 |
PDBsum entry 5wdp
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Oncoprotein, hydrolase
|
PDB id
|
|
|
|
5wdp
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
PDB id:
|
 |
|
 |
| Name: |
 |
Oncoprotein, hydrolase
|
 |
|
Title:
|
 |
H-ras mutant l120a bound to gmp-pnp at 277k
|
|
Structure:
|
 |
Gtpase hras. Chain: a. Synonym: h-ras-1, ha-ras, transforming protein p21, c-h-ras, p21ras. Engineered: yes. Mutation: yes
|
|
Source:
|
 |
Homo sapiens. Human. Organism_taxid: 9606. Gene: hras, hras1. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
|
|
Resolution:
|
 |
|
1.35Å
|
R-factor:
|
0.146
|
R-free:
|
0.154
|
|
|
Authors:
|
 |
J.C.Cofsky,P.Bandaru,C.L.Gee,J.Kuriyan
|
|
Key ref:
|
 |
P.Bandaru
et al.
(2017).
Deconstruction of the ras switching cycle through sat mutagenesis..
Elife,
6,
.
PubMed id:
|
 |
|
Date:
|
 |
|
05-Jul-17
|
Release date:
|
19-Jul-17
|
|
|
|
|
|
PROCHECK
|
|
|
|
|
Headers
|
 |
|
|
References
|
|
|
|
|
|
|
P01112
(RASH_HUMAN) -
GTPase HRas from Homo sapiens
|
|
|
|
Seq: Struc:
|
 |
 |
 |
189 a.a.
166 a.a.*
|
|
|
|
|
|
|
|
|
 |
 |
|
|
Key: |
 |
PfamA domain |
 |
 |
 |
Secondary structure |
 |
|
*
PDB and UniProt seqs differ
at 1 residue position (black
cross)
|
|
|
|
|
 |
|
|
 |
 |
 |
 |
Enzyme class:
|
 |
E.C.3.6.5.2
- small monomeric GTPase.
|
|
 |
 |
 |
 |
 |
Reaction:
|
 |
GTP + H2O = GDP + phosphate + H+
|
 |
 |
 |
 |
 |
GTP
|
+
|
H2O
|
=
|
GDP
Bound ligand (Het Group name = )
matches with 81.82% similarity
|
+
|
phosphate
|
+
|
H(+)
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
|
|
 |
');
}
}
 |