EMD-20678

Single-particle
4.0 Å
EMD-20678 Deposition: 04/09/2019
Map released: 16/10/2019
Last modified: 20/03/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-20678

Apo full-length rat TRPV2 in nanodiscs, state 2

EMD-20678

Single-particle
4.0 Å
EMD-20678 Deposition: 04/09/2019
Map released: 16/10/2019
Last modified: 20/03/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Rattus norvegicus
Sample: Homotetramer of rat TRPV2
Fitted models: 6u86 (Avg. Q-score: 0.435)

Deposition Authors: Pumroy RA , Moiseenkova-Bell VY
Molecular mechanism of TRPV2 channel modulation by cannabidiol.
PUBMED: 31566564
DOI: doi:10.7554/eLife.48792
ISSN: 2050-084X
Abstract:
Transient receptor potential vanilloid 2 (TRPV2) plays a critical role in neuronal development, cardiac function, immunity, and cancer. Cannabidiol (CBD), the non-psychotropic therapeutically active ingredient of Cannabis sativa, is an activator of TRPV2 and also modulates other transient receptor potential (TRP) channels. Here, we determined structures of the full-length rat TRPV2 channel in apo and CBD-bound states in nanodiscs by cryo-electron microscopy. We show that CBD interacts with TRPV2 through a hydrophobic pocket located between S5 and S6 helices of adjacent subunits, which differs from known ligand and lipid binding sites in other TRP channels. CBD-bound TRPV2 structures revealed that the S4-S5 linker plays a critical role in channel gating upon CBD binding. Additionally, nanodiscs permitted us to visualize two distinct TRPV2 apo states in a lipid environment. Together these results provide a foundation to further understand TRPV channel gating, their divergent physiological functions, and to accelerate structure-based drug design.