EMD-14122
TIR-SAVED effector bound to cA3
EMD-14122
Single-particle3.8 Å

Map released: 15/06/2022
Last modified: 17/07/2024
Sample Organism:
Microbacterium ketosireducens
Sample: one tier of TIR_SAVED bound to cA3
Fitted models: 7qqk (Avg. Q-score: 0.405)
Raw data: EMPIAR-11686
Deposition Authors: Spagnolo L
,
White MF
,
Hogrel G
Sample: one tier of TIR_SAVED bound to cA3
Fitted models: 7qqk (Avg. Q-score: 0.405)
Raw data: EMPIAR-11686
Deposition Authors: Spagnolo L



Cyclic nucleotide-induced helical structure activates a TIR immune effector.
Hogrel G
,
Guild A
,
Graham S
,
Rickman H,
Gruschow S,
Bertrand Q
,
Spagnolo L
,
White MF
(2022) Nature , 608 , 808 - 812






(2022) Nature , 608 , 808 - 812
Abstract:
Cyclic nucleotide signalling is a key component of antiviral defence in all domains of life. Viral detection activates a nucleotide cyclase to generate a second messenger, resulting in activation of effector proteins. This is exemplified by the metazoan cGAS-STING innate immunity pathway1, which originated in bacteria2. These defence systems require a sensor domain to bind the cyclic nucleotide and are often coupled with an effector domain that, when activated, causes cell death by destroying essential biomolecules3. One example is the Toll/interleukin-1 receptor (TIR) domain, which degrades the essential cofactor NAD+ when activated in response to infection in plants and bacteria2,4,5 or during programmed nerve cell death6. Here we show that a bacterial antiviral defence system generates a cyclic tri-adenylate that binds to a TIR-SAVED effector, acting as the 'glue' to allow assembly of an extended superhelical solenoid structure. Adjacent TIR subunits interact to organize and complete a composite active site, allowing NAD+ degradation. Activation requires extended filament formation, both in vitro and in vivo. Our study highlights an example of large-scale molecular assembly controlled by cyclic nucleotides and reveals key details of the mechanism of TIR enzyme activation.
Cyclic nucleotide signalling is a key component of antiviral defence in all domains of life. Viral detection activates a nucleotide cyclase to generate a second messenger, resulting in activation of effector proteins. This is exemplified by the metazoan cGAS-STING innate immunity pathway1, which originated in bacteria2. These defence systems require a sensor domain to bind the cyclic nucleotide and are often coupled with an effector domain that, when activated, causes cell death by destroying essential biomolecules3. One example is the Toll/interleukin-1 receptor (TIR) domain, which degrades the essential cofactor NAD+ when activated in response to infection in plants and bacteria2,4,5 or during programmed nerve cell death6. Here we show that a bacterial antiviral defence system generates a cyclic tri-adenylate that binds to a TIR-SAVED effector, acting as the 'glue' to allow assembly of an extended superhelical solenoid structure. Adjacent TIR subunits interact to organize and complete a composite active site, allowing NAD+ degradation. Activation requires extended filament formation, both in vitro and in vivo. Our study highlights an example of large-scale molecular assembly controlled by cyclic nucleotides and reveals key details of the mechanism of TIR enzyme activation.