11.4 | | MYL2 | 'tumor tissue' vs 'adjacent non-tumor tissue' | sampling site | RNA-seq of prostate cancer and adjacent normal tissues from 14 patients |
-9.8 | | MYL2 | 'induced pluripotent stem cell' vs 'cardiac muscle cell' | cell type | Gene expression profiling by RNA-seq of human iPSC and iPSC-derived cardiomyocytes from an Yoruban individual (NA19101) |
-7.7 | | MYL2 | 'oral squamous cell carcinoma; neoplasm' vs 'normal; 5 mm beyond neoplasm as visible by narrow band imaging' in 'mouth floor' | organism part, sampling site | Transcription profiling by array of oral squamous cell cancer (OSCC) surgical margins defined by narrow band imaging. |
6.9 | | MYL2 | '5 mm beyond neoplasm as visible by narrow band imaging' vs '5 mm beyond neoplasm as visible by white light' in 'normal; mouth floor' | organism part, sampling site | Transcription profiling by array of oral squamous cell cancer (OSCC) surgical margins defined by narrow band imaging. |
5.7 | | MYL2 | '5-aza-deoxycytidine and trichostatin' vs 'none' in 'HPAF1' | cell line, compound | Transcription profiling by array of two human epithelial acinar cell lines, HPAM1 and HPAF1, with global DNA demethylation by 5-aza-deoxycytidine and trichostatin against controls with normal mehtylation levels |
5.6 | | MYL2 | '5-aza-deoxycytidine and trichostatin' vs 'none' in 'HPAM1' | cell line, compound | Transcription profiling by array of two human epithelial acinar cell lines, HPAM1 and HPAF1, with global DNA demethylation by 5-aza-deoxycytidine and trichostatin against controls with normal mehtylation levels |
4 | | MYL2 | 'shRNA knockdown of PROX1' vs 'wild type phenotype' in 'U-343_MGa' | cell line, phenotype | RNA-seq analysis of PROX1 overexpression and knockdown in glioblastoma cell lines |
-4 | | MYL2 | 'breast carcinoma' vs 'normal' | block, disease | RNA-seq of blood platelets from six tumor types and healthy donors |
-3.6 | | MYL2 | 'colorectal carcinoma' vs 'normal' | block, disease | RNA-seq of blood platelets from six tumor types and healthy donors |
-3.6 | | MYL2 | 'pancreatic adenocarcinoma' vs 'normal' | block, disease | RNA-seq of blood platelets from six tumor types and healthy donors |
3.3 | | MYL2 | 'MCT8[P321L]' vs 'correction to MCT8[wt]' in 'derived brain microvascular endothelial cell' | cell type, compound, genotype | RNA-seq analysis of MCT8-deficient and healthy control brain microvascular endothelial cells (BMECs) and neural cells |
-3.2 | | MYL2 | '501Mel; shBRG1 knockdown' vs '501Mel; control' | cell line, phenotype | BRG1 recruitment by transcription factors MITF and SOX10 defines a specific configuration of regulatory elements in the melanocyte lineage (RNA-seq) |
3.2 | | MYL2 | 'Banff score cg greater than 0' vs 'Banff score cg equal 0' in 'kidney transplant negative crossmatch recipient; normal; less than or equal to 1 year' | clinical history, clinical information, phenotype, time | Intragraft Gene Expression in Positive Crossmatch Kidney Allografts: Ongoing Inflammation Mediates Chronic Antibody-Mediated Injury |
3 | | MYL2 | 'Neurobasal medium' vs 'DMEM/F12 with glutamax' | growth condition | RNA sequencing of human iPSC-derived brain microvascular endothelial cells. |
-2.7 | | MYL2 | '450 micromole per liter' vs '50 micromole per liter' in 'doxorubicin' at '2 day' | compound, sampling time point | Transcription profiling by array to investigate doxorubicin-induced toxicity in human cardiomyocytes derived from embryonic stem cell line SA121 |
-2.7 | | MYL2 | 'hepatobiliary carcinoma' vs 'normal' | block, disease | RNA-seq of blood platelets from six tumor types and healthy donors |
-2.6 | | MYL2 | 'doxorubicin; 450 micromole per liter' vs 'none' at '2 day' | compound, sampling time point | Transcription profiling by array to investigate doxorubicin-induced toxicity in human cardiomyocytes derived from embryonic stem cell line SA121 |
-2.5 | | MYL2 | '450 micromole per liter' vs '150 micromole per liter' in 'doxorubicin' at '2 day' | compound, sampling time point | Transcription profiling by array to investigate doxorubicin-induced toxicity in human cardiomyocytes derived from embryonic stem cell line SA121 |
-2.5 | | MYL2 | 'familial hemophagocytic lymphohistiocytosis 5' vs 'normal' | disease | RNAseq on PBMC of three patients with Familial Hemophagocytic Lymphohistiocytosis Type 5 (FHL5) and three age and sex-matched controls |
2.4 | | MYL2 | 'trichostatin A; 500 nanomolar' vs 'control' | compound | Transcription profiling by high throughput sequencing of human aortic endothelial cell treated with TSA |
-2.2 | | MYL2 | 'non-small cell lung carcinoma' vs 'normal' | block, disease | RNA-seq of blood platelets from six tumor types and healthy donors |
2.2 | | MYL2 | 'suberoylanilide hydroxamic acid' vs 'control' | compound | Vascular histone deacetylation by pharmacological HDAC inhibition [SAHA, RNA-seq] |
2 | | MYL2 | 'cisplatin; 100 micromolar' vs 'none' in 'TMEM45A knockdown by siRNA' | RNA interference, compound | RNA-seq of human head and neck cancer cell line SQD9 knock-out for TMEM45A exposed to cisplatin |
-2 | | MYL2 | 'suberoylanilide hydroxamic acid 10 millimolar' vs 'none' | compound, dose | Transcription profiling by array of A204 cells after treatment with SAHA |
-1.9 | | MYL2 | 'glioblastoma' vs 'normal' | block, disease | RNA-seq of blood platelets from six tumor types and healthy donors |
1.9 | | MYL2 | 'kidney transplant; transplant rejection; borderline' vs 'none; normal; none' | clinical information, disease, disease staging | Expression of the IL-17/Th17 axis in the development of acute renal allograft rejection |
-1.8 | | MYL2 | 'orlistat; 20 micromolar' vs 'dimethyl sulfoxide' | compound | Transcription profiling by array of human HEK293-M2 cells to identify human ORFs conferring resistance to various drug treatments |
1.7 | | MYL2 | 'ZNF84 siRNA' vs 'scrambled siRNA' in 'none' | RNA interference, compound | RNAseq of HCT116 p53KO cells transfected with siRNA silencing ZNF84 or negative control with either doxorubicin treatment or untreated, cultured 72h post-transfection |
1.6 | | MYL2 | 'HCT-116; colon carcinoma; P10' vs 'HCT-116; colon carcinoma; P0' | cell line, disease, passage | Microarray analysis of xenograft models in use at the Developmental Therapeutics Program of the National Cancer Institute (DTP-NCI) |
1.5 | | MYL2 | 'kidney transplant; transplant rejection; acute' vs 'none; normal; none' | clinical information, disease, disease staging | Expression of the IL-17/Th17 axis in the development of acute renal allograft rejection |
1.4 | | MYL2 | 'USP22 knockdown by siRNA' vs 'non-targetting siRNA' | RNA interference | mRNA-seq of HCT116 USP22 knockdown cells |
1.2 | | MYL2 | 'blood alcohol content 0%' vs 'control' in 'time point 1' | sampling time point, treatment | Microarray characterization of gene expression changes in blood during acute ethanol exposure |
-1.2 | | MYL2 | 'AQM' vs 'normal' on 'Affymetrix HG-U133A' | disease | Transcription profiling by array of 12 human muscle diseases |
1.2 | | MYL2 | 'RNF40 knockdown by siRNA' vs 'scrambled siRNA' in 'none' | RNA interference, stimulus | mRNA-seq of HCT116 RNF40 knockdown cells upon TNF-alpha stimulation |
1.2 | | MYL2 | 'cisplatin; 100 micromolar' vs 'none' in 'scrambled siRNA' | RNA interference, compound | RNA-seq of human head and neck cancer cell line SQD9 knock-out for TMEM45A exposed to cisplatin |
1.1 | | MYL2 | 'blood alcohol content 0.02%declining' vs 'control' in 'time point 5' | sampling time point, treatment | Microarray characterization of gene expression changes in blood during acute ethanol exposure |
1.1 | | MYL2 | 'blood alcohol content 0.04%declining' vs 'control' in 'time point 4' | sampling time point, treatment | Microarray characterization of gene expression changes in blood during acute ethanol exposure |
1.1 | | MYL2 | 'blood alcohol content 0.08%' vs 'control' in 'time point 3' | sampling time point, treatment | Microarray characterization of gene expression changes in blood during acute ethanol exposure |
1.1 | | MYL2 | 'RNF40 knockdown by siRNA' vs 'scrambled siRNA' in 'TNFα; 10ng/ml for 30 minutes' | RNA interference, stimulus | mRNA-seq of HCT116 RNF40 knockdown cells upon TNF-alpha stimulation |
-1.1 | | MYL2 | 'doxorubicin; 100 nanomolar' vs 'none' in 'ZNF84 siRNA' | RNA interference, compound | RNAseq of HCT116 p53KO cells transfected with siRNA silencing ZNF84 or negative control with either doxorubicin treatment or untreated, cultured 72h post-transfection |
1.1 | | MYL2 | 'PAX2 siRNA' vs 'control' | RNA interference | Transcription profiling by high throughput sequencing of control- and PAX2-siRNA-transfected human epididymis epithelial cells |
1.1 | | MYL2 | 'Kaposi's sarcoma-associated herpesvirus' vs 'uninfected control' | infect | Comparison of the transcriptome of K-LEC spheroids to control LEC spheroids |
1.1 | | MYL2 | 'transplant rejection' vs 'none' in 'normal' | clinical information, disease | Expression data from human renal allograft biopsies to investigate renal transplant rejection and failure |
-1.1 | | MYL2 | 'Tick-borne encephalitis virus protein E domain DIII' at '6 hour' vs 'none' at '0 hour' | stimulus, time | Transcriptome analysis of human brain microvascular endothelial cells response to interactive DIII domain of protein E of WNV and interactive DIII domain of protein E of TBEV using RNA-seq |
1 | | MYL2 | 'blood alcohol content 0.04%rising' vs 'control' in 'time point 2' | sampling time point, treatment | Microarray characterization of gene expression changes in blood during acute ethanol exposure |
1 | | MYL2 | 'differentiated; hAKPC-P' vs 'undifferentiated; hIPod' | cell type, phenotype | Differentiation of human amniotic fluid kidney progenitor cells into podocytes and comparison with human conditionally immortalized podocytes |
1 | | MYL2 | 'differentiated; hAKPC-P' vs 're-differentiated; hIPod' | cell type, phenotype | Differentiation of human amniotic fluid kidney progenitor cells into podocytes and comparison with human conditionally immortalized podocytes |