EMD-32863

Single-particle
3.38 Å
EMD-32863 Deposition: 12/02/2022
Map released: 22/02/2023
Last modified: 11/10/2023
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-32863

CalA3_modular PKS_KS-AT-DH-KR

EMD-32863

Single-particle
3.38 Å
EMD-32863 Deposition: 12/02/2022
Map released: 22/02/2023
Last modified: 11/10/2023
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Streptomyces chartreusis NRRL 3882
Sample: an assembly-line polyketide synthase module containing KS-AT-DH-KR domains
Fitted models: 7wvz (Avg. Q-score: 0.46)

Deposition Authors: Wang J , Wang Z
C-N bond formation by a polyketide synthase.
Wang J , Wang X, Li X, Kong L, Du Z , Li D , Gou L, Wu H, Cao W, Wang X, Lin S , Shi T , Deng Z , Wang Z , Liang J
(2023) Nat Commun , 14 , 1319 - 1319
PUBMED: 36899013
DOI: doi:10.1038/s41467-023-36989-w
ISSN: 2041-1723
Abstract:
Assembly-line polyketide synthases (PKSs) are molecular factories that produce diverse metabolites with wide-ranging biological activities. PKSs usually work by constructing and modifying the polyketide backbone successively. Here, we present the cryo-EM structure of CalA3, a chain release PKS module without an ACP domain, and its structures with amidation or hydrolysis products. The domain organization reveals a unique "∞"-shaped dimeric architecture with five connected domains. The catalytic region tightly contacts the structural region, resulting in two stabilized chambers with nearly perfect symmetry while the N-terminal docking domain is flexible. The structures of the ketosynthase (KS) domain illustrate how the conserved key residues that canonically catalyze C-C bond formation can be tweaked to mediate C-N bond formation, revealing the engineering adaptability of assembly-line polyketide synthases for the production of novel pharmaceutical agents.