EMD-22422

Single-particle
3.2 Å
EMD-22422 Deposition: 09/08/2020
Map released: 09/12/2020
Last modified: 20/11/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
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EMD-22422

Structure of an endocytic receptor

EMD-22422

Single-particle
3.2 Å
EMD-22422 Deposition: 09/08/2020
Map released: 09/12/2020
Last modified: 20/11/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Homo sapiens
Sample: Lymphocyte antigen 75, DEC205, CD205
Fitted models: 7jpt (Avg. Q-score: 0.456)

Deposition Authors: Gully BS , Rossjohn J
The cryo-EM structure of the endocytic receptor DEC-205.
Gully BS , Venugopal H , Fulcher AJ, Fu Z, Li J, Deuss FA , Llerena C, Heath WR , Lahoud MH , Caminschi I , Rossjohn J , Berry R
(2020) J Biol Chem , 296 , 100127 - 100127
PUBMED: 33257321
DOI: doi:10.1074/jbc.RA120.016451
ISSN: 1083-351X
ASTM: JBCHA3
Abstract:
DEC-205 (CD205), a member of the macrophage mannose receptor protein family, is the prototypic endocytic receptor of dendritic cells, whose ligands include phosphorothioated cytosine-guanosine oligonucleotides, a motif often seen in bacterial or viral DNA. However, despite growing biological and clinical significance, little is known about the structural arrangement of this receptor or any of its family members. Here, we describe the 3.2 Å cryo-EM structure of human DEC-205, thereby illuminating the structure of the mannose receptor protein family. The DEC-205 monomer forms a compact structure comprising two intercalated rings of C-type lectin-like domains, where the N-terminal cysteine-rich and fibronectin domains reside at the central intersection. We establish a pH-dependent oligomerization pathway forming tetrameric DEC-205 using solution-based techniques and ultimately solved the 4.9 Å cryo-EM structure of the DEC-205 tetramer to identify the unfurling of the second lectin ring which enables tetramer formation. Furthermore, we suggest the relevance of this oligomerization pathway within a cellular setting, whereby cytosine-guanosine binding appeared to disrupt this cell-surface oligomer. Accordingly, we provide insight into the structure and oligomeric assembly of the DEC-205 receptor.