![image of Helen Parkinson](https://content.embl.org//sites/default/files/styles/medium/public/persons/CP-60002372.jpg?itok=ee4BkbMV)
Helen Parkinson
Team Leader and Senior Scientist
Samples, phenotypes and ontologies
EditDelivering databases and interoperability tools for mammalian models of disease, GWAS, PGS and Polygenic Scores.
Team Leader and Senior Scientist
Samples, phenotypes and ontologies
EditBubastis is an ontology change tool which is able to analyse two ontologies (typically two versions of the same ontology) to highlight logical changes which have occurred and to present these changes in more or less detail, as required
CancerModels.Org is a research platform that aggregates, standardises, and integrates the complex and diverse data associated with patient-derived cancer models (PDCMs) using FAIR principles. It provides a unified point for PDCM stakeholders, from basic and clinical researchers to bioinfo…
The eQTL Catalogue aims to provide uniformly processed gene expression and splicing QTLs from all available public studies on human.
Renamed InfraFrontier
EFO is a data-driven ontology that imports parts of existing community ontologies into a single framework. It is used for annotation, curation, query and visualisation of data by the Gene Expression Atlas, NHGRI GWAS Catalog, BioSamples database, and is being mapped to Ensembl variation.
The International Mouse Phenotyping Consortium (IMPC) has initiated a global effort to generate and characterize a knockout mouse strain for every protein-coding gene in the mouse genome. EBI, The Wellcome Trust Sanger Institute and MRC Harwell deliver informatics as part of the MPI2 consortium acti…
The GWAS Catalog is provided jointly by the http://www.genome.gov/"http://www.genome.gov/"”>http://www.genome.gov/"National Human Genome Research Institute (NHGRI) and the http://www.ebi.ac.uk/"http://www.ebi.ac.uk/"”>http://www.ebi.ac.uk/"European Bioinformatics Institute…
The OLS provides a web service interface to query multiple ontologies from a single location with a unified output format.The OLS can integrate any ontology available in the Open Biomedical Ontology (OBO) format.
A polygenic score (PGS) aggregates the effects of many genetic variants into a single number which predicts genetic predisposition for a phenotype. PGS are typically composed of hundreds-to-millions of genetic variants (usually SNPs) which are combined using a weighted sum of allele dosages multipli…
Webulous is an application suite for collaborative ontology development, designed to support authoring ontologies by populating ontology design patterns through simple user interfaces.
Zooma is a curator environment for discovering optimal ontology annotations based on real, manually reviewed data.
We are looking for an experienced Human Resources Professional who is excited by the challenge of providing an excellent service in a stimulating international environment. The EMBL Human Resources unit is responsible for the Laboratory’s staff of approx. 1900 employees from over 80 nations working …
Closes on 2nd March. Posted 14th February 2025
EditOur Human Resources Department is responsible to deliver high quality HR services to all EMBL personnel working at EMBL Headquarters in Heidelberg and its 5 sites across Europe. We are looking for a motivated individual who is interested in gaining experience in HR administration and excited by the …
Closes on 9th March. Posted 14th February 2025
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