ENSMUSG00000064437 (Snord49b)

mus musculus

small nucleolar RNA, C/D box 49B

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Mus musculus
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Showing 7 experiments:
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Created with Highcharts 6.2.0braincentral neural epitheliumcerebellumcolondorsal control neural epitheliumheartkidneylateral nasal prominencelateral prominence neural epitheliumliverlungmandibular archmaxillary archmedial nasal prominenceolfactory pitskeletal muscle tissuespleentestisthymuszone of skin
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Mammalian Kaessmann
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9 in 3 strains - DBA/2J
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9 in 3 strains - CD1
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9 in 3 strains - C57BL/6
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9
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3 Soumillon et al
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14 - embryonic day 10.5
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Proteomics
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Transcriptomics
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Display log2-fold change
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
1.407 × 10-4-4.6
Snord49b"acute exposure to upstream water" vs "acute exposure to control water"environmental history, generationToxicogenomic analysis in liver of mice exposed to polluted groundwater
Adjusted p-valueLog2-fold change
1.4943 × 10-4-4.6
Snord49b"acute exposure to downstream water" vs "acute exposure to control water"environmental history, generationToxicogenomic analysis in liver of mice exposed to polluted groundwater
Adjusted p-valueLog2-fold change
1.7644 × 10-73
Snord49b'Irx3 knockout' vs 'control' at '1 day'genetic modification, timeRNA-Seq of mouse Irx3-KO and Control ME3 cells on days 1 and 7 of adipogenic differentiation
Adjusted p-valueLog2-fold change
2.3025 × 10-62.6
Snord49b'extraembryonic endoderm stem cell; grown in XEN cell medium' vs 'mouse embryonic fibroblast; control'cell type, growth conditionOSKM induce extraembryonic endoderm stem (iXEN) cells in parallel to iPS cells
Adjusted p-valueLog2-fold change
7.5609 × 10-5-2.6
Snord49b'wild type; treated with angiotensin II and a combination of hydralazine and hydrochlorothiazide' vs 'wild type; vehicle'genotype, treatmentEffect of Hypertension of Dendritic Cell Gene Expression
Adjusted p-valueLog2-fold change
9.0868 × 10-3-2.4
Snord49b'neurosphere in differentiation medium; 5 day' vs 'neurosphere; 0 day' in 'wild type genotype'genotype, growth condition, timeTranscriptome analysis of neurospheres derived from Cstb-KO mouse embryo brains during differentiation
Adjusted p-valueLog2-fold change
4.2876 × 10-3-2.3
Snord49b'extracellular vesicle; MET cell culture medium' vs 'none'sampling site, stimulusCellular and extracellular vesicle RNA sequence for E-cadherin-RFP EMT reporter system expressing mouse breast cancer cell line Py2T during EMT/MET
Adjusted p-valueLog2-fold change
3.0363 × 10-3-2.2
Snord49b'neurosphere in differentiation medium; 12 day' vs 'neurosphere; 0 day' in 'wild type genotype'genotype, growth condition, timeTranscriptome analysis of neurospheres derived from Cstb-KO mouse embryo brains during differentiation
Adjusted p-valueLog2-fold change
5.7914 × 10-32.2
Snord49b'induced extraembryonic endoderm stem cell; grown in XEN cell medium' vs 'mouse embryonic fibroblast; control'cell type, growth conditionOSKM induce extraembryonic endoderm stem (iXEN) cells in parallel to iPS cells
Adjusted p-valueLog2-fold change
