data_ZZB
#
_chem_comp.id ZZB
_chem_comp.name
"[(1S,3S,5R,6R,8R)-6-(6-AMINOPURIN-9-YL)-4'-ETHYLAMINO-3'-FLUORO-SPIRO[2,4,7-TRIOXA-3-BORANUIDABICYCLO[3.3.0]OCTANE-3,7'-8-OXA-7-BORANUIDABICYCLO[4.3.0]NONA-1,3,5-TRIENE]-8-YL]METHYL DIHYDROGEN PHOSPHATE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H22 B F N6 O8 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge -1
_chem_comp.pdbx_initial_date 2009-04-06
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 523.197
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ZZB
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2WFG
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ZZB CB CB C 0 1 N N N N N N 16.529 0.393 10.071 -2.830 -1.232 -3.105 CB ZZB 1
ZZB CG CG C 0 1 Y N N N N N 17.360 -0.600 9.711 -3.719 -1.235 -1.884 CG ZZB 2
ZZB CD1 CD1 C 0 1 Y N N N N N 17.688 -1.115 8.458 -5.038 -1.571 -1.672 CD1 ZZB 3
ZZB CD2 CD2 C 0 1 Y N N N N N 17.958 -1.137 10.847 -2.933 -0.791 -0.827 CD2 ZZB 4
ZZB CE1 CE1 C 0 1 Y N N N N N 18.605 -2.158 8.342 -5.583 -1.467 -0.404 CE1 ZZB 5
ZZB CE2 CE2 C 0 1 Y N N N N N 18.874 -2.187 10.751 -3.467 -0.687 0.437 CE2 ZZB 6
ZZB CZ CZ C 0 1 Y N N N N N 19.204 -2.701 9.491 -4.798 -1.025 0.655 CZ ZZB 7
ZZB P P P 0 1 N N N N N N 21.234 -2.268 17.625 4.545 -3.772 0.639 P ZZB 8
ZZB O1P O1P O 0 1 N N N N N N 21.157 -3.752 18.258 3.940 -5.227 0.309 O1P ZZB 9
ZZB O2P O2P O 0 1 N N N N N N 22.395 -2.318 16.472 5.276 -3.807 2.073 O2P ZZB 10
ZZB O3P O3P O 0 1 N N N N N N 21.445 -1.185 18.626 5.525 -3.398 -0.405 O3P ZZB 11
ZZB N9 N9 N 0 1 Y N N N N N 15.949 -1.184 16.491 1.784 2.282 -0.029 N9 ZZB 12
ZZB C8 C8 C 0 1 Y N N N N N 15.848 0.017 17.055 3.048 2.542 -0.471 C8 ZZB 13
ZZB N7 N7 N 0 1 Y N N N N N 15.167 -0.084 18.188 3.263 3.825 -0.473 N7 ZZB 14
ZZB C5 C5 C 0 1 Y N N N N N 14.848 -1.364 18.353 2.155 4.469 -0.034 C5 ZZB 15
ZZB C6 C6 C 0 1 Y N N N N N 14.150 -2.042 19.343 1.810 5.816 0.170 C6 ZZB 16
ZZB N6 N6 N 0 1 N N N N N N 13.650 -1.380 20.392 2.716 6.827 -0.098 N6 ZZB 17
ZZB N1 N1 N 0 1 Y N N N N N 13.985 -3.364 19.224 0.594 6.096 0.627 N1 ZZB 18
ZZB C2 C2 C 0 1 Y N N N N N 14.484 -4.021 18.185 -0.277 5.138 0.885 C2 ZZB 19
ZZB N3 N3 N 0 1 Y N N N N N 15.159 -3.401 17.223 0.002 3.863 0.709 N3 ZZB 20
ZZB C4 C4 C 0 1 Y N N N N N 15.356 -2.075 17.277 1.193 3.487 0.256 C4 ZZB 21
ZZB "O5'" "O5'" O 0 1 N N N N N N 19.874 -2.045 16.807 3.353 -2.690 0.670 "O5'" ZZB 22
ZZB "C5'" "C5'" C 0 1 N N N N N N 19.673 -0.874 15.985 2.582 -2.349 -0.483 "C5'" ZZB 23
ZZB "C4'" "C4'" C 0 1 N N R N N N 18.780 -1.280 14.818 1.539 -1.294 -0.106 "C4'" ZZB 24
ZZB "O4'" "O4'" O 0 1 N N N N N N 17.734 -2.236 15.259 2.187 -0.055 0.252 "O4'" ZZB 25
ZZB "C3'" "C3'" C 0 1 N N S N N N 18.024 -0.076 14.232 0.660 -0.947 -1.326 "C3'" ZZB 26
ZZB "O3'" "O3'" O 0 1 N N N N N N 18.405 0.188 12.889 -0.653 -1.515 -1.124 "O3'" ZZB 27
ZZB "C2'" "C2'" C 0 1 N N R N N N 16.585 -0.566 14.126 0.410 0.583 -1.181 "C2'" ZZB 28
ZZB "O2'" "O2'" O 0 1 N N N N N N 16.596 -1.249 12.875 -1.009 0.659 -0.919 "O2'" ZZB 29
ZZB "C1'" "C1'" C 0 1 N N R N N N 16.609 -1.453 15.357 1.169 0.960 0.109 "C1'" ZZB 30
ZZB F F F 0 1 N N N N N N 18.895 -2.641 7.106 -6.877 -1.796 -0.195 F ZZB 31
ZZB O1 O1 O 0 1 N N N N N N 16.510 0.597 11.427 -1.697 -0.404 -2.786 O1 ZZB 32
ZZB B B B -1 1 N N N N N N 17.371 -0.370 12.036 -1.529 -0.503 -1.430 B ZZB 33
ZZB CF CF C 0 1 N N N N N N 21.891 -5.243 9.893 -5.354 -0.430 4.333 CF ZZB 34
ZZB CK CK C 0 1 N N N N N N 20.744 -4.390 10.474 -4.518 -0.453 3.052 CK ZZB 35
ZZB ND ND N 0 1 N N N N N N 20.076 -3.712 9.346 -5.346 -0.919 1.937 ND ZZB 36
ZZB HB HB H 0 1 N N N N N N 16.863 1.321 9.584 -2.500 -2.247 -3.330 HB ZZB 37
ZZB HBA HBA H 0 1 N N N N N N 15.513 0.110 9.760 -3.368 -0.817 -3.958 HBA ZZB 38
ZZB HD1 HD1 H 0 1 N N N N N N 17.229 -0.703 7.572 -5.647 -1.915 -2.496 HD1 ZZB 39
ZZB HE2 HE2 H 0 1 N N N N N N 19.324 -2.599 11.642 -2.855 -0.343 1.257 HE2 ZZB 40
ZZB H8 H8 H 0 1 N N N N N N 16.257 0.932 16.652 3.764 1.793 -0.775 H8 ZZB 41
ZZB HN6 HN6 H 0 1 N N N N N N 13.525 -2.012 21.157 3.601 6.610 -0.431 HN6 ZZB 42
ZZB HN6A HN6A H 0 0 N N N N N N 14.283 -0.653 20.660 2.466 7.753 0.047 HN6A ZZB 43
ZZB H2 H2 H 0 1 N N N N N N 14.338 -5.089 18.119 -1.255 5.410 1.256 H2 ZZB 44
ZZB "H5'" "H5'" H 0 1 N N N N N N 19.191 -0.078 16.572 3.239 -1.950 -1.256 "H5'" ZZB 45
ZZB "H5'A" "H5'A" H 0 0 N N N N N N 20.636 -0.489 15.619 2.078 -3.239 -0.860 "H5'A" ZZB 46
ZZB "H4'" "H4'" H 0 1 N N N N N N 19.451 -1.725 14.069 0.922 -1.651 0.719 "H4'" ZZB 47
ZZB "H3'" "H3'" H 0 1 N N N N N N 18.203 0.817 14.848 1.112 -1.236 -2.276 "H3'" ZZB 48
ZZB "H2'" "H2'" H 0 1 N N N N N N 15.712 0.103 14.123 0.717 1.157 -2.055 "H2'" ZZB 49
ZZB "H1'" "H1'" H 0 1 N N N N N N 15.710 -2.078 15.461 0.495 0.944 0.966 "H1'" ZZB 50
ZZB HF HF H 0 1 N N N N N N 21.695 -5.446 8.830 -4.738 -0.083 5.163 HF ZZB 51
ZZB HFA HFA H 0 1 N N N N N N 22.841 -4.697 9.993 -6.201 0.244 4.203 HFA ZZB 52
ZZB HFB HFB H 0 1 N N N N N N 21.955 -6.194 10.442 -5.718 -1.434 4.547 HFB ZZB 53
ZZB HK HK H 0 1 N N N N N N 20.027 -5.033 11.007 -4.153 0.552 2.838 HK ZZB 54
ZZB HKA HKA H 0 1 N N N N N N 21.137 -3.652 11.189 -3.671 -1.126 3.182 HKA ZZB 55
ZZB HND HND H 0 1 N N N N N N 19.561 -4.432 8.881 -6.275 -1.155 2.088 HND ZZB 56
ZZB H1P H1P H 0 1 N N N N N N 21.142 -4.395 17.559 3.289 -5.538 0.953 H1P ZZB 57
ZZB H2P H2P H 0 1 N N N N N N 21.989 -2.328 15.613 6.006 -4.439 2.127 H2P ZZB 58
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ZZB CB CG SING N N 1
ZZB CB O1 SING N N 2
ZZB CG CD1 DOUB Y N 3
ZZB CG CD2 SING Y N 4
ZZB CD1 CE1 SING Y N 5
ZZB CD2 CE2 DOUB Y N 6
ZZB CD2 B SING N N 7
ZZB CE1 CZ DOUB Y N 8
ZZB CE1 F SING N N 9
ZZB CE2 CZ SING Y N 10
ZZB CZ ND SING N N 11
ZZB P O1P SING N N 12
ZZB P O2P SING N N 13
ZZB P O3P DOUB N N 14
ZZB P "O5'" SING N N 15
ZZB N9 C8 SING Y N 16
ZZB N9 C4 SING Y N 17
ZZB N9 "C1'" SING N N 18
ZZB C8 N7 DOUB Y N 19
ZZB N7 C5 SING Y N 20
ZZB C5 C6 DOUB Y N 21
ZZB C5 C4 SING Y N 22
ZZB C6 N6 SING N N 23
ZZB C6 N1 SING Y N 24
ZZB N1 C2 DOUB Y N 25
ZZB C2 N3 SING Y N 26
ZZB N3 C4 DOUB Y N 27
ZZB "O5'" "C5'" SING N N 28
ZZB "C5'" "C4'" SING N N 29
ZZB "C4'" "O4'" SING N N 30
ZZB "C4'" "C3'" SING N N 31
ZZB "O4'" "C1'" SING N N 32
ZZB "C3'" "O3'" SING N N 33
ZZB "C3'" "C2'" SING N N 34
ZZB "O3'" B SING N N 35
ZZB "C2'" "O2'" SING N N 36
ZZB "C2'" "C1'" SING N N 37
ZZB "O2'" B SING N N 38
ZZB O1 B SING N N 39
ZZB CF CK SING N N 40
ZZB CK ND SING N N 41
ZZB CB HB SING N N 42
ZZB CB HBA SING N N 43
ZZB CD1 HD1 SING N N 44
ZZB CE2 HE2 SING N N 45
ZZB C8 H8 SING N N 46
ZZB N6 HN6 SING N N 47
ZZB N6 HN6A SING N N 48
ZZB C2 H2 SING N N 49
ZZB "C5'" "H5'" SING N N 50
ZZB "C5'" "H5'A" SING N N 51
ZZB "C4'" "H4'" SING N N 52
ZZB "C3'" "H3'" SING N N 53
ZZB "C2'" "H2'" SING N N 54
ZZB "C1'" "H1'" SING N N 55
ZZB CF HF SING N N 56
ZZB CF HFA SING N N 57
ZZB CF HFB SING N N 58
ZZB CK HK SING N N 59
ZZB CK HKA SING N N 60
ZZB ND HND SING N N 61
ZZB O1P H1P SING N N 62
ZZB O2P H2P SING N N 63
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ZZB SMILES_CANONICAL CACTVS 3.341 CCNc1cc2c(CO[B-]23O[C@@H]4[C@@H](CO[P](O)(O)=O)O[C@H]([C@@H]4O3)n5cnc6c(N)ncnc56)cc1F
ZZB SMILES CACTVS 3.341 CCNc1cc2c(CO[B-]23O[CH]4[CH](CO[P](O)(O)=O)O[CH]([CH]4O3)n5cnc6c(N)ncnc56)cc1F
ZZB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "[B@@-]12(c3cc(c(cc3CO1)F)NCC)O[C@@H]4[C@H](O[C@H]([C@@H]4O2)n5cnc6c5ncnc6N)COP(=O)(O)O"
ZZB SMILES "OpenEye OEToolkits" 1.5.0 "[B-]12(c3cc(c(cc3CO1)F)NCC)OC4C(OC(C4O2)n5cnc6c5ncnc6N)COP(=O)(O)O"
ZZB InChI InChI 1.03 InChI=1S/C19H22BFN6O8P/c1-2-23-12-4-10-9(3-11(12)21)5-31-20(10)34-15-13(6-32-36(28,29)30)33-19(16(15)35-20)27-8-26-14-17(22)24-7-25-18(14)27/h3-4,7-8,13,15-16,19,23H,2,5-6H2,1H3,(H2,22,24,25)(H2,28,29,30)/q-1/t13-,15-,16-,19-,20+/m1/s1
ZZB InChIKey InChI 1.03 KLENTOAZKNOXCI-JNRNKGNBSA-N
#
_pdbx_chem_comp_identifier.comp_id ZZB
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 1.5.0
_pdbx_chem_comp_identifier.identifier
"[(1S,3S,5R,6R,8R)-6-(6-aminopurin-9-yl)-4'-ethylamino-3'-fluoro-spiro[2,4,7-trioxa-3-boranuidabicyclo[3.3.0]octane-3,7'-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-triene]-8-yl]methyl dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ZZB 'Create component' 2009-04-06 EBI
ZZB 'Modify aromatic_flag' 2011-06-04 RCSB
ZZB 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ZZB CB C 9.555 -4.268 1
ZZB CG C 11.055 -4.268 2
ZZB CD1 C 12.082 -5.446 3
ZZB CD2 C 11.518 -2.842 4
ZZB CE1 C 13.613 -5.132 5
ZZB CE2 C 13.042 -2.493 6
ZZB CZ C 14.096 -3.646 7
ZZB P P 14.673 4.167 8
ZZB O1P O 16.099 4.633 9
ZZB O2P O 14.207 5.593 10
ZZB O3P O 15.139 2.742 11
ZZB N9 N 7.672 2.233 12
ZZB C8 C 6.465 1.358 13
ZZB N7 N 5.258 2.233 14
ZZB C5 C 5.715 3.653 15
ZZB C6 C 4.965 4.952 16
ZZB N6 N 3.465 4.952 17
ZZB N1 N 5.715 6.251 18
ZZB C2 C 7.215 6.251 19
ZZB N3 N 7.965 4.952 20
ZZB C4 C 7.215 3.653 21
ZZB "O5'" O 13.247 3.701 22
ZZB "C5'" C 12.938 2.233 23
ZZB "C4'" C 11.512 1.768 24
ZZB "O4'" O 10.305 2.643 25
ZZB "C3'" C 11.055 0.348 26
ZZB "O3'" O 11.518 -1.078 27
ZZB "C2'" C 9.555 0.348 28
ZZB "O2'" O 9.091 -1.078 29
ZZB "C1'" C 9.098 1.768 30
ZZB F F 14.613 -6.251 31
ZZB O1 O 9.091 -2.842 32
ZZB B B 10.305 -1.960 33
ZZB CF C 18.036 -4.122 34
ZZB CK C 16.570 -4.440 35
ZZB ND N 15.562 -3.329 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ZZB CB CG SINGLE NONE 1
ZZB CB O1 SINGLE NONE 2
ZZB CG CD1 DOUBLE NONE 3
ZZB CG CD2 SINGLE NONE 4
ZZB CD1 CE1 SINGLE NONE 5
ZZB CD2 CE2 DOUBLE NONE 6
ZZB CD2 B SINGLE NONE 7
ZZB CE1 CZ DOUBLE NONE 8
ZZB CE1 F SINGLE NONE 9
ZZB CE2 CZ SINGLE NONE 10
ZZB CZ ND SINGLE NONE 11
ZZB P O1P SINGLE NONE 12
ZZB P O2P SINGLE NONE 13
ZZB P O3P DOUBLE NONE 14
ZZB P "O5'" SINGLE NONE 15
ZZB N9 C8 SINGLE NONE 16
ZZB N9 C4 SINGLE NONE 17
ZZB "C1'" N9 SINGLE BEGINDASH 18
ZZB C8 N7 DOUBLE NONE 19
ZZB N7 C5 SINGLE NONE 20
ZZB C5 C6 SINGLE NONE 21
ZZB C5 C4 DOUBLE NONE 22
ZZB C6 N6 SINGLE NONE 23
ZZB C6 N1 DOUBLE NONE 24
ZZB N1 C2 SINGLE NONE 25
ZZB C2 N3 DOUBLE NONE 26
ZZB N3 C4 SINGLE NONE 27
ZZB "O5'" "C5'" SINGLE NONE 28
ZZB "C4'" "C5'" SINGLE BEGINDASH 29
ZZB "C4'" "O4'" SINGLE NONE 30
ZZB "C4'" "C3'" SINGLE NONE 31
ZZB "O4'" "C1'" SINGLE NONE 32
ZZB "C3'" "O3'" SINGLE NONE 33
ZZB "C3'" "C2'" SINGLE NONE 34
ZZB B "O3'" SINGLE BEGINDASH 35
ZZB "C2'" "O2'" SINGLE NONE 36
ZZB "C2'" "C1'" SINGLE NONE 37
ZZB "O2'" B SINGLE NONE 38
ZZB O1 B SINGLE NONE 39
ZZB CF CK SINGLE NONE 40
ZZB CK ND SINGLE NONE 41
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ZZB MurckoScaffold S1 scaffold 'c1ccc2c(c1)CO[B@@-]21O[C@H]2[C@H](n3cnc4cncnc43)OC[C@H]2O1' InChI=1S/C16H14BN4O4/c1-2-4-11-10(3-1)6-23-17(11)24-13-7-22-16(14(13)25-17)21-9-20-12-5-18-8-19-15(12)21/h1-5,8-9,13-14,16H,6-7H2/q-1/t13-,14-,16-,17+/m1/s1 AVEHYPOCGBHJJD-SRABZTEZSA-N
ZZB adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
ZZB imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
ZZB phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
ZZB phosphate F4 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
ZZB purine F5 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
ZZB pyrimidine F6 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
ZZB ribose F7 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ZZB CB S1 1
ZZB CG S1 1
ZZB CD1 S1 1
ZZB CD2 S1 1
ZZB CE1 S1 1
ZZB CE2 S1 1
ZZB CZ S1 1
ZZB N9 S1 1
ZZB C8 S1 1
ZZB N7 S1 1
ZZB C5 S1 1
ZZB C6 S1 1
ZZB N1 S1 1
ZZB C2 S1 1
ZZB N3 S1 1
ZZB C4 S1 1
ZZB "C4'" S1 1
ZZB "O4'" S1 1
ZZB "C3'" S1 1
