Cryo-EM of tri-pilus from S. islandicus REY15A
Resolution: 3.47 Å
EM Method: Helical reconstruction
Fitted PDBs: 8tib
Q-score: 0.523
Eastep GN, Liu J, Rich-New ST, Egelman EH, Krupovic M, Wang F
To Be Published
- Tri-pilus (Complex from Sulfolobus islandicus REY15A)
- Duf973 family protein (14 kDa, Protein from Sulfolobus islandicus REY15A)
Cryo-EM of mono-pilus from S. islandicus REY15A
Resolution: 3.89 Å
EM Method: Helical reconstruction
Fitted PDBs: 8tif
Q-score: 0.477
Liu J, Eastep GN, Cvirkaite-Krupovic V, Rich-New ST, Kreutzberger M, Egelman EH, Krupovic M, Wang F
To Be Published
- Duf973 family protein (14 kDa, Protein from Sulfolobus islandicus REY15A)
- Mono-pilus (Complex from Sulfolobus islandicus REY15A)
Extracellular filaments of Pyrobaculum calidifontis
Baquero DP, Cvirkaite-Krupovic V, Hu SS, Fields JL, Liu X, Rensing C, Egelman EH, Krupovic M, Wang F
Cell (2023) 186 pp. 2853-2864.e8 [ Pubmed: 37290436 DOI: 10.1016/j.cell.2023.05.012 ]
Image sets:
Cryo-EM structure of Natrinema sp. J7-2 Type IV pilus
Resolution: 3.0 Å
EM Method: Helical reconstruction
Fitted PDBs: 8gi2
Q-score: 0.543
Kreutzberger MAB, Cvirkaite-Krupovic V, Liu Y, Baquero DP, Liu J, Sonani RR, Calladine CR, Wang F, Krupovic M, Egelman EH
PNAS (2023) 120 pp. e2304256120-e2304256120 [ DOI: doi:10.1073/pnas.2304256120 Pubmed: 37399404 ]
- Natrinema pilin, orf10 (17 kDa, Protein from Natrinema sp. J7-2)
- Type iv pili (Complex from Natrinema sp. J7-2)
Cryo-EM micrographs of AvECN cytochrome nanowires
Baquero DP, Cvirkaite-Krupovic V, Hu SS, Fields JL, Liu X, Rensing C, Egelman EH, Krupovic M, Wang F
Cell (2023) 186 pp. 2853-2864.e8 [ Pubmed: 37290436 DOI: 10.1016/j.cell.2023.05.012 ]
Image sets:
Structure of the Haloferax volcanii archaeal type IV pilus
Resolution: 2.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 8fj5
Q-score: 0.612
Kreutzberger MAB, Cvirkaite-Krupovic V, Liu Y, Baquero DP, Liu J, Sonani RR, Calladine CR, Wang F, Krupovic M, Egelman EH
PNAS (2023) 120 pp. e2304256120-e2304256120 [ Pubmed: 37399404 DOI: doi:10.1073/pnas.2304256120 ]
Structure of the Saccharolobus solfataricus archaeal type IV pilus at 3 Angstrom resolution
Resolution: 3.0 Å
EM Method: Helical reconstruction
Fitted PDBs: 8fjs
Q-score: 0.573
Kreutzberger MAB, Cvirkaite-Krupovic V, Liu Y, Baquero DP, Liu J, Sonani RR, Calladine CR, Wang F, Krupovic M, Egelman EH
PNAS (2023) 120 pp. e2304256120-e2304256120 [ DOI: doi:10.1073/pnas.2304256120 Pubmed: 37399404 ]
Asymmetric cryo-EM structure of a curved Saccharolobus solfataricus type IV pilus
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 8fk0
Q-score: 0.449
Kreutzberger MAB, Cvirkaite-Krupovic V, Liu Y, Baquero DP, Liu J, Sonani RR, Calladine CR, Wang F, Krupovic M, Egelman EH
PNAS (2023) 120 pp. e2304256120-e2304256120 [ Pubmed: 37399404 DOI: doi:10.1073/pnas.2304256120 ]
Structure of the Pyrobaculum calidifontis flagellar-like archaeal type IV pilus
Resolution: 4.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 8fk7
Q-score: 0.411
Kreutzberger MAB, Cvirkaite-Krupovic V, Liu Y, Baquero DP, Liu J, Sonani RR, Calladine CR, Wang F, Krupovic M, Egelman EH
PNAS (2023) 120 pp. e2304256120-e2304256120 [ Pubmed: 37399404 DOI: doi:10.1073/pnas.2304256120 ]
- Flagellin (14 kDa, Protein from Pyrobaculum calidifontis)
- Archaeal type iv pilus (Complex from Pyrobaculum calidifontis)
Condensed RPA-DNA nucleoprotein filament
Resolution: 8.2 Å
EM Method: Single-particle
Fitted PDBs: 8oel
Q-score: 0.038
Madru C, Martinez-Carranza M, Laurent S, Alberti AC, Chevreuil M, Raynal B, Haouz A, Le Meur RA, Delarue M, Henneke G, Flament D, Krupovic M, Legrand P, Sauguet L
Nat Commun (2023) 14 pp. 2326-2326 [ Pubmed: 37087464 DOI: doi:10.1038/s41467-023-38048-w ]
- Rpa14 subunit of the hetero-oligomeric complex involved in homologous recombination (14 kDa, Protein from Pyrococcus abyssi)
- Rpa bound to a 100-mer poly-dt ssdna (100 kDa, Complex)
- Poly dt (30 kDa, DNA from Escherichia coli)
- Rpa 1,2,3 (Complex from Pyrococcus abyssi)
- Replication factor a (41 kDa, Protein from Pyrococcus abyssi)
- Rpa32 subunit of the hetero-oligomeric complex involved in homologous recombination (31 kDa, Protein from Pyrococcus abyssi)
- Zinc ion (65 Da, Ligand)
- Poly dt (Complex from Escherichia coli)