EMD-15901

Single-particle
15.4 Å
EMD-15901 Deposition: 03/10/2022
Map released: 02/08/2023
Last modified: 11/10/2023
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-15901

Cryo-EM map of Zebrafish (Danio rerio) Cardiac Thin Filament

EMD-15901

Single-particle
15.4 Å
EMD-15901 Deposition: 03/10/2022
Map released: 02/08/2023
Last modified: 11/10/2023
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Danio rerio
Sample: Cardiac Thin Filament

Deposition Authors: Bradshaw M , Paul DM
Zebrafish as a model for cardiac disease; Cryo-EM structure of native cardiac thin filaments from Danio Rerio.
Bradshaw M , Squire JM , Morris E , Atkinson G , Richardson R , Lees J , Caputo M , Bigotti GM , Paul DM
(2023) J.Muscle Res.Cell.Motil. , 44 , 179 - 192
PUBMED: 37480427
DOI: doi:10.1007/s10974-023-09653-5
ISSN: 0142-4319
Abstract:
Actin, tropomyosin and troponin, the proteins that comprise the contractile apparatus of the cardiac thin filament, are highly conserved across species. We have used cryo-EM to study the three-dimensional structure of the zebrafish cardiac thin and actin filaments. With 70% of human genes having an obvious zebrafish orthologue, and conservation of 85% of disease-causing genes, zebrafish are a good animal model for the study of human disease. Our structure of the zebrafish thin filament reveals the molecular interactions between the constituent proteins, showing that the fundamental organisation of the complex is the same as that reported in the human reconstituted thin filament. A reconstruction of zebrafish cardiac F-actin demonstrates no deviations from human cardiac actin over an extended length of 14 actin subunits. Modelling zebrafish homology models into our maps enabled us to compare, in detail, the similarity with human models. The structural similarities of troponin-T in particular, a region known to contain a hypertrophic cardiomyopathy 'hotspot', confirm the suitability of zebrafish to study these disease-causing mutations.