ZZB "O3'" S1 1
ZZB "C2'" S1 1
ZZB "O2'" S1 1
ZZB "C1'" S1 1
ZZB O1 S1 1
ZZB B S1 1
ZZB N1 F1 1
ZZB C6 F1 1
ZZB C5 F1 1
ZZB C4 F1 1
ZZB N3 F1 1
ZZB C2 F1 1
ZZB N9 F1 1
ZZB C8 F1 1
ZZB N7 F1 1
ZZB N6 F1 1
ZZB C5 F2 1
ZZB C4 F2 1
ZZB N9 F2 1
ZZB C8 F2 1
ZZB N7 F2 1
ZZB CG F3 1
ZZB CD1 F3 1
ZZB CE1 F3 1
ZZB CZ F3 1
ZZB CE2 F3 1
ZZB CD2 F3 1
ZZB O1P F4 1
ZZB P F4 1
ZZB O3P F4 1
ZZB O2P F4 1
ZZB "O5'" F4 1
ZZB N7 F5 1
ZZB C8 F5 1
ZZB N9 F5 1
ZZB C4 F5 1
ZZB C5 F5 1
ZZB C6 F5 1
ZZB N1 F5 1
ZZB C2 F5 1
ZZB N3 F5 1
ZZB C5 F6 1
ZZB C6 F6 1
ZZB N1 F6 1
ZZB C2 F6 1
ZZB N3 F6 1
ZZB C4 F6 1
ZZB "C2'" F7 1
ZZB "C3'" F7 1
ZZB "C4'" F7 1
ZZB "O4'" F7 1
ZZB "C1'" F7 1
ZZB "C5'" F7 1
ZZB "O5'" F7 1
ZZB "O3'" F7 1
ZZB "O2'" F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ZZB
_pdbe_chem_comp_rdkit_properties.exactmw 523.132
_pdbe_chem_comp_rdkit_properties.amw 523.203
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 14
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 14
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 58
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 17
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.421
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 1
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 233.931
_pdbe_chem_comp_rdkit_properties.tpsa 185.330
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.098
_pdbe_chem_comp_rdkit_properties.CrippenMR 118.008
_pdbe_chem_comp_rdkit_properties.chi0v 17.746
_pdbe_chem_comp_rdkit_properties.chi1v 10.784
_pdbe_chem_comp_rdkit_properties.chi2v 5.131
_pdbe_chem_comp_rdkit_properties.chi3v 5.131
_pdbe_chem_comp_rdkit_properties.chi4v 3.633
_pdbe_chem_comp_rdkit_properties.chi0n 38.852
_pdbe_chem_comp_rdkit_properties.chi1n 19.981
_pdbe_chem_comp_rdkit_properties.chi2n 4.816
_pdbe_chem_comp_rdkit_properties.chi3n 4.816
_pdbe_chem_comp_rdkit_properties.chi4n 3.438
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.685
_pdbe_chem_comp_rdkit_properties.kappa1 9.563
_pdbe_chem_comp_rdkit_properties.kappa2 8.429
_pdbe_chem_comp_rdkit_properties.kappa3 3.775
_pdbe_chem_comp_rdkit_properties.Phi 2.239
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ZZB UniChem PDBe ZZB
ZZB UniChem ZINC ZINC000263620651
ZZB UniChem PubChem 25271563
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ZZB CB 2.648 -3.026 -2.231 ETKDGv3 1
ZZB CG 3.373 -2.203 -1.234 ETKDGv3 2
ZZB CD1 4.673 -2.237 -0.925 ETKDGv3 3
ZZB CD2 2.482 -1.306 -0.585 ETKDGv3 4
ZZB CE1 5.177 -1.310 0.122 ETKDGv3 5
ZZB CE2 2.885 -0.456 0.364 ETKDGv3 6
ZZB CZ 4.331 -0.452 0.747 ETKDGv3 7
ZZB P -1.508 3.812 -3.365 ETKDGv3 8
ZZB O1P -3.113 3.352 -3.643 ETKDGv3 9
ZZB O2P -0.740 4.056 -4.852 ETKDGv3 10
ZZB O3P -1.479 5.102 -2.575 ETKDGv3 11
ZZB N9 -2.291 -0.810 1.780 ETKDGv3 12
ZZB C8 -2.336 -2.004 2.574 ETKDGv3 13
ZZB N7 -3.532 -2.500 2.710 ETKDGv3 14
ZZB C5 -4.363 -1.617 1.965 ETKDGv3 15
ZZB C6 -5.770 -1.783 1.579 ETKDGv3 16
ZZB N6 -6.576 -2.818 2.139 ETKDGv3 17
ZZB N1 -6.267 -0.958 0.696 ETKDGv3 18
ZZB C2 -5.455 0.085 0.100 ETKDGv3 19
ZZB N3 -4.199 0.221 0.435 ETKDGv3 20
ZZB C4 -3.654 -0.664 1.422 ETKDGv3 21
ZZB "O5'" -0.685 2.585 -2.512 ETKDGv3 22
ZZB "C5'" -1.369 2.348 -1.304 ETKDGv3 23
ZZB "C4'" -0.662 1.232 -0.530 ETKDGv3 24
ZZB "O4'" -1.316 1.028 0.699 ETKDGv3 25
ZZB "C3'" -0.658 -0.092 -1.300 ETKDGv3 26
ZZB "O3'" 0.596 -0.338 -1.865 ETKDGv3 27
ZZB "C2'" -0.945 -1.128 -0.258 ETKDGv3 28
ZZB "O2'" 0.144 -1.997 -0.154 ETKDGv3 29
ZZB "C1'" -1.133 -0.327 1.031 ETKDGv3 30
ZZB F 6.496 -1.339 0.439 ETKDGv3 31
ZZB O1 1.275 -2.653 -2.211 ETKDGv3 32
ZZB B 1.088 -1.560 -1.201 ETKDGv3 33
ZZB CF 4.754 2.208 3.481 ETKDGv3 34
ZZB CK 3.961 1.390 2.467 ETKDGv3 35
ZZB ND 4.826 0.443 1.762 ETKDGv3 36
ZZB HB 3.066 -2.847 -3.244 ETKDGv3 37
ZZB HBA 2.743 -4.102 -1.974 ETKDGv3 38
ZZB HD1 5.345 -2.923 -1.424 ETKDGv3 39
ZZB HE2 2.170 0.205 0.834 ETKDGv3 40
ZZB H8 -1.458 -2.473 2.997 ETKDGv3 41
ZZB HN6 -6.181 -3.478 2.845 ETKDGv3 42
ZZB HN6A -7.574 -2.926 1.849 ETKDGv3 43
ZZB H2 -5.888 0.745 -0.639 ETKDGv3 44
ZZB "H5'" -1.365 3.262 -0.668 ETKDGv3 45
ZZB "H5'A" -2.423 2.037 -1.492 ETKDGv3 46
ZZB "H4'" 0.382 1.558 -0.319 ETKDGv3 47
ZZB "H3'" -1.439 -0.120 -2.094 ETKDGv3 48
ZZB "H2'" -1.859 -1.706 -0.528 ETKDGv3 49
ZZB "H1'" -0.229 -0.409 1.676 ETKDGv3 50
ZZB HF 5.550 2.787 2.966 ETKDGv3 51
ZZB HFA 5.217 1.537 4.236 ETKDGv3 52
ZZB HFB 4.075 2.917 4.001 ETKDGv3 53
ZZB HK 3.494 2.083 1.734 ETKDGv3 54
ZZB HKA 3.161 0.834 3.002 ETKDGv3 55
ZZB HND 5.844 0.417 2.004 ETKDGv3 56
ZZB H1P -3.494 4.083 -4.193 ETKDGv3 57
ZZB H2P 0.207 4.234 -4.621 ETKDGv3 58
#