Cryo-EM structure of the human Ebp1 - 80S ribosome
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7bhp
Q-score: 0.439
Bhaskar V, Desogus J, Graff-Meyer A, Schenk AD, Cavadini S, Chao JA
RNA (2021) 27 pp. 411-419 [ Pubmed: 33479117 DOI: doi:10.1261/rna.077602.120 ]
- 5.8s ribosomal rna (50 kDa, RNA from Homo sapiens)
- 60s ribosomal protein l39 (6 kDa, Protein from Human)
- 60s ribosomal protein l4 (47 kDa, Protein from Human)
- 28s ribosomal rna (1 MDa, RNA from Homo sapiens)
- 60s ribosomal protein l10-like (24 kDa, Protein from Human)
- Complex of human ebp1 and 80s ribosome (Complex from Homo sapiens)
- 60s ribosomal protein l9 (21 kDa, Protein from Human)
- 60s ribosomal protein l30 (12 kDa, Protein from Human)
- Proliferation-associated protein 2g4 (43 kDa, Protein from Human)
- Poly gc double helix strand modeled for es27l density next to ebp1 density (11 kDa, RNA from Homo sapiens)
- 60s ribosomal protein l8 (28 kDa, Protein from Human)
- 60s ribosomal protein l35 (14 kDa, Protein from Human)
- 60s ribosomal protein l24 (17 kDa, Protein from Human)
- 60s ribosomal protein l3 (46 kDa, Protein from Human)
- 60s ribosomal protein l29 (17 kDa, Protein from Human)
- 60s ribosomal protein l31 (14 kDa, Protein from Human)
- 60s ribosomal protein l6 (32 kDa, Protein from Human)
- 60s ribosomal protein l36a (12 kDa, Protein from Human)
- 60s ribosomal protein l34 (13 kDa, Protein from Human)
- 60s ribosomal protein l36 (12 kDa, Protein from Human)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l11 (20 kDa, Protein from Human)
- 60s ribosomal protein l13a (23 kDa, Protein from Human)
- 60s ribosomal protein l5 (34 kDa, Protein from Human)
- 60s ribosomal protein l15 (24 kDa, Protein from Human)
- 5s ribosomal rna (38 kDa, RNA from Homo sapiens)
- 60s ribosomal protein l23a (17 kDa, Protein from Human)
- 60s ribosomal protein l27 (15 kDa, Protein from Human)
- 60s ribosomal protein l7a (30 kDa, Protein from Human)
- Water (18 Da, Ligand)
- 60s ribosomal protein l26 (17 kDa, Protein from Human)
- 60s ribosomal protein l18 (21 kDa, Protein from Human)
- 60s ribosomal protein l32 (15 kDa, Protein from Human)
- 60s ribosomal protein l37a (10 kDa, Protein from Human)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l18a (20 kDa, Protein from Human)
- 60s ribosomal protein l21 (18 kDa, Protein from Human)
- 60s ribosomal protein l14 (23 kDa, Protein from Human)
- 60s ribosomal protein l22 (14 kDa, Protein from Human)
- 60s ribosomal protein l17 (21 kDa, Protein from Human)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Human)
- 60s ribosomal protein l7 (29 kDa, Protein from Human)
- 60s ribosomal protein l13 (24 kDa, Protein from Human)
- 60s ribosomal protein l35a (12 kDa, Protein from Human)
- 60s ribosomal protein l28 (15 kDa, Protein from Human)
- 60s ribosomal protein l19 (23 kDa, Protein from Human)
- 60s ribosomal protein l27a (16 kDa, Protein from Human)
- 60s ribosomal protein l37 (11 kDa, Protein from Human)
- 60s ribosomal protein l38 (8 kDa, Protein from Human)