EMD-9570

Single-particle
3.3 Å
EMD-9570 Deposition: 11/10/2016
Map released: 07/12/2016
Last modified: 13/11/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-9570

C. elegans INX-6 gap junction hemichannel

EMD-9570

Single-particle
3.3 Å
EMD-9570 Deposition: 11/10/2016
Map released: 07/12/2016
Last modified: 13/11/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Caenorhabditis elegans
Sample: INX-6
Fitted models: 5h1q (Avg. Q-score: 0.45)

Deposition Authors: Oshima A , Tani K , Fujiyoshi Y
Atomic structure of the innexin-6 gap junction channel determined by cryo-EM
Oshima A , Tani K , Fujiyoshi Y
(2016) Nat Commun , 7 , 13681 - 13681
PUBMED: 27905396
DOI: doi:10.1038/ncomms13681
ISSN: 2041-1723
Abstract:
Innexins, a large protein family comprising invertebrate gap junction channels, play an essential role in nervous system development and electrical synapse formation. Here we report the cryo-electron microscopy structures of Caenorhabditis elegans innexin-6 (INX-6) gap junction channels at atomic resolution. We find that the arrangements of the transmembrane helices and extracellular loops of the INX-6 monomeric structure are highly similar to those of connexin-26 (Cx26), despite the lack of significant sequence similarity. The INX-6 gap junction channel comprises hexadecameric subunits but reveals the N-terminal pore funnel, consistent with Cx26. The helix-rich cytoplasmic loop and C-terminus are intercalated one-by-one through an octameric hemichannel, forming a dome-like entrance that interacts with N-terminal loops in the pore. These observations suggest that the INX-6 cytoplasmic domains are cooperatively associated with the N-terminal funnel conformation, and an essential linkage of the N-terminal with channel activity is presumably preserved across gap junction families.