data_ZYQ
#
_chem_comp.id ZYQ
_chem_comp.name N-(4-OXO-5,6,7,8-TETRAHYDRO-4H-[1,3]THIAZOLO[5,4-C]AZEPIN-2-YL)ACETAMIDE
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C9 H11 N3 O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2009-07-03
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 225.268
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ZYQ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2WMQ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ZYQ CAA CAA C 0 1 N N N N N N 17.947 -3.226 8.067 4.997 -0.430 0.209 CAA ZYQ 1
ZYQ CAK CAK C 0 1 N N N N N N 16.647 -2.542 7.726 3.546 -0.030 0.152 CAK ZYQ 2
ZYQ OAB OAB O 0 1 N N N N N N 16.589 -1.700 6.838 3.222 1.115 0.387 OAB ZYQ 3
ZYQ NAI NAI N 0 1 N N N N N N 15.608 -2.943 8.438 2.606 -0.944 -0.161 NAI ZYQ 4
ZYQ CAN CAN C 0 1 Y N N N N N 14.443 -2.393 8.186 1.273 -0.577 -0.213 CAN ZYQ 5
ZYQ NAG NAG N 0 1 Y N N N N N 13.257 -2.805 8.594 0.293 -1.380 -0.504 NAG ZYQ 6
ZYQ CAM CAM C 0 1 Y N N N N N 12.244 -2.041 8.161 -0.928 -0.888 -0.516 CAM ZYQ 7
ZYQ CAF CAF C 0 1 N N N N N N 10.761 -2.234 8.431 -2.188 -1.676 -0.807 CAF ZYQ 8
ZYQ CAD CAD C 0 1 N N N N N N 10.151 -0.996 9.076 -3.005 -1.844 0.476 CAD ZYQ 9
ZYQ CAE CAE C 0 1 N N N N N N 9.740 0.144 8.146 -3.013 -0.531 1.260 CAE ZYQ 10
ZYQ NAH NAH N 0 1 N N N N N N 10.698 0.581 7.127 -3.248 0.639 0.430 NAH ZYQ 11
ZYQ CAL CAL C 0 1 N N N N N N 11.876 0.076 6.755 -2.198 1.233 -0.189 CAL ZYQ 12
ZYQ OAC OAC O 0 1 N N N N N N 12.409 0.678 5.829 -2.282 2.339 -0.690 OAC ZYQ 13
ZYQ CAO CAO C 0 1 Y N N N N N 12.672 -1.000 7.401 -0.951 0.451 -0.216 CAO ZYQ 14
ZYQ SAJ SAJ S 0 1 Y N N N N N 14.280 -1.084 7.279 0.682 0.997 0.103 SAJ ZYQ 15
ZYQ HAA1 HAA1 H 0 0 N N N N N N 18.527 -3.393 7.147 5.603 0.437 0.475 HAA1 ZYQ 16
ZYQ HAA2 HAA2 H 0 0 N N N N N N 18.525 -2.592 8.755 5.130 -1.210 0.958 HAA2 ZYQ 17
ZYQ HAA3 HAA3 H 0 0 N N N N N N 17.737 -4.193 8.548 5.309 -0.805 -0.766 HAA3 ZYQ 18
ZYQ HAI HAI H 0 1 N N N N N N 15.706 -3.643 9.146 2.865 -1.860 -0.350 HAI ZYQ 19
ZYQ HAF1 HAF1 H 0 0 N N N N N N 10.248 -2.428 7.477 -2.783 -1.145 -1.550 HAF1 ZYQ 20
ZYQ HAF2 HAF2 H 0 0 N N N N N N 10.640 -3.082 9.121 -1.918 -2.658 -1.196 HAF2 ZYQ 21
ZYQ HAD1 HAD1 H 0 0 N N N N N N 9.243 -1.323 9.604 -4.029 -2.119 0.221 HAD1 ZYQ 22
ZYQ HAD2 HAD2 H 0 0 N N N N N N 10.947 -0.579 9.710 -2.562 -2.629 1.089 HAD2 ZYQ 23
ZYQ HAE1 HAE1 H 0 0 N N N N N N 8.840 -0.193 7.610 -3.793 -0.582 2.020 HAE1 ZYQ 24
ZYQ HAE2 HAE2 H 0 0 N N N N N N 9.619 1.015 8.807 -2.051 -0.417 1.760 HAE2 ZYQ 25
ZYQ HAH HAH H 0 1 N N N N N N 10.421 1.399 6.623 -4.145 0.990 0.320 HAH ZYQ 26
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ZYQ CAA CAK SING N N 1
ZYQ CAK OAB DOUB N N 2
ZYQ CAK NAI SING N N 3
ZYQ NAI CAN SING N N 4
ZYQ CAN NAG DOUB Y N 5
ZYQ CAN SAJ SING Y N 6
ZYQ NAG CAM SING Y N 7
ZYQ CAM CAF SING N N 8
ZYQ CAM CAO DOUB Y N 9
ZYQ CAF CAD SING N N 10
ZYQ CAD CAE SING N N 11
ZYQ CAE NAH SING N N 12
ZYQ NAH CAL SING N N 13
ZYQ CAL OAC DOUB N N 14
ZYQ CAL CAO SING N N 15
ZYQ CAO SAJ SING Y N 16
ZYQ CAA HAA1 SING N N 17
ZYQ CAA HAA2 SING N N 18
ZYQ CAA HAA3 SING N N 19
ZYQ NAI HAI SING N N 20
ZYQ CAF HAF1 SING N N 21
ZYQ CAF HAF2 SING N N 22
ZYQ CAD HAD1 SING N N 23
ZYQ CAD HAD2 SING N N 24
ZYQ CAE HAE1 SING N N 25
ZYQ CAE HAE2 SING N N 26
ZYQ NAH HAH SING N N 27
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ZYQ SMILES ACDLabs 10.04 O=C1NCCCc2nc(sc12)NC(=O)C
ZYQ SMILES_CANONICAL CACTVS 3.352 CC(=O)Nc1sc2C(=O)NCCCc2n1
ZYQ SMILES CACTVS 3.352 CC(=O)Nc1sc2C(=O)NCCCc2n1
ZYQ SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 CC(=O)Nc1nc2c(s1)C(=O)NCCC2
ZYQ SMILES "OpenEye OEToolkits" 1.6.1 CC(=O)Nc1nc2c(s1)C(=O)NCCC2
ZYQ InChI InChI 1.03 InChI=1S/C9H11N3O2S/c1-5(13)11-9-12-6-3-2-4-10-8(14)7(6)15-9/h2-4H2,1H3,(H,10,14)(H,11,12,13)
ZYQ InChIKey InChI 1.03 OYHOEDBNAJPFKK-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ZYQ "SYSTEMATIC NAME" ACDLabs 10.04 N-(4-oxo-5,6,7,8-tetrahydro-4H-[1,3]thiazolo[5,4-c]azepin-2-yl)acetamide
ZYQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 N-(4-oxo-5,6,7,8-tetrahydro-[1,3]thiazolo[5,4-c]azepin-2-yl)ethanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ZYQ 'Create component' 2009-07-03 EBI
ZYQ 'Modify aromatic_flag' 2011-06-04 RCSB
ZYQ 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id ZYQ
_pdbe_chem_comp_drugbank_details.drugbank_id DB08776
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'N-(4-OXO-5,6,7,8-TETRAHYDRO-4H-[1,3]THIAZOLO[5,4-C]AZEPIN-2-YL)ACETAMIDE'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id ZYQ
_pdbe_chem_comp_drugbank_classification.drugbank_id DB08776
_pdbe_chem_comp_drugbank_classification.parent N-acetylarylamines
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organonitrogen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic nitrogen compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as n-acetylarylamines. These are acetamides where one or more amide hydrogens is substituted by an aryl group.'
#
_pdbe_chem_comp_drugbank_targets.comp_id ZYQ
_pdbe_chem_comp_drugbank_targets.drugbank_id DB08776
_pdbe_chem_comp_drugbank_targets.name 'Serine/threonine-protein kinase Chk1'
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id O14757
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ZYQ CAA C 10.094 2.861 1
ZYQ CAK C 10.837 1.558 2
ZYQ OAB O 12.337 1.551 3
ZYQ NAI N 10.081 0.263 4
ZYQ CAN C 8.581 0.271 5
ZYQ NAG N 7.711 1.482 6
ZYQ CAM C 6.290 1.032 7
ZYQ CAF C 5.122 1.973 8
ZYQ CAD C 3.658 1.647 9
ZYQ CAE C 3.000 0.298 10
ZYQ NAH N 3.644 -1.056 11
ZYQ CAL C 5.105 -1.397 12
ZYQ OAC O 5.431 -2.861 13
ZYQ CAO C 6.282 -0.468 14
ZYQ SAJ S 7.699 -0.932 15
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ZYQ CAA CAK SINGLE NONE 1
ZYQ CAK OAB DOUBLE NONE 2
ZYQ CAK NAI SINGLE NONE 3
ZYQ NAI CAN SINGLE NONE 4
ZYQ CAN NAG DOUBLE NONE 5
ZYQ CAN SAJ SINGLE NONE 6
ZYQ NAG CAM SINGLE NONE 7
ZYQ CAM CAF SINGLE NONE 8
ZYQ CAM CAO DOUBLE NONE 9
ZYQ CAF CAD SINGLE NONE 10
ZYQ CAD CAE SINGLE NONE 11
ZYQ CAE NAH SINGLE NONE 12
ZYQ NAH CAL SINGLE NONE 13
ZYQ CAL OAC DOUBLE NONE 14
ZYQ CAL CAO SINGLE NONE 15
ZYQ CAO SAJ SINGLE NONE 16
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ZYQ MurckoScaffold S1 scaffold O=C1NCCCc2ncsc21 InChI=1S/C7H8N2OS/c10-7-6-5(9-4-11-6)2-1-3-8-7/h4H,1-3H2,(H,8,10) ZTNXJGYKODNHIW-UHFFFAOYSA-N
