249 15.156 -11.953 -0.277 -0.154 H35 ZMK 68
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ZMK OAJ PBG DOUB N N 1
ZMK OAH PBG SING N N 2
ZMK PBG OAY SING N N 3
ZMK PBG OAK SING N N 4
ZMK CAU OAY SING N N 5
ZMK CAU CBF SING N N 6
ZMK OAI CBE SING N N 7
ZMK CBE CBF SING N N 8
ZMK CBE CBD SING N N 9
ZMK CAC CBF SING N N 10
ZMK CBF CAB SING N N 11
ZMK CBD NAW SING N N 12
ZMK CBD OAG DOUB N N 13
ZMK NAW CAP SING N N 14
ZMK CAP CAS SING N N 15
ZMK OAD CBA DOUB N N 16
ZMK CAS CBA SING N N 17
ZMK CBA NAV SING N N 18
ZMK NAV CAO SING N N 19
ZMK CAO CAQ SING N N 20
ZMK CAQ SAZ SING N N 21
ZMK SAZ CBC SING N N 22
ZMK CAL CAN SING N N 23
ZMK CAL CAM SING N N 24
ZMK OAF CBC DOUB N N 25
ZMK CAR CBB SING N N 26
ZMK CAR CAM SING N N 27
ZMK OAX CBB SING N N 28
ZMK OAX CAA SING N N 29
ZMK CBC CAT SING N N 30
ZMK CAN CAT SING N N 31
ZMK CBB OAE DOUB N N 32
ZMK CAA H1 SING N N 33
ZMK CAA H2 SING N N 34
ZMK CAA H3 SING N N 35
ZMK CAR H4 SING N N 36
ZMK CAR H5 SING N N 37
ZMK CAM H6 SING N N 38
ZMK CAM H7 SING N N 39
ZMK CAL H8 SING N N 40
ZMK CAL H9 SING N N 41
ZMK CAN H10 SING N N 42
ZMK CAN H11 SING N N 43
ZMK CAT H12 SING N N 44
ZMK CAT H13 SING N N 45
ZMK CAQ H14 SING N N 46
ZMK CAQ H15 SING N N 47
ZMK CAO H16 SING N N 48
ZMK CAO H17 SING N N 49
ZMK NAV H18 SING N N 50
ZMK CAS H19 SING N N 51
ZMK CAS H20 SING N N 52
ZMK CAP H21 SING N N 53
ZMK CAP H22 SING N N 54
ZMK NAW H23 SING N N 55
ZMK CBE H24 SING N N 56
ZMK OAI H25 SING N N 57
ZMK CAC H26 SING N N 58
ZMK CAC H27 SING N N 59
ZMK CAC H28 SING N N 60
ZMK CAB H29 SING N N 61
ZMK CAB H30 SING N N 62
ZMK CAB H31 SING N N 63
ZMK CAU H32 SING N N 64
ZMK CAU H33 SING N N 65
ZMK OAK H34 SING N N 66
ZMK OAH H35 SING N N 67
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ZMK SMILES ACDLabs 12.01 O=C(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O)O)CCCCCC(=O)OC
ZMK InChI InChI 1.03 InChI=1S/C19H35N2O10PS/c1-19(2,13-31-32(27,28)29)17(25)18(26)21-10-9-14(22)20-11-12-33-16(24)8-6-4-5-7-15(23)30-3/h17,25H,4-13H2,1-3H3,(H,20,22)(H,21,26)(H2,27,28,29)/t17-/m1/s1
ZMK InChIKey InChI 1.03 HCFLUHFHCAMJNF-QGZVFWFLSA-N
ZMK SMILES_CANONICAL CACTVS 3.370 COC(=O)CCCCCC(=O)SCCNC(=O)CCNC(=O)[C@@H](O)C(C)(C)CO[P](O)(O)=O
ZMK SMILES CACTVS 3.370 COC(=O)CCCCCC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O
ZMK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CC(C)(COP(=O)(O)O)[C@@H](C(=O)NCCC(=O)NCCSC(=O)CCCCCC(=O)OC)O
ZMK SMILES "OpenEye OEToolkits" 1.7.6 CC(C)(COP(=O)(O)O)C(C(=O)NCCC(=O)NCCSC(=O)CCCCCC(=O)OC)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ZMK "SYSTEMATIC NAME" ACDLabs 12.01 "methyl 7-{[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}-7-oxoheptanoate"
ZMK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "methyl 7-[2-[3-[[(2S)-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethylsulfanyl]-7-oxidanylidene-heptanoate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ZMK 'Create component' 2012-05-01 RCSB
ZMK 'Modify name' 2012-10-04 RCSB
ZMK 'Modify formula' 2012-10-04 RCSB
ZMK 'Initial release' 2012-10-12 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ZMK OAE O 31.085 1.917 1
ZMK CBB C 31.085 0.417 2
ZMK OAX O 32.384 -0.333 3
ZMK CAA C 33.683 0.417 4
ZMK CAR C 29.786 -0.333 5
ZMK CAM C 28.487 0.417 6
ZMK CAL C 27.188 -0.333 7
ZMK CAN C 25.889 0.417 8
ZMK CAT C 24.590 -0.333 9
ZMK CBC C 23.291 0.417 10
ZMK OAF O 23.291 1.917 11
ZMK SAZ S 21.992 -0.333 12
ZMK CAQ C 20.693 0.417 13
ZMK CAO C 19.394 -0.333 14
ZMK NAV N 18.095 0.417 15
ZMK CBA C 16.796 -0.333 16
ZMK OAD O 16.796 -1.833 17
ZMK CAS C 15.497 0.417 18
ZMK CAP C 14.198 -0.333 19
ZMK NAW N 12.899 0.417 20
ZMK CBD C 11.600 -0.333 21
ZMK OAG O 11.600 -1.833 22
ZMK CBE C 10.301 0.417 23
ZMK OAI O 10.301 1.917 24
ZMK CBF C 9.002 -0.333 25
ZMK CAC C 8.252 0.966 26
ZMK CAB C 9.752 -1.632 27
ZMK CAU C 7.702 -1.083 28
ZMK OAY O 6.404 -0.333 29
ZMK PBG P 5.104 -1.083 30
ZMK OAJ O 3.805 -1.833 31
ZMK OAK O 5.854 -2.382 32
ZMK OAH O 4.354 0.216 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ZMK OAJ PBG DOUBLE NONE 1
ZMK OAH PBG SINGLE NONE 2
ZMK PBG OAY SINGLE NONE 3
ZMK PBG OAK SINGLE NONE 4
ZMK CAU OAY SINGLE NONE 5
ZMK CAU CBF SINGLE NONE 6
ZMK CBE OAI SINGLE BEGINDASH 7
ZMK CBE CBF SINGLE NONE 8
ZMK CBE CBD SINGLE NONE 9
ZMK CAC CBF SINGLE NONE 10
ZMK CBF CAB SINGLE NONE 11
ZMK CBD NAW SINGLE NONE 12
ZMK CBD OAG DOUBLE NONE 13
ZMK NAW CAP SINGLE NONE 14
ZMK CAP CAS SINGLE NONE 15
ZMK OAD CBA DOUBLE NONE 16
ZMK CAS CBA SINGLE NONE 17
ZMK CBA NAV SINGLE NONE 18
ZMK NAV CAO SINGLE NONE 19
ZMK CAO CAQ SINGLE NONE 20
ZMK CAQ SAZ SINGLE NONE 21
ZMK SAZ CBC SINGLE NONE 22
ZMK CAL CAN SINGLE NONE 23
ZMK CAL CAM SINGLE NONE 24
ZMK OAF CBC DOUBLE NONE 25
ZMK CAR CBB SINGLE NONE 26
ZMK CAR CAM SINGLE NONE 27
ZMK OAX CBB SINGLE NONE 28
ZMK OAX CAA SINGLE NONE 29
ZMK CBC CAT SINGLE NONE 30
ZMK CAN CAT SINGLE NONE 31
ZMK CBB OAE DOUBLE NONE 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ZMK amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
ZMK phosphate F2 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ZMK NAV F1 1
ZMK CBA F1 1
ZMK OAD F1 1
ZMK CAS F1 1
ZMK NAW F1 2
ZMK CBD F1 2
ZMK OAG F1 2
ZMK CBE F1 2
ZMK OAY F2 1
ZMK PBG F2 1
ZMK OAJ F2 1
ZMK OAH F2 1
ZMK OAK F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ZMK
_pdbe_chem_comp_rdkit_properties.exactmw 514.175
_pdbe_chem_comp_rdkit_properties.amw 514.534
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 12
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 23
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 11
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 68
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.789
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 246.887
_pdbe_chem_comp_rdkit_properties.tpsa 188.560
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.489
_pdbe_chem_comp_rdkit_properties.CrippenMR 120.986
_pdbe_chem_comp_rdkit_properties.chi0v 17.043
_pdbe_chem_comp_rdkit_properties.chi1v 9.443
_pdbe_chem_comp_rdkit_properties.chi2v 2.855
_pdbe_chem_comp_rdkit_properties.chi3v 2.855
_pdbe_chem_comp_rdkit_properties.chi4v 1.461
_pdbe_chem_comp_rdkit_properties.chi0n 50.332
_pdbe_chem_comp_rdkit_properties.chi1n 24.285
_pdbe_chem_comp_rdkit_properties.chi2n 2.059
