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Accessing UniProt data programmatically

Tasks which can be performed programmatically

  • Retrieval of individual entries
  • Batch retrieval of entries
  • Retrieval of entries via queries
  • Release number and date
  • Convert between different data formats
  • Query variation data from UniProt as well as from large-scale sources such 1000 Genomes and ExAC
  • Query by genome coordinates to find proteins
  • Retrieve all positional sequence features for an entry

Ways to access UniProt programmatically

UniProt provides several application programming interfaces (APIs) to query and access its data programmatically (Click on the tabs below to see details).