ZYQ amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
ZYQ thiazole F2 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ZYQ CAN S1 1
ZYQ NAG S1 1
ZYQ CAM S1 1
ZYQ CAF S1 1
ZYQ CAD S1 1
ZYQ CAE S1 1
ZYQ NAH S1 1
ZYQ CAL S1 1
ZYQ OAC S1 1
ZYQ CAO S1 1
ZYQ SAJ S1 1
ZYQ NAI F1 1
ZYQ CAK F1 1
ZYQ OAB F1 1
ZYQ CAA F1 1
ZYQ NAH F1 2
ZYQ CAL F1 2
ZYQ OAC F1 2
ZYQ CAO F1 2
ZYQ CAO F2 1
ZYQ CAM F2 1
ZYQ NAG F2 1
ZYQ CAN F2 1
ZYQ SAJ F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ZYQ
_pdbe_chem_comp_rdkit_properties.exactmw 225.057
_pdbe_chem_comp_rdkit_properties.amw 225.273
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 2
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 15
_pdbe_chem_comp_rdkit_properties.NumAtoms 26
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.444
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 106.469
_pdbe_chem_comp_rdkit_properties.tpsa 71.090
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.287
_pdbe_chem_comp_rdkit_properties.CrippenMR 55.716
_pdbe_chem_comp_rdkit_properties.chi0v 7.883
_pdbe_chem_comp_rdkit_properties.chi1v 4.475
_pdbe_chem_comp_rdkit_properties.chi2v 2.339
_pdbe_chem_comp_rdkit_properties.chi3v 2.339
_pdbe_chem_comp_rdkit_properties.chi4v 1.664
_pdbe_chem_comp_rdkit_properties.chi0n 18.066
_pdbe_chem_comp_rdkit_properties.chi1n 9.053
_pdbe_chem_comp_rdkit_properties.chi2n 1.402
_pdbe_chem_comp_rdkit_properties.chi3n 1.402
_pdbe_chem_comp_rdkit_properties.chi4n 0.890
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.430
_pdbe_chem_comp_rdkit_properties.kappa1 3.279
_pdbe_chem_comp_rdkit_properties.kappa2 3.977
_pdbe_chem_comp_rdkit_properties.kappa3 2.148
_pdbe_chem_comp_rdkit_properties.Phi 0.869
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ZYQ UniChem ChEMBL CHEMBL562743
ZYQ UniChem DrugBank DB08776
ZYQ UniChem PDBe ZYQ
ZYQ UniChem ZINC ZINC000008994842
ZYQ UniChem eMolecules 1294805
ZYQ UniChem BindingDb 33206
ZYQ UniChem 'Probes And Drugs' PD004542
ZYQ UniChem SureChEMBL SCHEMBL3587356
ZYQ UniChem 'PubChem TPHARMA' 49853341
ZYQ UniChem PubChem 739358
ZYQ UniChem Mcule MCULE-1186119423
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ZYQ CAA 5.423 0.379 -0.420 ETKDGv3 1
ZYQ CAK 4.068 0.036 0.107 ETKDGv3 2
ZYQ OAB 3.973 -0.652 1.158 ETKDGv3 3
ZYQ NAI 2.898 0.455 -0.612 ETKDGv3 4
ZYQ CAN 1.547 0.230 -0.182 ETKDGv3 5
ZYQ NAG 0.533 0.593 -0.898 ETKDGv3 6
ZYQ CAM -0.741 0.295 -0.297 ETKDGv3 7
ZYQ CAF -1.988 0.802 -0.963 ETKDGv3 8
ZYQ CAD -3.140 -0.201 -0.962 ETKDGv3 9
ZYQ CAE -3.829 -0.247 0.397 ETKDGv3 10
ZYQ NAH -3.080 -1.066 1.340 ETKDGv3 11
ZYQ CAL -1.761 -0.756 1.804 ETKDGv3 12
ZYQ OAC -1.477 -1.010 3.005 ETKDGv3 13
ZYQ CAO -0.673 -0.293 0.914 ETKDGv3 14
ZYQ SAJ 1.044 -0.513 1.351 ETKDGv3 15
ZYQ HAA1 5.640 -0.242 -1.314 ETKDGv3 16
ZYQ HAA2 5.455 1.452 -0.705 ETKDGv3 17
ZYQ HAA3 6.201 0.192 0.350 ETKDGv3 18
ZYQ HAI 3.037 0.961 -1.516 ETKDGv3 19
ZYQ HAF1 -1.744 1.033 -2.023 ETKDGv3 20
ZYQ HAF2 -2.294 1.761 -0.491 ETKDGv3 21
ZYQ HAD1 -2.786 -1.213 -1.261 ETKDGv3 22
ZYQ HAD2 -3.886 0.129 -1.717 ETKDGv3 23
ZYQ HAE1 -3.969 0.774 0.815 ETKDGv3 24
ZYQ HAE2 -4.842 -0.688 0.265 ETKDGv3 25
ZYQ HAH -3.610 -1.805 1.854 ETKDGv3 26
#