_pdbe_chem_comp_rdkit_properties.chi3n 2.059
_pdbe_chem_comp_rdkit_properties.chi4n 0.926
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.500
_pdbe_chem_comp_rdkit_properties.kappa1 6.830
_pdbe_chem_comp_rdkit_properties.kappa2 16.182
_pdbe_chem_comp_rdkit_properties.kappa3 16.714
_pdbe_chem_comp_rdkit_properties.Phi 3.349
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ZMK UniChem PDBe ZMK
ZMK UniChem ZINC ZINC000098209668
ZMK UniChem PubChem 60210965
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ZMK OAE 4.258 -1.887 2.918 ETKDGv3 1
ZMK CBB 3.268 -1.260 2.451 ETKDGv3 2
ZMK OAX 2.579 -1.747 1.337 ETKDGv3 3
ZMK CAA 2.928 -2.972 0.703 ETKDGv3 4
ZMK CAR 2.852 0.036 3.077 ETKDGv3 5
ZMK CAM 3.582 1.230 2.445 ETKDGv3 6
ZMK CAL 3.020 1.639 1.071 ETKDGv3 7
ZMK CAN 1.683 2.390 1.187 ETKDGv3 8
ZMK CAT 1.257 2.971 -0.165 ETKDGv3 9
ZMK CBC -0.015 3.759 -0.033 ETKDGv3 10
ZMK OAF -0.051 4.752 0.676 ETKDGv3 11
ZMK SAZ -1.499 3.245 -0.903 ETKDGv3 12
ZMK CAQ -1.283 4.395 -2.311 ETKDGv3 13
ZMK CAO -0.170 3.955 -3.270 ETKDGv3 14
ZMK NAV -0.334 2.561 -3.679 ETKDGv3 15
ZMK CBA -1.419 2.118 -4.505 ETKDGv3 16
ZMK OAD -2.187 2.956 -5.051 ETKDGv3 17
ZMK CAS -1.682 0.652 -4.686 ETKDGv3 18
ZMK CAP -2.671 0.136 -3.634 ETKDGv3 19
ZMK NAW -2.070 0.102 -2.300 ETKDGv3 20
ZMK CBD -2.831 -0.282 -1.147 ETKDGv3 21
ZMK OAG -4.064 -0.523 -1.257 ETKDGv3 22
ZMK CBE -2.155 -0.425 0.199 ETKDGv3 23
ZMK OAI -3.049 -0.035 1.213 ETKDGv3 24
ZMK CBF -1.632 -1.877 0.469 ETKDGv3 25
ZMK CAC -0.580 -2.262 -0.597 ETKDGv3 26
ZMK CAB -2.792 -2.900 0.425 ETKDGv3 27
ZMK CAU -0.973 -1.923 1.875 ETKDGv3 28
ZMK OAY -0.387 -3.186 2.103 ETKDGv3 29
ZMK PBG -0.012 -3.340 3.761 ETKDGv3 30
ZMK OAJ -1.265 -3.700 4.529 ETKDGv3 31
ZMK OAK 1.126 -4.577 3.950 ETKDGv3 32
ZMK OAH 0.642 -1.905 4.381 ETKDGv3 33
ZMK H1 3.988 -2.942 0.373 ETKDGv3 34
ZMK H2 2.776 -3.818 1.406 ETKDGv3 35
ZMK H3 2.285 -3.122 -0.186 ETKDGv3 36
ZMK H4 3.098 0.002 4.161 ETKDGv3 37
ZMK H5 1.753 0.156 2.999 ETKDGv3 38
ZMK H6 4.662 0.984 2.335 ETKDGv3 39
ZMK H7 3.526 2.097 3.138 ETKDGv3 40
ZMK H8 2.900 0.748 0.419 ETKDGv3 41
ZMK H9 3.765 2.309 0.588 ETKDGv3 42
ZMK H10 0.890 1.700 1.546 ETKDGv3 43
ZMK H11 1.791 3.218 1.922 ETKDGv3 44
ZMK H12 2.051 3.643 -0.557 ETKDGv3 45
ZMK H13 1.112 2.142 -0.891 ETKDGv3 46
ZMK H14 -2.245 4.445 -2.861 ETKDGv3 47
ZMK H15 -1.067 5.417 -1.933 ETKDGv3 48
ZMK H16 -0.172 4.610 -4.168 ETKDGv3 49
ZMK H17 0.815 4.081 -2.775 ETKDGv3 50
ZMK H18 0.379 1.867 -3.362 ETKDGv3 51
ZMK H19 -0.731 0.080 -4.630 ETKDGv3 52
ZMK H20 -2.112 0.484 -5.697 ETKDGv3 53
ZMK H21 -3.575 0.784 -3.622 ETKDGv3 54
ZMK H22 -2.986 -0.893 -3.912 ETKDGv3 55
ZMK H23 -1.055 0.318 -2.176 ETKDGv3 56
ZMK H24 -1.276 0.262 0.220 ETKDGv3 57
ZMK H25 -3.114 0.955 1.176 ETKDGv3 58
ZMK H26 -1.026 -2.283 -1.614 ETKDGv3 59
ZMK H27 0.262 -1.537 -0.596 ETKDGv3 60
ZMK H28 -0.172 -3.278 -0.406 ETKDGv3 61
ZMK H29 -2.427 -3.920 0.673 ETKDGv3 62
ZMK H30 -3.585 -2.630 1.154 ETKDGv3 63
ZMK H31 -3.245 -2.949 -0.588 ETKDGv3 64
ZMK H32 -1.756 -1.698 2.638 ETKDGv3 65
ZMK H33 -0.186 -1.138 1.934 ETKDGv3 66
ZMK H34 0.745 -5.347 3.457 ETKDGv3 67
ZMK H35 -0.138 -1.337 4.604 ETKDGv3 68
#