EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

Edit your search query here and hit Return to execute it:

initial_angle_assignment_type:"MAXIMUM LIKELIHOOD" AND author_name:"Wang P" AND assembly_molecular_weight:{500000 TO 1000000] AND sample_type:"ligand" AND film_detector_model:"GATAN K3 (6K X 4K)" AND author_name:"Zhang P"

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

EMD-33849

Download Map 3D View

Cryo-EM map of Rpd3S in loose-state Rpd3S-NCP complex

Release date: June 14, 2023
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7yi2
Q-score: 0.483

Guan H, Wang P, Zhang P, Ruan C, Ou Y, Peng B, Zheng X, Lei J, Li B, Yan C, Li H

Nature (2023) 620 pp. 669-675 [ DOI: doi:10.1038/s41586-023-06349-1 Pubmed: 37468628 ]

Sample:

Wisdom 601 dna (167-mer) (51 kDa, DNA from synthetic construct)
Transcriptional regulatory protein sin3 (175 kDa, Protein from Saccharomyces cerevisiae S288C)
Rpd3s complex with h3k36me3 nucleosome (723 MDa, Complex from synthetic construct)
Zinc ion (65 Da, Ligand)
Wisdom 601 dna (167-mer) (51 kDa, DNA from synthetic construct)
Transcriptional regulatory protein rco1 (78 kDa, Protein from Saccharomyces cerevisiae S288C)
Histone deacetylase rpd3 (48 kDa, Protein from Saccharomyces cerevisiae S288C)
Chromatin modification-related protein eaf3 (45 kDa, Protein from Saccharomyces cerevisiae S288C)
Sin3/rpd3/eaf3/rco1 (Complex)
Dna (Complex from Saccharomyces cerevisiae S288C)

[Show more]

EMD-33852

Download Map 3D View

Cryo-EM msp of Rpd3S complex bound to H3K36me3 nucleosome in loose state

Release date: June 14, 2023
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 7yi5
Q-score: 0.254

Guan H, Wang P, Zhang P, Ruan C, Ou Y, Peng B, Zheng X, Lei J, Li B, Yan C, Li H

Nature (2023) 620 pp. 669-675 [ DOI: doi:10.1038/s41586-023-06349-1 Pubmed: 37468628 ]

Sample:

Wisdom 601 dna (167-mer) (51 kDa, DNA from synthetic construct)
Dna (Complex from Xenopus laevis)
Histone h4 (11 kDa, Protein from Xenopus laevis)
Transcriptional regulatory protein sin3 (175 kDa, Protein from Saccharomyces cerevisiae S288C)
Chromatin modification-related protein eaf3 (45 kDa, Protein from Saccharomyces cerevisiae S288C)
Zinc ion (65 Da, Ligand)
Histone h2a (13 kDa, Protein from Xenopus laevis)
Histone h3 (Complex)
Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
Wisdom 601 dna (167-mer) (51 kDa, DNA from synthetic construct)
Histone h3 (15 kDa, Protein from Xenopus laevis)
Transcriptional regulatory protein rco1 (78 kDa, Protein from Saccharomyces cerevisiae S288C)
Histone deacetylase rpd3 (48 kDa, Protein from Saccharomyces cerevisiae S288C)
Histone h4/h2a/h2b 1.1 (Complex from synthetic construct)
Rpd3s complex with h3k36me3 nucleosome (723 MDa, Complex from Saccharomyces cerevisiae S288C)
Sin3/rpd3/eaf3/rco1 (Complex from Xenopus laevis)

[Show more]

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: