EMD-23011

Single-particle
3.5 Å
EMD-23011 Deposition: 20/11/2020
Map released: 24/03/2021
Last modified: 13/11/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-23011

Structural impact on SARS-CoV-2 spike protein by D614G substitution

EMD-23011

Single-particle
3.5 Å
EMD-23011 Deposition: 20/11/2020
Map released: 24/03/2021
Last modified: 13/11/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Severe acute respiratory syndrome coronavirus 2
Sample: open state( one RBD up) of pre-fusion SARS-CoV-2 D614G mutant spike glycoprotein
Fitted models: 7krr (Avg. Q-score: 0.401)

Deposition Authors: Zhang J , Cai YF
Structural impact on SARS-CoV-2 spike protein by D614G substitution.
Zhang J , Cai Y , Xiao T , Lu J, Peng H , Sterling SM , Walsh Jr RM , Rits-Volloch S, Zhu H , Woosley AN, Yang W , Sliz P , Chen B
(2021) Science , 372 , 525 - 530
PUBMED: 33727252
DOI: doi:10.1126/science.abf2303
ISSN: 1095-9203
ASTM: SCIEAS
Abstract:
Substitution for aspartic acid (D) by glycine (G) at position 614 in the spike (S) protein of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) appears to facilitate rapid viral spread. The G614 strain and its recent variants are now the dominant circulating forms. Here, we report cryo-electron microscopy structures of a full-length G614 S trimer, which adopts three distinct prefusion conformations that differ primarily by the position of one receptor-binding domain. A loop disordered in the D614 S trimer wedges between domains within a protomer in the G614 spike. This added interaction appears to prevent premature dissociation of the G614 trimer-effectively increasing the number of functional spikes and enhancing infectivity-and to modulate structural rearrangements for membrane fusion. These findings extend our understanding of viral entry and suggest an improved immunogen for vaccine development.