data_ZOL
#
_chem_comp.id ZOL
_chem_comp.name "ZOLEDRONIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C5 H10 N2 O7 P2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "(1-HYDROXY-2-IMIDAZOL-1-YLETHYLIDENE)DIPHOSPHONIC ACID"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2005-06-06
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 272.090
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ZOL
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1ZW5
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ZOL O17 O17 O 0 1 N N N N N N 17.348 33.943 -8.860 -0.194 -2.838 0.649 O17 ZOL 1
ZOL P14 P14 P 0 1 N N N N N N 16.144 34.196 -9.661 -0.602 -1.581 -0.270 P14 ZOL 2
ZOL O16 O16 O 0 1 N N N N N N 16.021 33.019 -10.636 0.570 -1.292 -1.335 O16 ZOL 3
ZOL O15 O15 O 0 1 N N N N N N 16.043 35.546 -10.342 -1.859 -1.884 -0.990 O15 ZOL 4
ZOL C8 C8 C 0 1 N N N N N N 14.954 34.290 -8.276 -0.843 -0.112 0.782 C8 ZOL 5
ZOL P9 P9 P 0 1 N N N N N N 15.358 35.693 -7.182 -1.094 1.355 -0.271 P9 ZOL 6
ZOL O10 O10 O 0 1 N N N N N N 14.465 35.689 -5.968 -1.307 2.652 0.659 O10 ZOL 7
ZOL O11 O11 O 0 1 N N N N N N 16.834 35.612 -6.737 0.198 1.571 -1.206 O11 ZOL 8
ZOL O12 O12 O 0 1 N N N N N N 15.042 36.909 -7.943 -2.290 1.154 -1.119 O12 ZOL 9
ZOL O13 O13 O 0 1 N N N N N N 13.641 34.500 -8.787 -1.990 -0.304 1.613 O13 ZOL 10
ZOL C7 C7 C 0 1 N N N N N N 14.921 33.043 -7.335 0.393 0.095 1.660 C7 ZOL 11
ZOL N15 N15 N 0 1 Y N N N N N 14.591 31.764 -7.984 1.579 0.221 0.810 N15 ZOL 12
ZOL C16 C16 C 0 1 Y N N N N N 13.713 31.557 -8.978 2.373 -0.786 0.386 C16 ZOL 13
ZOL N17 N17 N 0 1 Y N N N N N 13.718 30.255 -9.293 3.325 -0.286 -0.353 N17 ZOL 14
ZOL C18 C18 C 0 1 Y N N N N N 14.570 29.633 -8.459 3.180 1.046 -0.420 C18 ZOL 15
ZOL C19 C19 C 0 1 Y N N N N N 15.124 30.585 -7.644 2.094 1.383 0.301 C19 ZOL 16
ZOL H17 H17 H 0 1 N N N N N N 17.424 34.672 -8.255 0.660 -2.626 1.050 H17 ZOL 17
ZOL H1 H1 H 0 1 N N N N N N 15.241 33.182 -11.154 0.665 -2.092 -1.870 H1 ZOL 18
ZOL H10 H10 H 0 1 N N N N N N 14.675 36.419 -5.398 -0.507 2.747 1.194 H10 ZOL 19
ZOL H11 H11 H 0 1 N N N N N N 17.044 36.342 -6.167 0.024 2.355 -1.745 H11 ZOL 20
ZOL H13 H13 H 0 1 N N N N N N 13.022 34.548 -8.067 -2.082 0.493 2.152 H13 ZOL 21
ZOL H71 1H7 H 0 1 N N N N N N 15.888 32.953 -6.787 0.271 1.003 2.251 H71 ZOL 22
ZOL H72 2H7 H 0 1 N N N N N N 14.226 33.227 -6.482 0.513 -0.759 2.326 H72 ZOL 23
ZOL H16 H16 H 0 1 N N N N N N 13.089 32.330 -9.457 2.238 -1.833 0.616 H16 ZOL 24
ZOL H18 H18 H 0 1 N N N N N N 14.775 28.549 -8.445 3.822 1.728 -0.958 H18 ZOL 25
ZOL H19 H19 H 0 1 N N N N N N 15.872 30.428 -6.848 1.704 2.379 0.449 H19 ZOL 26
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ZOL O17 P14 SING N N 1
ZOL O17 H17 SING N N 2
ZOL P14 O16 SING N N 3
ZOL P14 O15 DOUB N N 4
ZOL P14 C8 SING N N 5
ZOL O16 H1 SING N N 6
ZOL C8 P9 SING N N 7
ZOL C8 O13 SING N N 8
ZOL C8 C7 SING N N 9
ZOL P9 O10 SING N N 10
ZOL P9 O11 SING N N 11
ZOL P9 O12 DOUB N N 12
ZOL O10 H10 SING N N 13
ZOL O11 H11 SING N N 14
ZOL O13 H13 SING N N 15
ZOL C7 N15 SING N N 16
ZOL C7 H71 SING N N 17
ZOL C7 H72 SING N N 18
ZOL N15 C16 SING Y N 19
ZOL N15 C19 SING Y N 20
ZOL C16 N17 DOUB Y N 21
ZOL C16 H16 SING N N 22
ZOL N17 C18 SING Y N 23
ZOL C18 C19 DOUB Y N 24
ZOL C18 H18 SING N N 25
ZOL C19 H19 SING N N 26
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ZOL SMILES ACDLabs 10.04 O=P(O)(O)C(O)(Cn1ccnc1)P(=O)(O)O
ZOL SMILES_CANONICAL CACTVS 3.341 OC(Cn1ccnc1)([P](O)(O)=O)[P](O)(O)=O
ZOL SMILES CACTVS 3.341 OC(Cn1ccnc1)([P](O)(O)=O)[P](O)(O)=O
ZOL SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1cn(cn1)CC(O)(P(=O)(O)O)P(=O)(O)O
ZOL SMILES "OpenEye OEToolkits" 1.5.0 c1cn(cn1)CC(O)(P(=O)(O)O)P(=O)(O)O
ZOL InChI InChI 1.03 InChI=1S/C5H10N2O7P2/c8-5(15(9,10)11,16(12,13)14)3-7-2-1-6-4-7/h1-2,4,8H,3H2,(H2,9,10,11)(H2,12,13,14)
ZOL InChIKey InChI 1.03 XRASPMIURGNCCH-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ZOL "SYSTEMATIC NAME" ACDLabs 10.04 "[1-hydroxy-2-(1H-imidazol-1-yl)ethane-1,1-diyl]bis(phosphonic acid)"
ZOL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(1-hydroxy-2-imidazol-1-yl-1-phosphono-ethyl)phosphonic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ZOL 'Create component' 2005-06-06 RCSB
ZOL 'Modify descriptor' 2011-06-04 RCSB
ZOL 'Modify synonyms' 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id ZOL
_pdbx_chem_comp_synonyms.name "(1-HYDROXY-2-IMIDAZOL-1-YLETHYLIDENE)DIPHOSPHONIC ACID"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id ZOL
_pdbe_chem_comp_drugbank_details.drugbank_id DB00399
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'Zoledronic acid'
_pdbe_chem_comp_drugbank_details.description
"Zoledronic acid, or CGP 42'446,[A203120] is a third generation, nitrogen containing bisphosphonate similar to [ibandronic acid], [minodronic acid], and [risedronic acid].[A203111] Zoledronic acid is used to treat and prevent multiple forms of osteoporosis, hypercalcemia of malignancy, multiple myeloma, bone metastases from solid tumors, and Paget’s disease of bone.[L13712,L13715,L13721] Zoledronic acid was first described in the literature in 1994.[A203120]  Zoledronic acid was granted FDA approval on 20 August 2001.[L13712]"
_pdbe_chem_comp_drugbank_details.cas_number 118072-93-8
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'Bisphosphonates are taken into the bone where they bind to hydroxyapatite. Bone resorption by osteoclasts causes local acidification, releasing the bisphosphonate, which is taken into the osteoclast by fluid-phase endocytosis.[A959] Endocytic vesicles become acidified, releasing bisphosphonates into the cytosol of osteoclasts where they act.[A959]  Osteoclasts mediate resorption of bone.[A6366] When osteoclasts bind to bone they form podosomes, ring structures of F-actin.[A6366] Etidronic acid also inhibits V-ATPases in the osteoclast, though the exact subunits are unknown, preventing F-actin from forming podosomes.[A202229,A202247,A203360] Disruption of the podosomes causes osteoclasts to detach from bones, preventing bone resorption.[A6366]  Nitrogen containing bisphosphonates such as zoledronate are known to induce apoptosis of hematopoietic tumor cells by inhibiting the components of the mevalonate pathway farnesyl diphosphate synthase, farnesyl diphosphate, and geranylgeranyl diphosphate.[A202769,A203123] These components are essential for post-translational prenylation of GTP-binding proteins like Rap1.[A202769,A203123] The lack of prenylation of these proteins interferes with their function, and in the case of Rap1, leads to apoptosis.[A202769,A203123] zoledronate also activated caspases which further contribute to apoptosis.[A202769,A203123]'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
ZOL CGP-42446 ChEMBL 'Research Code'
ZOL Reclast ChEMBL Tradename
ZOL Zometa ChEMBL Tradename
ZOL '(1-HYDROXY-2-IMIDAZOL-1-YLETHYLIDENE)DIPHOSPHONIC ACID' wwPDB ?
ZOL '(1-hydroxy-2-(1H-imidazol-1-yl)ethylidene)bisphosphonic acid' DrugBank ?
ZOL '(1-hydroxy-2-imidazol-1-ylethylidene)diphosphonic acid' DrugBank ?
ZOL 'Anhydrous Zoledronic Acid' DrugBank ?
ZOL 'Nanoparticles containing Zoledronic acid' DrugBank ?
ZOL Zol DrugBank ?
ZOL Zoledronate DrugBank ?
ZOL 'Zoledronic acid' DrugBank ?
ZOL 'Zoledronic Acid Anhydrous' DrugBank ?
ZOL 'Zoledronic Acid, Anhydrous' DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id ZOL
_pdbe_chem_comp_drugbank_classification.drugbank_id DB00399
_pdbe_chem_comp_drugbank_classification.parent Bisphosphonates
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organic phosphonic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as bisphosphonates. These are organic compounds containing two phosphonate groups linked together through a carbon atoms.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
ZOL DB00399 'Geranylgeranyl pyrophosphate synthase' Humans O95749 yes 1
ZOL DB00399 'Farnesyl pyrophosphate synthase' Humans P14324 yes 2
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ZOL O17 O 3.381 -2.425 1
ZOL P14 P 4.680 -1.675 2
ZOL O16 O 3.930 -0.376 3
ZOL O15 O 4.419 -3.152 4
ZOL C8 C 5.979 -0.925 5
ZOL P9 P 6.729 -2.224 6
ZOL O10 O 7.479 -3.523 7
ZOL O11 O 8.028 -1.474 8
ZOL O12 O 6.216 -3.633 9
ZOL O13 O 5.229 0.374 10
ZOL C7 C 7.278 -0.175 11
ZOL N15 N 7.278 1.325 12
ZOL C16 C 6.064 2.207 13
ZOL N17 N 6.528 3.633 14
ZOL C18 C 8.028 3.633 15
ZOL C19 C 8.492 2.207 16
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ZOL O17 P14 SINGLE NONE 1
ZOL P14 O16 SINGLE NONE 2
ZOL P14 O15 DOUBLE NONE 3
ZOL P14 C8 SINGLE NONE 4
ZOL C8 P9 SINGLE NONE 5
ZOL C8 O13 SINGLE NONE 6
ZOL C8 C7 SINGLE NONE 7
ZOL P9 O10 SINGLE NONE 8
ZOL P9 O11 SINGLE NONE 9
ZOL P9 O12 DOUBLE NONE 10
ZOL C7 N15 SINGLE NONE 11
ZOL N15 C16 SINGLE NONE 12
ZOL N15 C19 SINGLE NONE 13
ZOL C16 N17 DOUBLE NONE 14
ZOL N17 C18 SINGLE NONE 15
ZOL C18 C19 DOUBLE NONE 16
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ZOL MurckoScaffold S1 scaffold 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
ZOL imidazole F1 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ZOL N15 S1 1
ZOL C16 S1 1
ZOL N17 S1 1
ZOL C18 S1 1
ZOL C19 S1 1
ZOL C18 F1 1
ZOL C19 F1 1
ZOL N15 F1 1
ZOL C16 F1 1
ZOL N17 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ZOL
_pdbe_chem_comp_rdkit_properties.exactmw 271.996
_pdbe_chem_comp_rdkit_properties.amw 272.090
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 16
_pdbe_chem_comp_rdkit_properties.NumAtoms 26
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.400
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 104.180
_pdbe_chem_comp_rdkit_properties.tpsa 153.110
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.115
_pdbe_chem_comp_rdkit_properties.CrippenMR 51.265
_pdbe_chem_comp_rdkit_properties.chi0v 8.935
_pdbe_chem_comp_rdkit_properties.chi1v 6.450
_pdbe_chem_comp_rdkit_properties.chi2v 4.522
_pdbe_chem_comp_rdkit_properties.chi3v 4.522
_pdbe_chem_comp_rdkit_properties.chi4v 2.291
_pdbe_chem_comp_rdkit_properties.chi0n 17.147
_pdbe_chem_comp_rdkit_properties.chi1n 7.906
_pdbe_chem_comp_rdkit_properties.chi2n 1.368
_pdbe_chem_comp_rdkit_properties.chi3n 1.368
_pdbe_chem_comp_rdkit_properties.chi4n 0.646
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.530
_pdbe_chem_comp_rdkit_properties.kappa1 4.993
_pdbe_chem_comp_rdkit_properties.kappa2 4.047
_pdbe_chem_comp_rdkit_properties.kappa3 2.412
_pdbe_chem_comp_rdkit_properties.Phi 1.263
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ZOL UniChem ChEMBL CHEMBL924
ZOL UniChem DrugBank DB00399
ZOL UniChem PDBe ZOL
ZOL UniChem 'Guide to Pharmacology' 3177
ZOL UniChem ChEBI 46557
ZOL UniChem ZINC ZINC000003803652
ZOL UniChem PharmGKB PA10235
ZOL UniChem Selleck Zoledronic-Acid
ZOL UniChem BRENDA 189166
ZOL UniChem BRENDA 6184
ZOL UniChem DailyMed 'ZOLEDRONIC ACID'
ZOL UniChem ClinicalTrials 'ZOLEDRONIC ACID'
ZOL UniChem ClinicalTrials ZOMETA
ZOL UniChem rxnorm RECLAST
ZOL UniChem rxnorm 'ZOLEDRONIC ACID'
ZOL UniChem MedChemExpress HY-13777
ZOL UniChem eMolecules 902698
ZOL UniChem fdasrs 70HZ18PH24
ZOL UniChem SureChEMBL SCHEMBL19054
ZOL UniChem HMDB HMDB0014543
ZOL UniChem 'PubChem TPHARMA' 14824151
ZOL UniChem PubChem 68740
ZOL UniChem Mcule MCULE-1604726355
ZOL UniChem ACTor 118072-93-8
ZOL UniChem Nikkaji J556.181G
ZOL UniChem BindingDb 12578
ZOL UniChem 'EPA CompTox Dashboard' DTXSID0042668
ZOL UniChem DrugCentral 2868
ZOL UniChem ChemicalBook CB4395643
ZOL UniChem ClinicalTrials ACLASTA
ZOL UniChem ClinicalTrials AK-156
ZOL UniChem ClinicalTrials 'CGP 42446'
ZOL UniChem ClinicalTrials 'CGP 42446A'
ZOL UniChem ClinicalTrials CGP-42446
ZOL UniChem ClinicalTrials 'ZOLEDRONIC ACID HYDRATE'
ZOL UniChem ClinicalTrials CGP-42446A
ZOL UniChem ClinicalTrials RECLAST
ZOL UniChem ClinicalTrials 'ZOLEDRONIC ACID MONOHYDRATE'
ZOL UniChem rxnorm 'ZOLEDRONIC ACID ANHYDROUS'
ZOL UniChem rxnorm ZOMETA
ZOL UniChem 'Probes And Drugs' PD004076
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ZOL O17 -0.188 -2.213 1.214 ETKDGv3 1
ZOL P14 -1.319 -0.968 1.021 ETKDGv3 2
ZOL O16 -1.327 -0.007 2.414 ETKDGv3 3
ZOL O15 -2.690 -1.579 0.830 ETKDGv3 4
ZOL C8 -0.887 0.059 -0.433 ETKDGv3 5
ZOL P9 -2.233 1.276 -0.718 ETKDGv3 6
ZOL O10 -2.502 2.199 0.676 ETKDGv3 7
ZOL O11 -1.827 2.296 -2.008 ETKDGv3 8
ZOL O12 -3.506 0.540 -1.069 ETKDGv3 9
ZOL O13 -0.781 -0.785 -1.552 ETKDGv3 10
ZOL C7 0.446 0.803 -0.187 ETKDGv3 11
ZOL N15 1.560 -0.125 -0.008 ETKDGv3 12
ZOL C16 2.334 -0.335 1.166 ETKDGv3 13
ZOL N17 3.359 -1.097 0.955 ETKDGv3 14
ZOL C18 3.308 -1.424 -0.435 ETKDGv3 15
ZOL C19 2.263 -0.848 -1.004 ETKDGv3 16
ZOL H17 -0.234 -2.733 0.372 ETKDGv3 17
ZOL H1 -1.469 -0.644 3.160 ETKDGv3 18
ZOL H10 -1.702 2.774 0.766 ETKDGv3 19
ZOL H11 -1.205 2.964 -1.624 ETKDGv3 20
ZOL H13 -0.567 -0.218 -2.339 ETKDGv3 21
ZOL H71 0.677 1.468 -1.047 ETKDGv3 22
ZOL H72 0.358 1.449 0.713 ETKDGv3 23
ZOL H16 2.100 0.090 2.133 ETKDGv3 24
ZOL H18 4.037 -2.040 -0.945 ETKDGv3 25
ZOL H19 1.994 -0.902 -2.050 ETKDGv3 26
#