EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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dna/ polymerase AND electron_source:"FIELD EMISSION GUN" AND xref_links:"interpro" AND film_detector_model:"GATAN K3 (6K X 4K)" AND author_name:"Xu Y"

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EMD-30779

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Structure of Human RNA Polymerase III elongation complex

Release date: March 17, 2021
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7dn3
Q-score: 0.307

Li L, Yu Z, Zhao D, Ren Y, Hou H, Xu Y

Cell Res (2021) 31 pp. 791-800 [ Pubmed: 33674783 DOI: doi:10.1038/s41422-021-00472-2 ]

Sample:

Rna polymerase iii elongation (Complex from Homo sapiens)
Structure of human rna polymerase iii elongation complex (Complex from Homo sapiens)
Dna (Complex from Homo sapiens)
Dna-directed rna polymerases i and iii subunit rpac1 (39 kDa, Protein from Homo sapiens)
Dna (5'-d(p*tp*cp*gp*tp*cp*tp*gp*ap*tp*cp*tp*cp*gp*gp*ap*a)-3') (4 kDa, DNA from Homo sapiens)
Rna (Complex)
Dna-directed rna polymerase iii subunit rpc2 (127 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc4 (7 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i and iii subunit rpac2 (15 kDa, Protein from Homo sapiens)
Zinc ion (65 Da, Ligand)
Dna-directed rna polymerases i, ii, and iii subunit rpabc2 (14 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc4 (44 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (17 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc1 (155 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc7 (25 kDa, Protein from Homo sapiens)
Rna (5'-r(p*cp*cp*cp*gp*ap*u)-3') (1 kDa, RNA from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc9 (16 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc3 (60 kDa, Protein from Homo sapiens)
Magnesium ion (24 Da, Ligand)
Dna-directed rna polymerase iii subunit rpc10 (12 kDa, Protein from Homo sapiens)
Dna (5'-d(p*tp*tp*cp*cp*gp*ap*gp*ap*tp*cp*ap*gp*ap*cp*gp*ap*gp*ap*tp*cp*gp*gp*g)-3') (7 kDa, DNA from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (7 kDa, Protein from Homo sapiens)
Iron/sulfur cluster (351 Da, Ligand)
Dna-directed rna polymerase iii subunit rpc5 (80 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc1 (24 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc8 (22 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc6 (35 kDa, Protein from Homo sapiens)

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EMD-30577

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cryo-EM structure of human RNA polymerase III in elongating state

Release date: Feb. 17, 2021
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7d58
Q-score: 0.014

Wang Q, Li S, Wan F, Xu Y, Wu Z, Cao M, Lan P, Lei M, Wu J

Nat Struct Mol Biol (2021) 28 pp. 220-227 [ Pubmed: 33558766 DOI: doi:10.1038/s41594-021-00557-x ]

Sample:

Dna-directed rna polymerase iii subunit rpc6 (35 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc1 (24 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i and iii subunit rpac1 (39 kDa, Protein from Homo sapiens)
Non-template dna (12 kDa, DNA from Homo sapiens)
Human pol3 ec (Complex from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc7 (25 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc1 (155 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc8 (22 kDa, Protein from Homo sapiens)
Template dna (12 kDa, DNA from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc9 (16 kDa, Protein from Homo sapiens)
Rna (6 kDa, RNA from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc5 (80 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc3 (60 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc4 (44 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc4 (7 kDa, Protein from Homo sapiens)
Iron/sulfur cluster (351 Da, Ligand)
Dna-directed rna polymerase iii subunit rpc10 (12 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (7 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc2 (14 kDa, Protein from Homo sapiens)
Zinc ion (65 Da, Ligand)
Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (17 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i and iii subunit rpac2 (15 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc2 (127 kDa, Protein from Homo sapiens)

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EMD-30578

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cryo-EM structure of human RNA polymerase III in apo state

Release date: Feb. 17, 2021
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7d59
Q-score: 0.391

Wang Q, Li S, Wan F, Xu Y, Wu Z, Cao M, Lan P, Lei M, Wu J

Nat Struct Mol Biol (2021) 28 pp. 220-227 [ DOI: doi:10.1038/s41594-021-00557-x Pubmed: 33558766 ]

Sample:

Dna-directed rna polymerases i and iii subunit rpac1 (39 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc2 (127 kDa, Protein from Homo sapiens)
Rna pol3 apo (Complex from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc4 (7 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i and iii subunit rpac2 (15 kDa, Protein from Homo sapiens)
Zinc ion (65 Da, Ligand)
Dna-directed rna polymerases i, ii, and iii subunit rpabc2 (14 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc4 (44 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (17 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc1 (155 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc7 (25 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc9 (16 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc3 (60 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc10 (12 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (7 kDa, Protein from Homo sapiens)
Iron/sulfur cluster (351 Da, Ligand)
Dna-directed rna polymerase iii subunit rpc5 (80 kDa, Protein from Homo sapiens)
Dna-directed rna polymerases i, ii, and iii subunit rpabc1 (24 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc8 (22 kDa, Protein from Homo sapiens)
Dna-directed rna polymerase iii subunit rpc6 (35 kDa, Protein from Homo sapiens)

[Show more]

Sort by: Download

Showing 1 - 3 of 3. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [3]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: