Stevens A, Cruz-Cosme R, Armstrong N, Tang Q, Zhou ZH
Virology (2024) 596 pp. 110115-110115 [ DOI: doi:10.1016/j.virol.2024.110115 Pubmed: 38805802 ]
- Triplex protein 2 (Protein from Human herpesvirus 5 strain AD169)
- Triplex protein 1 (Protein from Human herpesvirus 5 strain AD169)
- Small capsomere-interacting protein (Protein from Human herpesvirus 5 strain AD169)
- Human herpesvirus 5 strain ad169 (216 MDa, Virus from Human herpesvirus 5 strain AD169)
- Major capsid protein (Protein from Human herpesvirus 5 strain AD169)
Stevens A, Cruz-Cosme R, Armstrong N, Tang Q, Zhou ZH
Virology (2024) 596 pp. 110115-110115 [ DOI: doi:10.1016/j.virol.2024.110115 Pubmed: 38805802 ]
- Major capsid protein (Protein from Human herpesvirus 5 strain AD169)
- Triplex protein 1 (Protein from Human herpesvirus 5 strain AD169)
- Human herpesvirus 5 strain ad169 (216 MDa, Virus from Human herpesvirus 5 strain AD169)
- Triplex protein 2 (Protein from Human herpesvirus 5 strain AD169)
- Small capsomere-interacting protein (Protein from Human herpesvirus 5 strain AD169)
HCMV AD169 pp150 R40E, R251E, K255E A-capsid vertex
Stevens A, Cruz-Cosme R, Armstrong N, Tang Q, Zhou ZH
Virology (2024) 596 pp. 110115-110115 [ DOI: doi:10.1016/j.virol.2024.110115 Pubmed: 38805802 ]
- Human herpesvirus 5 strain ad169 (216 MDa, Virus from Human herpesvirus 5 strain AD169)
- Major capsid protein (Protein from Human herpesvirus 5 strain AD169)
- Triplex protein 1 (Protein from Human herpesvirus 5 strain AD169)
- Triplex protein 2 (Protein from Human herpesvirus 5 strain AD169)
- Small capsomere-interacting protein (Protein from Human herpesvirus 5 strain AD169)
HCMV AD169 pp150 R40E, R251E, K255E B-capsid vertex
Stevens A, Cruz-Cosme R, Armstrong N, Tang Q, Zhou ZH
Virology (2024) 596 pp. 110115-110115 [ DOI: doi:10.1016/j.virol.2024.110115 Pubmed: 38805802 ]
- Hcmv small capsomere-interacting protein (Protein from Human betaherpesvirus 5)
- Triplex capsid protein 1 (Protein from Human betaherpesvirus 5)
- Hcmv triplex capsid protein 2 (Protein from Human betaherpesvirus 5)
- Human herpesvirus 5 strain ad169 (216 MDa, Virus from Human herpesvirus 5 strain AD169)
- Hcmv major capsid protein (Protein from Human betaherpesvirus 5)
Yeast U1 snRNP with humanized U1C Zinc-Finger domain
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 8w2o
Q-score: 0.417
Chalivendra S, Shi S, Li X, Kuang Z, Giovinazzo J, Zhang L, Rossi J, Wang J, Saviola A, Welty R, Liu S, Vaeth K, Zhou ZH, Hansen K, Taliaferro JM, Zhao R
RNA (2024) [ Pubmed: 38688558 DOI: doi:10.1261/rna.079917.123 ]
- U1 snrna (182 kDa, RNA from Saccharomyces cerevisiae S288C)
- U1 small nuclear ribonucleoprotein c (27 kDa, Protein from Saccharomyces cerevisiae S288C)
- Small nuclear ribonucleoprotein e (10 kDa, Protein from Saccharomyces cerevisiae S288C)
- U1 small nuclear ribonucleoprotein 70 kda homolog (34 kDa, Protein from Saccharomyces cerevisiae S288C)
- Small nuclear ribonucleoprotein sm d3 (11 kDa, Protein from Saccharomyces cerevisiae S288C)
- Small nuclear ribonucleoprotein sm d2 (12 kDa, Protein from Saccharomyces cerevisiae S288C)
- U1snrnp (Complex from Saccharomyces cerevisiae S288C)
- Pre-mrna-processing factor 39 (74 kDa, Protein from Saccharomyces cerevisiae S288C)
- 56 kda u1 small nuclear ribonucleoprotein component (56 kDa, Protein from Saccharomyces cerevisiae S288C)
- Small nuclear ribonucleoprotein f (9 kDa, Protein from Saccharomyces cerevisiae S288C)
- U1 small nuclear ribonucleoprotein component snu71 (5 kDa, Protein from Saccharomyces cerevisiae S288C)
- Small nuclear ribonucleoprotein sm d1 (16 kDa, Protein from Saccharomyces cerevisiae S288C)
- Protein luc7 (30 kDa, Protein from Saccharomyces cerevisiae S288C)
- Protein nam8 (57 kDa, Protein from Saccharomyces cerevisiae S288C)
- Small nuclear ribonucleoprotein g (8 kDa, Protein from Saccharomyces cerevisiae S288C)
- Small nuclear ribonucleoprotein-associated protein b (22 kDa, Protein from Saccharomyces cerevisiae S288C)
- U1 small nuclear ribonucleoprotein a (40 kDa, Protein from Saccharomyces cerevisiae S288C)
- Act1 pre-mrna (59 kDa, RNA from Saccharomyces cerevisiae S288C)
- U1 small nuclear ribonucleoprotein component prp42 (65 kDa, Protein from Saccharomyces cerevisiae S288C)
Resolution: 2.33 Å
EM Method: Single-particle
Fitted PDBs: 8ud2
Q-score: 0.672
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, consensus form
Resolution: 2.67 Å
EM Method: Single-particle
Fitted PDBs: 8ud3
Q-score: 0.605
Ito F, Yang H, Zhou ZH, Chen XS
Protein Cell (2024) [ Pubmed: 38613382 DOI: doi:10.1093/procel/pwae009 ]
- Homohexamer of nsp15 in complex with poly(a/u) rna (262 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- Rna (35-mer) (10 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
- Non-structural protein 15 (40 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Rna (35-mer) (11 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, state 1
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 8ud4
Q-score: 0.511
Ito F, Yang H, Zhou ZH, Chen XS
Protein Cell (2024) [ Pubmed: 38613382 DOI: doi:10.1093/procel/pwae009 ]
- Non-structural protein 15 (40 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Rna (35-mer) (10 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
- Rna (35-mer) (11 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
- Homohexamer of nsp15 in complex with rna duplex (262 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, state 2
Resolution: 3.13 Å
EM Method: Single-particle
Fitted PDBs: 8ud5
Q-score: 0.541
Ito F, Yang H, Zhou ZH, Chen XS
Protein Cell (2024) [ Pubmed: 38613382 DOI: doi:10.1093/procel/pwae009 ]
- Rna (35-mer) (11 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
- Homohexamer of nsp15 in complex with rna duplex (262 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- Rna (35-mer) (10 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
- Non-structural protein 15 (40 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)