EMD-31329

Single-particle
2.5 Å
EMD-31329 Deposition: 21/05/2021
Map released: 11/08/2021
Last modified: 13/11/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-31329

Cryo-EM structure of the compound 2-bound human GLP-1 receptor-Gs complex

EMD-31329

Single-particle
2.5 Å
EMD-31329 Deposition: 21/05/2021
Map released: 11/08/2021
Last modified: 13/11/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Homo sapiens, synthetic construct, Rattus norvegicus, Bos taurus
Sample: Cryo-EM structure of the compound 2-bound human GLP-1 receptor-Gs complex
Fitted models: 7evm (Avg. Q-score: 0.481)

Deposition Authors: Cong Z, Chen L
Molecular insights into ago-allosteric modulation of the human glucagon-like peptide-1 receptor.
Cong Z, Chen LN, Ma H, Zhou Q, Zou X, Ye C, Dai A, Liu Q , Huang W , Sun X, Wang X, Xu P , Zhao L, Xia T, Zhong W, Yang D , Eric Xu H , Zhang Y , Wang MW
(2021) Nat Commun , 12 , 3763 - 3763
PUBMED: 34145245
DOI: doi:10.1038/s41467-021-24058-z
ISSN: 2041-1723
Abstract:
The glucagon-like peptide-1 (GLP-1) receptor is a validated drug target for metabolic disorders. Ago-allosteric modulators are capable of acting both as agonists on their own and as efficacy enhancers of orthosteric ligands. However, the molecular details of ago-allosterism remain elusive. Here, we report three cryo-electron microscopy structures of GLP-1R bound to (i) compound 2 (an ago-allosteric modulator); (ii) compound 2 and GLP-1; and (iii) compound 2 and LY3502970 (a small molecule agonist), all in complex with heterotrimeric Gs. The structures reveal that compound 2 is covalently bonded to C347 at the cytoplasmic end of TM6 and triggers its outward movement in cooperation with the ECD whose N terminus penetrates into the GLP-1 binding site. This allows compound 2 to execute positive allosteric modulation through enhancement of both agonist binding and G protein coupling. Our findings offer insights into the structural basis of ago-allosterism at GLP-1R and may aid the design of better therapeutics.