Cryo-EM structure of Coxsackievirus B1 mature virion
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7dpf
Q-score: 0.601
Xu L, Zheng Q, Zhu R, Yin Z, Yu H, Lin Y, Wu Y, He M, Huang Y, Jiang Y, Sun H, Zha Z, Yang H, Huang Q, Zhang D, Chen Z, Ye X, Han J, Yang L, Liu C, Que Y, Fang M, Gu Y, Zhang J, Luo W, Zhou ZH, Li S, Cheng T, Xia N
Cell Host Microbe (2021) 29 pp. 448-462.e5 [ DOI: doi:10.1016/j.chom.2021.01.001 Pubmed: 33539764 ]
- Vp2 (29 kDa, Protein from Coxsackievirus B1)
- Palmitic acid (256 Da, Ligand)
- Vp3 (26 kDa, Protein from Coxsackievirus B1)
- Capsid protein vp4 (7 kDa, Protein from Coxsackievirus B1)
- Virion protein 1 (31 kDa, Protein from Coxsackievirus B1)
- Coxsackievirus b1 (Virus from Coxsackievirus B1)
Cryo-EM structure of Coxsackievirus B1 empty particle
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7dpg
Q-score: 0.542
Xu L, Zheng Q, Zhu R, Yin Z, Yu H, Lin Y, Wu Y, He M, Huang Y, Jiang Y, Sun H, Zha Z, Yang H, Huang Q, Zhang D, Chen Z, Ye X, Han J, Yang L, Liu C, Que Y, Fang M, Gu Y, Zhang J, Luo W, Zhou ZH, Li S, Cheng T, Xia N
Cell Host Microbe (2021) 29 pp. 448-462.e5 [ DOI: doi:10.1016/j.chom.2021.01.001 Pubmed: 33539764 ]
- Virion protein 1 (31 kDa, Protein from Coxsackievirus B1)
- Vp2 (29 kDa, Protein from Coxsackievirus B1)
- Coxsackievirus b1 (Virus from Coxsackievirus B1)
- Vp3 (26 kDa, Protein from Coxsackievirus B1)
Cryo-EM structure of Coxsackievirus B1 virion in complex with CAR
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7dpz
Q-score: 0.511
Xu L, Zheng Q, Zhu R, Yin Z, Yu H, Lin Y, Wu Y, He M, Huang Y, Jiang Y, Sun H, Zha Z, Yang H, Huang Q, Zhang D, Chen Z, Ye X, Han J, Yang L, Liu C, Que Y, Fang M, Gu Y, Zhang J, Luo W, Zhou ZH, Li S, Cheng T, Xia N
Cell Host Microbe (2021) 29 pp. 448-462.e5 [ DOI: doi:10.1016/j.chom.2021.01.001 Pubmed: 33539764 ]
- Vp2 (29 kDa, Protein from Coxsackievirus B1)
- Capsid protein vp4 (7 kDa, Protein from Coxsackievirus B1)
- Coxsackievirus and adenovirus receptor (13 kDa, Protein from Human)
- Virion protein 1 (31 kDa, Protein from Coxsackievirus B1)
- Coxsackievirus b1 (Virus from Coxsackievirus B1)
- Vp3 (26 kDa, Protein from Coxsackievirus B1)
Cryo-EM structure of Coxsackievirus B1 virion in complex with CAR at physiological temperature
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7dq1
Q-score: 0.512
Xu L, Zheng Q, Zhu R, Yin Z, Yu H, Lin Y, Wu Y, He M, Huang Y, Jiang Y, Sun H, Zha Z, Yang H, Huang Q, Zhang D, Chen Z, Ye X, Han J, Yang L, Liu C, Que Y, Fang M, Gu Y, Zhang J, Luo W, Zhou ZH, Li S, Cheng T, Xia N
Cell Host Microbe (2021) 29 pp. 448-462.e5 [ DOI: doi:10.1016/j.chom.2021.01.001 Pubmed: 33539764 ]
- Vp2 (29 kDa, Protein from Coxsackievirus B1)
- Vp3 (26 kDa, Protein from Coxsackievirus B1)
- Capsid protein vp4 (7 kDa, Protein from Coxsackievirus B1)
- Virion protein 1 (31 kDa, Protein from Coxsackievirus B1)
- Coxsackievirus and adenovirus receptor (13 kDa, Protein from Human)
- Coxsackievirus b1 (Virus from Coxsackievirus B1)
Cryo-EM structure of CAR triggered Coxsackievirus B1 A-particle
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7dq4
Q-score: 0.502
Xu L, Zheng Q, Zhu R, Yin Z, Yu H, Lin Y, Wu Y, He M, Huang Y, Jiang Y, Sun H, Zha Z, Yang H, Huang Q, Zhang D, Chen Z, Ye X, Han J, Yang L, Liu C, Que Y, Fang M, Gu Y, Zhang J, Luo W, Zhou ZH, Li S, Cheng T, Xia N
Cell Host Microbe (2021) 29 pp. 448-462.e5 [ DOI: doi:10.1016/j.chom.2021.01.001 Pubmed: 33539764 ]
- Virion protein 1 (31 kDa, Protein from Coxsackievirus B1)
- Coxsackievirus b1 (Virus from Coxsackievirus B1)
- Vp3 (26 kDa, Protein from Coxsackievirus B1)
