EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"Synaptic vesicle glycoprotein 2A"

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EMDB [14]

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EMD-36398

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Cryo-EM structure of SV2A dimer in complex levetiracetam

Release date: May 1, 2024
Resolution: 3.38 Å
EM Method: Single-particle
Fitted PDBs: 8jli
Q-score: 0.351

Yamagata A, Ito K, Suzuki T, Dohmae N, Terada T, Shirouzu M

Nat Commun (2024) 15 pp. 3027-3027 [ Pubmed: 38637505 DOI: doi:10.1038/s41467-024-47322-4 ]

Sample:

Sv2a dimer in complex with anti-epileptic drug, levetiracetam (Complex from Homo sapiens)
(2s)-2-(2-oxidanylidenepyrrolidin-1-yl)butanamide (170 Da, Ligand)
Synaptic vesicle glycoprotein 2a (83 kDa, Protein from Homo sapiens)

EMD-36616

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Cryo-EM structure of SV2A in complex with BoNT/A2 Hc and levetiracetam

Release date: May 1, 2024
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 8js8
Q-score: 0.54

Yamagata A, Ito K, Suzuki T, Dohmae N, Terada T, Shirouzu M

Nat Commun (2024) 15 pp. 3027-3027 [ Pubmed: 38637505 DOI: doi:10.1038/s41467-024-47322-4 ]

Sample:

Sv2a in complex with bont/a2 hc domain and anti-epileptic drug, levetiracetam (Complex from Homo sapiens)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Botulinum neurotoxin (49 kDa, Protein from Clostridium botulinum)
Synaptic vesicle glycoprotein 2a (83 kDa, Protein from Homo sapiens)
(2s)-2-(2-oxidanylidenepyrrolidin-1-yl)butanamide (170 Da, Ligand)

[Show more]

EMD-36617

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Cryo-EM structure of SV2A in complex with BoNT/A2 Hc

Release date: May 1, 2024
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 8js9
Q-score: 0.54

Yamagata A, Ito K, Suzuki T, Dohmae N, Terada T, Shirouzu M

Nat Commun (2024) 15 pp. 3027-3027 [ Pubmed: 38637505 DOI: doi:10.1038/s41467-024-47322-4 ]

Sample:

Synaptic vesicle glycoprotein 2a (83 kDa, Protein from Homo sapiens)
Sv2a in complex with bont/a2 hc (Complex from Homo sapiens)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Botulinum neurotoxin (49 kDa, Protein from Clostridium botulinum)

[Show more]

EMD-36935

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Cryo-EM structure of SV2A in complex with BoNT/A2 Hc and brivaracetam

Release date: May 1, 2024
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 8k77
Q-score: 0.477

Yamagata A, Ito K, Suzuki T, Dohmae N, Terada T, Shirouzu M

Nat Commun (2024) 15 pp. 3027-3027 [ Pubmed: 38637505 DOI: doi:10.1038/s41467-024-47322-4 ]

Sample:

2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
(2s)-2-[(4r)-2-oxidanylidene-4-propyl-pyrrolidin-1-yl]butanamide (212 Da, Ligand)
Synaptic vesicle glycroprotein 2a in complex with brivaracetam and botulinum neurotoxin a2 hc domain (Complex from Homo sapiens)
Botulinum neurotoxin (49 kDa, Protein from Clostridium botulinum)
Synaptic vesicle glycoprotein 2a (83 kDa, Protein from Homo sapiens)

[Show more]

Sort by: Download

Showing 11 - 14 of 14. Page 2 of 2

Display: Statistics

Download

Select database:

EMDB [14]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: