EMD-1674

Single-particle
6.0 Å
EMD-1674 Deposition: 06/01/2010
Map released: 19/10/2010
Last modified: 23/12/2011
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-1674

The cryo-EM structure of actin filament in the presence of phosphate

EMD-1674

Single-particle
6.0 Å
EMD-1674 Deposition: 06/01/2010
Map released: 19/10/2010
Last modified: 23/12/2011
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Oryctolagus cuniculus
Sample: Actin filament in the presence of phosphate
Fitted models: 3g37 (Avg. Q-score: 0.066)

Deposition Authors: Murakami K, Yasunaga T, Noguchi TQ, Uyeda TQ, Wakabayashi T
Structural basis for actin assembly, activation of ATP hydrolysis, and delayed phosphate release.
Murakami K , Yasunaga T , Noguchi TQ, Gomibuchi Y, Ngo KX , Uyeda TQ, Wakabayashi T
(2010) Cell , 143 , 275 - 287
Abstract:
Assembled actin filaments support cellular signaling, intracellular trafficking, and cytokinesis. ATP hydrolysis triggered by actin assembly provides the structural cues for filament turnover in vivo. Here, we present the cryo-electron microscopic (cryo-EM) structure of filamentous actin (F-actin) in the presence of phosphate, with the visualization of some α-helical backbones and large side chains. A complete atomic model based on the EM map identified intermolecular interactions mediated by bound magnesium and phosphate ions. Comparison of the F-actin model with G-actin monomer crystal structures reveals a critical role for bending of the conserved proline-rich loop in triggering phosphate release following ATP hydrolysis. Crystal structures of G-actin show that mutations in this loop trap the catalytic site in two intermediate states of the ATPase cycle. The combined structural information allows us to propose a detailed molecular mechanism for the biochemical events, including actin polymerization and ATPase activation, critical for actin filament dynamics.