- Vp2 (29 kDa, Protein from Coxsackievirus B1)
Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 5F5
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7dq7
Q-score: 0.565
Xu L, Zheng Q, Zhu R, Yin Z, Yu H, Lin Y, Wu Y, He M, Huang Y, Jiang Y, Sun H, Zha Z, Yang H, Huang Q, Zhang D, Chen Z, Ye X, Han J, Yang L, Liu C, Que Y, Fang M, Gu Y, Zhang J, Luo W, Zhou ZH, Li S, Cheng T, Xia N
Cell Host Microbe (2021) 29 pp. 448-462.e5 [ DOI: doi:10.1016/j.chom.2021.01.001 Pubmed: 33539764 ]
- Coxsackievirus b1 complex with nab 5f5 (Complex)
- Vp2 (29 kDa, Protein from Coxsackievirus B1)
- Capsid protein vp4 (7 kDa, Protein from Coxsackievirus B1)
- Coxsackievirus b1 (Complex from Coxsackievirus B1)
- Virion protein 1 (31 kDa, Protein from Coxsackievirus B1)
- 5f5 vl (11 kDa, Protein from Mus musculus)
- Nab 5f5 (Complex from Mus musculus)
- Palmitic acid (256 Da, Ligand)
- 5f5 vh (13 kDa, Protein from Mus musculus)
- Vp3 (26 kDa, Protein from Coxsackievirus B1)
The structure of Enterovirus D68 mature virion
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6aj0
Q-score: 0.547
Zheng Q, Zhu R, Xu L, He M, Yan X, Liu D, Yin Z, Wu Y, Li Y, Yang L, Hou W, Li S, Li Z, Chen Z, Li Z, Yu H, Gu Y, Zhang J, Baker TS, Zhou ZH, Graham BS, Cheng T, Li S, Xia N
Nat Microbiol (2019) 4 pp. 124-133 [ Pubmed: 30397341 DOI: doi:10.1038/s41564-018-0275-7 ]
- Coxsackievirus a10 (Virus from Coxsackievirus A10)
- Capsid protein vp4 (7 kDa, Protein from Enterovirus D68)
- Capsid protein vp3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Virion protein 2 (27 kDa, Protein from Enterovirus D68)
The structure of ICAM-5 triggered Enterovirus D68 virus A-particle
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6aj2
Q-score: 0.412
Zheng Q, Zhu R, Xu L, He M, Yan X, Liu D, Yin Z, Wu Y, Li Y, Yang L, Hou W, Li S, Li Z, Chen Z, Li Z, Yu H, Gu Y, Zhang J, Baker TS, Zhou ZH, Graham BS, Cheng T, Li S, Xia N
Nat Microbiol (2019) 4 pp. 124-133 [ DOI: doi:10.1038/s41564-018-0275-7 Pubmed: 30397341 ]
- Enterovirus d (Virus from Enterovirus D)
- Capsid protein vp2 (27 kDa, Protein from Enterovirus D68)
- Capsid protein vp1 (32 kDa, Protein from Enterovirus D68)
- Capsid protein vp3 (27 kDa, Protein from Enterovirus D68)
The structure of Enterovirus D68 procapsid
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6aj3
Q-score: 0.472
Zheng Q, Zhu R, Xu L, He M, Yan X, Liu D, Yin Z, Wu Y, Li Y, Yang L, Hou W, Li S, Li Z, Chen Z, Li Z, Yu H, Gu Y, Zhang J, Baker TS, Zhou ZH, Graham BS, Cheng T, Li S, Xia N
Nat Microbiol (2019) 4 pp. 124-133 [ DOI: doi:10.1038/s41564-018-0275-7 Pubmed: 30397341 ]
- Capsid protein vp2 (27 kDa, Protein from Enterovirus D68)
- Capsid protein vp1 (32 kDa, Protein from Enterovirus D68)
- Enterovirus d (Virus from Enterovirus d)
- Capsid protein vp3 (27 kDa, Protein from Enterovirus D68)
The structure of Enterovirus D68 mature virion in complex with Fab 15C5
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6aj7
Q-score: 0.518
Zheng Q, Zhu R, Xu L, He M, Yan X, Liu D, Yin Z, Wu Y, Li Y, Yang L, Hou W, Li S, Li Z, Chen Z, Li Z, Yu H, Gu Y, Zhang J, Baker TS, Zhou ZH, Graham BS, Cheng T, Li S, Xia N
Nat Microbiol (2019) 4 pp. 124-133 [ Pubmed: 30397341 DOI: doi:10.1038/s41564-018-0275-7 ]
- Enterovirus d68 (Virus from Enterovirus D68)
- Vh of fab 15c5 (13 kDa, Protein from Mus musculus)
- Capsid protein vp1 (32 kDa, Protein from Enterovirus D68)
- Capsid protein vp3 (27 kDa, Protein from Enterovirus D68)
- Capsid protein vp2 (27 kDa, Protein from Enterovirus D68)
- Vl of fab 15c5 (11 kDa, Protein from Mus musculus)