ENSMUSG00000116733 (6330408M09Rik)

mus musculus

RIKEN cDNA 6330408M09 gene

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Mus musculus
Organism part
Showing 37 experiments:
Created with Highcharts 6.2.0adrenal glandbraincolondiencephaloneyeball of camera-type eyehypothalamusmedial prefrontal cortexolfactory epitheliumsaliva-secreting glandstriatumvomeronasal organblood plasmacaecumcortex of kidneyembryonic tissueheartkidneymuscle (biceps femoris)pituitary glandsmall intestinethymuszone of skin
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9 in 3 strains - CD1
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9 in 3 strains - DBA/2J
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9 in 3 strains - C57BL/6
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9
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Mammalian Kaessmann
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6
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Vertebrates
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49 FANTOM5 project - embryonic day 18
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49 FANTOM5 project - embryonic day 15
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4
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4 Bonthuis et al - CastEiJ
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4 Bonthuis et al - (C57BL/6J X …
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49 FANTOM5 project - embryonic day 14
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3 Soumillon et al
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Gregg et al - CAST/EiJ
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Gregg et al - (CAST/EiJ X C57BL/6J)F1
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Gregg et al - (C57BL/6J X CAST/EiJ)F1
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4 Bonthuis et al - (CastEiJ X …
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Mernberger et al 2019 - Organism Part
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Developing gut
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49 FANTOM5 project - embryonic day 17
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49 FANTOM5 project - embryonic day 16
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2
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Gregg et al - C57BL/6J
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49 FANTOM5 project - neonate
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49 FANTOM5 project - juvenile
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49 FANTOM5 project - embryonic day 13
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3
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4 Bonthuis et al - Idaho derived wild …
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4 Bonthuis et al - C57BL/6J
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Organism part - Huttlin et al
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Organism part - Geiger et al
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Organism part - Malmstrom et al - , …
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Huttlin et al., 2010 - tissues - brain, …
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Organism part - Malmstrom et al - …
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Organism part - Malmstrom et al - , …
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Duda et al., 2018 - organism part - …
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Proteomics
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Transcriptomics
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Kingdom
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Experimental variables
Regulation
-1.1
-1.4
1.4
4.6
Display log2-fold change
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
2.6651 × 10-54.6
6330408M09Rik'brown adipose tissue' vs 'white adipose tissue' in 'chow; 23 degree celsius'diet, organism part, temperatureRNA-seq of brown and white mouse adipose tissue at thermoneutrality and high-fat diet
Adjusted p-valueLog2-fold change
1.1056 × 10-21.7
6330408M09Rik'CpG; 6 hour' vs 'none; 0 hour' in 'SMRT shRNA'RNA interference, stimulus, timeRNA-seq of Control and SMRT KD CD8α+ DCs at 0hr and 6hr CpG stimulation
Adjusted p-valueLog2-fold change
2.4919 × 10-21.7
6330408M09Rik'LDB1 knock-down with Ldb1 delta 4/5 construct' vs 'control shRNA'RNA interferenceRole of LDB1 in the transition from chromatin looping to transcription activation
Adjusted p-valueLog2-fold change
2.2193 × 10-21.5
6330408M09Rik'SGC-CBP30; 10 nanogram per milliliter' vs 'none' in 'primary cell line; wild type genotype'cell line, compound, genotypeBulk RNA-seq of wild type and MEF2A or MEF2C/D knockout mouse bone marrow macrophages under different stimulation conditions
Adjusted p-valueLog2-fold change
1.0789 × 10-3-1.4
6330408M09Rik'high fat diet' vs 'normal chow' in '28 week; ReverbαFlox2-6AdipoCre+'age, diet, genotypeTissue-autonomous regulation of adipose expansion by core clock protein REVERBα
Adjusted p-valueLog2-fold change
1.7411 × 10-31.4
6330408M09Rik'Tumor Necrosis Factor' vs 'none'stimulusTranscription profiling by high throughput sequencing of CD8 single positive thymocytes from F5 Rag1KO TCR transgenic mice stimulated with tumor necrosis factor
Adjusted p-valueLog2-fold change
5.8358 × 10-3-1.4
6330408M09Rik'lipopolysaccharide; 10 nanogram per milliliter' vs 'none' in 'primary cell line; wild type genotype'cell line, compound, genotypeBulk RNA-seq of wild type and MEF2A or MEF2C/D knockout mouse bone marrow macrophages under different stimulation conditions
Adjusted p-valueLog2-fold change
1.0498 × 10-2-1.4
6330408M09Rik'high fat diet' vs 'normal chow' in '28 week; ReverbαFlox2-6AdipoCre-'age, diet, genotypeTissue-autonomous regulation of adipose expansion by core clock protein REVERBα
Adjusted p-valueLog2-fold change
4.2099 × 10-21.4
6330408M09Rik'brown adipose tissue' vs 'white adipose tissue' in 'high fat diet; 30 degree celsius'diet, organism part, temperatureRNA-seq of brown and white mouse adipose tissue at thermoneutrality and high-fat diet
Adjusted p-valueLog2-fold change
4.1731 × 10-2-1.3
6330408M09Rik'undifferentiated' vs 'differentiated; rosiglitazone' in 'A/J'phenotype, stimulus, strainRNA-seq of mouse subcutaneous SVF cells before and after differentiation with a brown fat differentiation cocktail
Adjusted p-valueLog2-fold change
1.5905 × 10-2-1.2
6330408M09Rik'lipopolysaccharide; 10 nanogram per milliliter and prostaglandin E2; 1 micromolar' vs 'none' in 'primary cell line; wild type genotype'cell line, compound, genotypeBulk RNA-seq of wild type and MEF2A or MEF2C/D knockout mouse bone marrow macrophages under different stimulation conditions
Adjusted p-valueLog2-fold change
2.1365 × 10-2-1.2
6330408M09Rik'SARS coronavirus MA15; 4 day' vs 'mock' in 'PWK/PhJ'infect, strain, timeGenomic profiling of collaborative cross founder mouse strains infected with respiratory viruses to discover novel transcripts and infection-related strain-specific gene and isoform expression
Adjusted p-valueLog2-fold change
2.1917 × 10-2-1.2
6330408M09Rik'undifferentiated' vs 'differentiated; rosiglitazone' in 'AKR/J'phenotype, stimulus, strainRNA-seq of mouse subcutaneous SVF cells before and after differentiation with a brown fat differentiation cocktail
Adjusted p-valueLog2-fold change
6.0761 × 10-5-1.1
6330408M09Rik'Nrl-/-' vs 'wild type'genotypeNext Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Nrl-/- Retinal Transcriptomes
Adjusted p-valueLog2-fold change
3.4136 × 10-2-1.1
6330408M09Rik'wormy, worm left; Trichuris muris' vs 'control; non wormy' in 'caecum'environmental stress, infect, organism partRNA-seq of mouse intestinal mucosa to investigate infection by the parasitic nematode Trichuris muris
Synonym
Gm49623
Ensembl gene
Ensembl transcript
MGI ID (Mouse)
MGI description
Gene biotype
Design element
4330590, 5100837, 5003880