EMD-25849

Single-particle
7.51 Å
EMD-25849 Deposition: 05/01/2022
Map released: 02/03/2022
Last modified: 30/10/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-25849

Cryo-EM structure of GluN1b-2B NMDAR in complex with Fab5 active conformation

EMD-25849

Single-particle
7.51 Å
EMD-25849 Deposition: 05/01/2022
Map released: 02/03/2022
Last modified: 30/10/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Sample Organism: Rattus norvegicus, Mus musculus
Sample: GluN1b-2B NMDAR complexed to Fab5
Fitted models: 7teq (Avg. Q-score: 0.169)

Deposition Authors: Tajima N , Furukawa H
Development and characterization of functional antibodies targeting NMDA receptors.
Tajima N , Simorowski N, Yovanno RA , Regan MC, Michalski K, Gomez R , Lau AY , Furukawa H
(2022) Nat Commun , 13 , 923 - 923
PUBMED: 35177668
DOI: doi:10.1038/s41467-022-28559-3
ISSN: 2041-1723
Abstract:
N-methyl-D-aspartate receptors (NMDARs) are critically involved in basic brain functions and neurodegeneration as well as tumor invasiveness. Targeting specific subtypes of NMDARs with distinct activities has been considered an effective therapeutic strategy for neurological disorders and diseases. However, complete elimination of off-target effects of small chemical compounds has been challenging and thus, there is a need to explore alternative strategies for targeting NMDAR subtypes. Here we report identification of a functional antibody that specifically targets the GluN1-GluN2B NMDAR subtype and allosterically down-regulates ion channel activity as assessed by electrophysiology. Through biochemical analysis, x-ray crystallography, single-particle electron cryomicroscopy, and molecular dynamics simulations, we show that this inhibitory antibody recognizes the amino terminal domain of the GluN2B subunit and increases the population of the non-active conformational state. The current study demonstrates that antibodies may serve as specific reagents to regulate NMDAR functions for basic research and therapeutic objectives.