Viperin (M-CSA:965)

Proteins that are close homologues to the M-CSA reference protein and have the same catalytic residues (highlighted in green, below) probably share the same mechanism. Please also check if the homologue shares the same FunTree Structural Cluster and the same Pfam family, as another measure of similarity.

Legend:
Reference Residue Conserved Residue Non Conserved Residue Outside Alignment Reference Residue not in this chain

The residue id shown is the one in the PDB sequence. This may be different from the resid given by the author of the PDB file.

PDB sequences identical to 5vsm

In these PDB chains all the catalytic residues are conserved and have the same numbering as the reference.

5vsl(A, B)

PDB sequences homologous to 5vsm

Reference PDB chains/ identical chains Homologous PDB chains Cys84(40)A Cys88(44)A Cys91(47)A
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
6b4c(I,E,F,B,K,G,L,D,H,J,A,C)
PfamFunTree
x x x
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
Cys40 Cys44 Cys47
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
6q2p(B,A)
PfamFunTree
6q2q(B,A)
PfamFunTree
x x x
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
7n7i(B,A,C)
PfamFunTree
x x x
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
7n7h(A)
PfamFunTree
x x x
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
6b4c(I,E,F,B,K,G,L,D,H,J,A,C)
PfamFunTree
x x x
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
Cys40 Cys44 Cys47
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
6q2p(B,A)
PfamFunTree
6q2q(B,A)
PfamFunTree
x x x
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
7n7i(B,A,C)
PfamFunTree
x x x
5vsm(B,A)
PfamFunTree
5vsl(B,A)
PfamFunTree
7n7h(A)
PfamFunTree
x x x