1.4735 × 10-22.1
Snord49b'α-GalCer; 2 microgram' vs 'none' in 'Cd1d homozyous knockout'compound, genotypeCD1d-dependent immune suppression mediated by regulatory B cells through modulations of iNKT cells
Adjusted p-valueLog2-fold change
4.0967 × 10-3-2
Snord49b'doxycycline-induced inactivation of ErbB3' vs 'ErbB3 expression'phenotypeTranscription profiling by array of mouse mammary epithelial organoids after doxycyline-induced repression of ErbB3 expression
Adjusted p-valueLog2-fold change
9.322 × 10-32
Snord49b'undifferentiated' vs 'differentiated; rosiglitazone' in '129S6sv/ev'phenotype, stimulus, strainRNA-seq of mouse subcutaneous SVF cells before and after differentiation with a brown fat differentiation cocktail
Adjusted p-valueLog2-fold change
3.4924 × 10-41.8
Snord49b'Lkb1 -/- Pten-/-' vs 'wild type'genotypeLoss of Lkb1 and Pten Leads to Lung Squamous Cell Carcinoma with Elevated Pdl1 Expression: Epithelial Cells
Adjusted p-valueLog2-fold change
9.779 × 10-3-1.8
Snord49b'neurosphere in differentiation medium; 12 day' vs 'neurosphere; 0 day' in 'Cstb knockout'genotype, growth condition, timeTranscriptome analysis of neurospheres derived from Cstb-KO mouse embryo brains during differentiation
Adjusted p-valueLog2-fold change
1.3492 × 10-21.8
Snord49b"chronic exposure to downstream water" vs "chronic exposure to control water"environmental history, generationToxicogenomic analysis in liver of mice exposed to polluted groundwater
Adjusted p-valueLog2-fold change
1.3708 × 10-3-1.7
Snord49b'IL-10 egfp/egfp' vs 'wild type genotype' in 'CD21hiCD24hi'genotype, phenotypeTranscription profiling by array to investigate how Aryl hydrocarbon receptor governs a transcriptional programme that determines regulatory B cell differentiation and function
Adjusted p-valueLog2-fold change
7.6016 × 10-31.7
Snord49b'induced extraembryonic endoderm stem cell; grown in ES cell medium' vs 'mouse embryonic fibroblast; control'cell type, growth conditionOSKM induce extraembryonic endoderm stem (iXEN) cells in parallel to iPS cells
Adjusted p-valueLog2-fold change
4.3445 × 10-21.7
Snord49b'undifferentiated' vs 'differentiated; rosiglitazone' in 'C57BL/6J'phenotype, stimulus, strainRNA-seq of mouse subcutaneous SVF cells before and after differentiation with a brown fat differentiation cocktail
Adjusted p-valueLog2-fold change
8.1651 × 10-5-1.5
Snord49b'swimming exercised for 6 weeks' vs 'sedentary control'treatmentMicroarray results from atrial tissue isolated from 6-week swimming exercised mice compared to sedentary controls
Adjusted p-valueLog2-fold change
9.4972 × 10-41.5
Snord49b'co-cultured with hematopoietic stem cell for 9 days' vs 'non co-cultured for 9 days' in 'stromal cell; expressing AKT1'cell type, growth condition, phenotypeTranscription profiling by high throughput sequencing of murine bone marrow endothelial cells and bone marrow stroma, in vitro and in vivo, with and without hematopoietic stem cells co-culture
Adjusted p-valueLog2-fold change
1.3298 × 10-21.5
Snord49b"chronic exposure to upstream water" vs "chronic exposure to control water"environmental history, generationToxicogenomic analysis in liver of mice exposed to polluted groundwater
Adjusted p-valueLog2-fold change
4.5077 × 10-2-1.5
Snord49b'12 day' vs '5 day' in 'doxycycline; 200 nanogram per milliliter; neoplasm'compound, phenotype, timeRNA-seq of doxycycline induced tumor and residual mouse primary mammary epithelial cells grown in 3D cell cultures against non-induced controls
Adjusted p-valueLog2-fold change
2.9822 × 10-4-1.4
Snord49b'Tbx5;Nkx2-5 knockout' vs 'wild type'genotypeTranscription profiling by array of tbx5, nkx2-5 or both transcription factor knockouts during early heart formation in mouse
Adjusted p-valueLog2-fold change
6.9927 × 10-31.4
Snord49b'postnatal 2-3 month; hindlimb' vs 'embryonic day 17.5; whole forelimb and hindlimb'age, organism partExpression data from skeletal muscle satellite cells at different development stages
Adjusted p-valueLog2-fold change
3.4063 × 10-2-1.4
Snord49b'neurosphere in differentiation medium; 5 day' vs 'neurosphere; 0 day' in 'Cstb knockout'genotype, growth condition, timeTranscriptome analysis of neurospheres derived from Cstb-KO mouse embryo brains during differentiation
Adjusted p-valueLog2-fold change
4.9067 × 10-21.4
Snord49b'extraembryonic endoderm stem cell; grown in ES cell medium' vs 'mouse embryonic fibroblast; control'cell type, growth conditionOSKM induce extraembryonic endoderm stem (iXEN) cells in parallel to iPS cells
Adjusted p-valueLog2-fold change
1.7502 × 10-21.3
Snord49b'Duchenne muscular dystrophy' vs 'normal'diseaseRNA-seq comparison of immortalised myoblasts from dystrophic and WT mice
Adjusted p-valueLog2-fold change
4.9995 × 10-4-1.2
Snord49b'Runx3 knockout' vs 'wild type genotype'genotypeRunx3 function in CD8+ splenic T cells
Adjusted p-valueLog2-fold change
7.1951 × 10-41.2
Snord49b'chronic cystitis' vs 'none' in 'C57/Bl6'disease, strainChronic cystitis microarray comparing C3H/HeN and C57BL/6 bladder gene expression
Adjusted p-valueLog2-fold change
1.2138 × 10-3-1.2
Snord49b'365 day' vs '1 day'ageTranscriptional profilling of female mice liver as a function of age
Adjusted p-valueLog2-fold change
8.7736 × 10-31.2
Snord49b'CpG ODN' vs 'PBS' at '4 hour'compound, timeTranscription profiling by array of mouse vaginal samples following adjuvant treatment
Adjusted p-valueLog2-fold change
2.1001 × 10-2-1.2
Snord49b'Tumor Necrosis Factor' vs 'none'stimulusTranscription profiling by high throughput sequencing of CD8 single positive thymocytes from F5 Rag1KO TCR transgenic mice stimulated with tumor necrosis factor
Adjusted p-valueLog2-fold change
2.2243 × 10-21.2
Snord49b'V6.5; embryonic stem cell’ vs 'wild type; endothelial'cell line, cell type, genotypeCD47 Inhibits Self-renewal and Reprogramming by Regulating c-Myc and Other Stem Cell Transcription Factors
Adjusted p-valueLog2-fold change
6.1048 × 10-6-1.1
Snord49b'90 day' vs '1 day'ageTranscriptional profilling of female mice liver as a function of age
Adjusted p-valueLog2-fold change
9.5933 × 10-6-1.1
Snord49b'Rag1-/-' vs 'wild type'genotypeTranscription profiling by array of peritoneal macrophages from B6 wild type and B6-Rag1 knock-out mice
Adjusted p-valueLog2-fold change
6.8316 × 10-3-1.1
Snord49b'5XFAD transgenic' vs 'wild type'genotypeTranscription profiling by array of microglia purified from wild type and TREM2 deficient microglia in a mouse model of Alzheimer's disease
Adjusted p-valueLog2-fold change
2.9087 × 10-21.1
Snord49b'CXCR4 overexpression' vs 'wild type'phenotypeTranscription profiling by array of resting memory OT-I T_CXCR4 or OT-I T_Control cells isolated from the spleen 90 days following DC vaccination
Adjusted p-valueLog2-fold change
1.7874 × 10-41
Snord49b'induced neural stem cell' vs 'mouse embryonic fibroblast cell'cell typeGene expression profile of mouse induced neural stem cells
Adjusted p-valueLog2-fold change
8.1409 × 10-41
Snord49b'CpG ODN' vs 'PBS' at '48 hour'compound, timeTranscription profiling by array of mouse vaginal samples following adjuvant treatment
Adjusted p-valueLog2-fold change
4.5615 × 10-21
Snord49b'prostaglandin E2; 1 micromolar' vs 'none' in 'primary cell line; wild type genotype'cell line, compound, genotypeBulk RNA-seq of wild type and MEF2A or MEF2C/D knockout mouse bone marrow macrophages under different stimulation conditions