spacer
spacer

PDBsum entry 4yvc

Go to PDB code: 
protein ligands Protein-protein interface(s) links
Transferase/transferase inhibitor PDB id
4yvc

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
388 a.a.
Ligands
4KH ×2
Waters ×26
PDB id:
4yvc
Name: Transferase/transferase inhibitor
Title: Rock 1 bound to thiazole inhibitor
Structure: Rho-associated protein kinase 1. Chain: a, b. Fragment: n-terminal kinase domain (unp residues 6-415). Synonym: renal carcinoma antigen ny-ren-35, rho-associated, coiled- coil-containing protein kinase 1, coiled-coil-containing protein kinase i, rock-i, p160 rock-1, p160rock. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: rock1. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108.
Resolution:
3.20Å     R-factor:   0.193     R-free:   0.221
Authors: M.D.Jacobs
Key ref: J.Green et al. (2015). Design, Synthesis, and Structure-Activity Relationships of Pyridine-Based Rho Kinase (ROCK) Inhibitors. J Med Chem, 58, 5028-5037. PubMed id: 26039570 DOI: 10.1021/acs.jmedchem.5b00424
Date:
19-Mar-15     Release date:   10-Jun-15    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q13464  (ROCK1_HUMAN) -  Rho-associated protein kinase 1 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1354 a.a.
388 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.1  - non-specific serine/threonine protein kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H+
2. L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H+
L-seryl-[protein]
+ ATP
= O-phospho-L-seryl-[protein]
+ ADP
+ H(+)
L-threonyl-[protein]
+ ATP
= O-phospho-L-threonyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1021/acs.jmedchem.5b00424 J Med Chem 58:5028-5037 (2015)
PubMed id: 26039570  
 
 
Design, Synthesis, and Structure-Activity Relationships of Pyridine-Based Rho Kinase (ROCK) Inhibitors.
J.Green, J.Cao, U.K.Bandarage, H.Gao, J.Court, C.Marhefka, M.Jacobs, P.Taslimi, D.Newsome, T.Nakayama, S.Shah, S.Rodems.
 
  ABSTRACT  
 
The Rho kinases (ROCK1 and ROCK2) are highly homologous serine/threonine kinases that act on substrates associated with cellular motility, morphology, and contraction and are of therapeutic interest in diseases associated with cellular migration and contraction, such as hypertension, glaucoma, and erectile dysfunction. Beginning with compound 4, an inhibitor of ROCK1 identified through high-throughput screening, systematic exploration of SAR, and application of structure-based design, led to potent and selective ROCK inhibitors. Compound 37 represents significant improvements in inhibition potency, kinase selectivity, and CYP inhibition and possesses pharmacokinetics suitable for in vivo experimentation.
 

 

spacer

spacer