Cyo-EM model for native cystathionine beta-synthase of Mycobacterium tuberculosis.
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7xnz
Q-score: 0.486
Bandyopadhyay P, Pramanick I, Biswas R, Ps S, Sreedharan S, Singh S, Rajmani RS, Laxman S, Dutta S, Singh A
Sci Adv (2022) 8 pp. eabo0097-eabo0097 [ Pubmed: 35749503 DOI: doi:10.1126/sciadv.abo0097 ]
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7xoh
Q-score: 0.502
Bandyopadhyay P, Pramanick I, Biswas R, Ps S, Sreedharan S, Singh S, Rajmani RS, Laxman S, Dutta S, Singh A
Sci Adv (2022) 8 pp. eabo0097-eabo0097 [ Pubmed: 35749503 DOI: doi:10.1126/sciadv.abo0097 ]
- Putative cystathionine beta-synthase rv1077 (50 kDa, Protein from Mycobacterium tuberculosis H37Rv)
- Pyridoxal-5'-phosphate (247 Da, Ligand)
- Cystathionine beta-synthase of mycobacterium tuberculosis in the presence of s-adenosylmethionine. (Complex from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Resolution: 4.25 Å
EM Method: Single-particle
Fitted PDBs: 7xoy
Q-score: 0.39
Bandyopadhyay P, Pramanick I, Biswas R, Ps S, Sreedharan S, Singh S, Rajmani RS, Laxman S, Dutta S, Singh A
Sci Adv (2022) 8 pp. eabo0097-eabo0097 [ Pubmed: 35749503 DOI: doi:10.1126/sciadv.abo0097 ]
- [3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-serine (336 Da, Ligand)
- Cystathionine beta-synthase of mycobacterium tuberculosis in the presence of s-adenosylmethionine and serine. (Complex from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
- Putative cystathionine beta-synthase rv1077 (50 kDa, Protein from Mycobacterium tuberculosis H37Rv)
Cryo-EM 3D model of the 3-RBD up dimeric spike protein of SARS-CoV2 in the presence of SIH-5
Khatri B, Pramanick I, Malladi SK, Rajmani RS, Kumar S, Ghosh P, Sengupta N, Rahisuddin R, Kumar N, Kumaran S, Ringe RP, Varadarajan R, Dutta S, Chatterjee J
Nat Chem Biol (2022) 18 pp. 1046-1055 [ DOI: doi:10.1038/s41589-022-01060-0 Pubmed: 35654847 ]
- Sars-cov2 spike protein (Macromolecule from Severe acute respiratory syndrome coronavirus 2)
- Peptide sih-5 (Macromolecule from synthetic construct)
- Peptide sih-5 (Complex)
- Sars-cov2 spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov2 spike protein in the presence of peptide sih-5 (Complex)
Resolution: 4.47 Å
EM Method: Single-particle
Fitted PDBs: 7x7n
Q-score: 0.348
Khatri B, Pramanick I, Malladi SK, Rajmani RS, Kumar S, Ghosh P, Sengupta N, Rahisuddin R, Kumar N, Kumaran S, Ringe RP, Varadarajan R, Dutta S, Chatterjee J
Nat Chem Biol (2022) 18 pp. 1046-1055 [ DOI: doi:10.1038/s41589-022-01060-0 Pubmed: 35654847 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Peptide sih-5 (Complex)
- Sars-cov2 spike protein (Complex from Severe acute respiratory syndrome coronavirus)
- Sars-cov2 spike protein in the presence of peptide sih-5 (Complex)
- Synthetic peptide sih-5 (4 kDa, Protein from synthetic construct)