Golden Shiner Reovirus Core Polar Vertex
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8fjk
Q-score: 0.467
Stevens A, Cui Y, Shivakoti S, Zhou ZH
Protein Cell (2023) 14 pp. 544-548 [ Pubmed: 36856784 DOI: doi:10.1093/procel/pwad002 ]
- Rna (40-mer) (12 kDa, RNA from Golden shiner reovirus)
- Rna (30-mer) (9 kDa, RNA from Golden shiner reovirus)
- Rna (52-mer) (16 kDa, RNA from Golden shiner reovirus)
- Clamp protein vp6 (44 kDa, Protein from Golden shiner reovirus)
- Outer capsid protein vp1 (141 kDa, Protein from Golden shiner reovirus)
- Microtubule-associated protein vp5 (79 kDa, Protein from Golden shiner reovirus)
- Zinc ion (65 Da, Ligand)
- Golden shiner reovirus (47 MDa, Virus from Golden shiner reovirus)
- Rna (38-mer) (12 kDa, RNA from Golden shiner reovirus)
- Rna-directed rna polymerase vp2 (141 kDa, Protein from Golden shiner reovirus)
- Major inner capsid protein vp3 (9 kDa, Protein from Golden shiner reovirus)
- Rna (18-mer) (5 kDa, RNA from Golden shiner reovirus)
- Major inner capsid protein vp3 (124 kDa, Protein from Golden shiner reovirus)
- Rna (60-mer) (19 kDa, RNA from Golden shiner reovirus)
Golden Shiner Reovirus Core Tropical Vertex
Resolution: 3.27 Å
EM Method: Single-particle
Fitted PDBs: 8fjl
Q-score: 0.465
Stevens A, Cui Y, Shivakoti S, Zhou ZH
Protein Cell (2023) 14 pp. 544-548 [ DOI: doi:10.1093/procel/pwad002 Pubmed: 36856784 ]
- Rna (60-mer) (19 kDa, RNA from Golden shiner reovirus)
- Major inner capsid protein vp3 (9 kDa, Protein from Golden shiner reovirus)
- Microtubule-associated protein vp5 (79 kDa, Protein from Golden shiner reovirus)
- Major inner capsid protein vp3 (124 kDa, Protein from Golden shiner reovirus)
- Rna (52-mer) (16 kDa, RNA from Golden shiner reovirus)
- Golden shiner reovirus (47 MDa, Virus from Golden shiner reovirus)
- Rna (38-mer) (8 kDa, RNA from Golden shiner reovirus)
- Clamp protein vp6 (44 kDa, Protein from Golden shiner reovirus)
- Outer capsid protein vp1 (141 kDa, Protein from Golden shiner reovirus)
- Zinc ion (65 Da, Ligand)
- Rna-directed rna polymerase vp2 (141 kDa, Protein from Golden shiner reovirus)
- Rna (30-mer) (12 kDa, RNA from Golden shiner reovirus)
- Rna (39-mer) (12 kDa, RNA from Golden shiner reovirus)
icosahedral symmetry reconstruction of brome mosaic virus (RNA 3+4)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6voc
Q-score: 0.417
Beren C, Cui Y, Chakravarty A, Yang X, Rao ALN, Knobler CM, Zhou ZH, Gelbart WM
PNAS (2020) 117 pp. 10673-10680 [ DOI: doi:10.1073/pnas.1915078117 Pubmed: 32358197 ]
- Capsid protein (20 kDa, Protein from Brome mosaic virus)
- Brome mosaic virus (Virus from Brome mosaic virus)
CryoEM structure of the human ClC-1 chloride channel, membrane domain
Resolution: 3.63 Å
EM Method: Single-particle
Fitted PDBs: 6qv6
Q-score: 0.44
Wang K, Preisler SS, Zhang L, Cui Y, Missel JW, Gronberg C, Gotfryd K, Lindahl E, Andersson M, Calloe K, Egea PF, Klaerke DA, Pusch M, Pedersen PA, Zhou ZH, Gourdon P
PLoS Biol (2019) 17 pp. e3000218-e3000218 [ Pubmed: 31022181 DOI: doi:10.1371/journal.pbio.3000218 ]
- Chloride channel protein 1 (108 kDa, Protein from Homo sapiens)
- Human chloride channel protein 1 (109 kDa, Complex from Homo sapiens)
CryoEM structure of the human ClC-1 chloride channel, CBS state 1
Resolution: 4.34 Å
EM Method: Single-particle
Fitted PDBs: 6qvb
Q-score: 0.25
Wang K, Preisler SS, Zhang L, Cui Y, Missel JW, Gronberg C, Gotfryd K, Lindahl E, Andersson M, Calloe K, Egea PF, Klaerke DA, Pusch M, Pedersen PA, Zhou ZH, Gourdon P
PLoS Biol (2019) 17 pp. e3000218-e3000218 [ Pubmed: 31022181 DOI: doi:10.1371/journal.pbio.3000218 ]
- Chloride channel protein 1 (108 kDa, Protein from Homo sapiens)
- Human chloride channel protein 1 (109 kDa, Complex from Homo sapiens)
CryoEM structure of the human ClC-1 chloride channel, CBS state 1
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6qvc
Q-score: 0.313
Wang K, Preisler SS, Zhang L, Cui Y, Missel JW, Gronberg C, Gotfryd K, Lindahl E, Andersson M, Calloe K, Egea PF, Klaerke DA, Pusch M, Pedersen PA, Zhou ZH, Gourdon P
PLoS Biol (2019) 17 pp. e3000218-e3000218 [ Pubmed: 31022181 DOI: doi:10.1371/journal.pbio.3000218 ]
- Chloride channel protein 1 (108 kDa, Protein from Homo sapiens)
- Human chloride channel protein 1 (109 kDa, Complex from Homo sapiens)
CryoEM structure of the human ClC-1 chloride channel, CBS state 2
Resolution: 4.34 Å
EM Method: Single-particle
Fitted PDBs: 6qvd
Q-score: 0.224
Wang K, Preisler SS, Zhang L, Cui Y, Missel JW, Gronberg C, Gotfryd K, Lindahl E, Andersson M, Calloe K, Egea PF, Klaerke DA, Pusch M, Pedersen PA, Zhou ZH, Gourdon P
PLoS Biol (2019) 17 pp. e3000218-e3000218 [ Pubmed: 31022181 DOI: doi:10.1371/journal.pbio.3000218 ]
- Chloride channel protein 1 (108 kDa, Protein from Homo sapiens)
- Human chloride channel protein 1 (109 kDa, Complex from Homo sapiens)
CryoEM structure of the human ClC-1 chloride channel, low pH
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6qvu
Q-score: 0.227
Wang K, Preisler SS, Zhang L, Cui Y, Missel JW, Gronberg C, Gotfryd K, Lindahl E, Andersson M, Calloe K, Egea PF, Klaerke DA, Pusch M, Pedersen PA, Zhou ZH, Gourdon P
PLoS Biol (2019) 17 pp. e3000218-e3000218 [ Pubmed: 31022181 DOI: doi:10.1371/journal.pbio.3000218 ]
- Chloride channel protein 1 (108 kDa, Protein from Homo sapiens)
- Human chloride channel protein 1 (109 kDa, Complex from Homo sapiens)
CryoEM structure of Helicobacter pylori urea channel in closed state
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 6nsj
Q-score: 0.509
Cui Y, Zhou K, Strugatsky D, Wen Y, Sachs G, Zhou ZH, Munson K
Sci Adv (2019) 5 pp. eaav8423-eaav8423 [ DOI: doi:10.1126/sciadv.aav8423 Pubmed: 30906870 ]
CryoEM structure of Helicobacter pylori urea channel in open state.
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 6nsk
Q-score: 0.591
Cui Y, Zhou K, Strugatsky D, Wen Y, Sachs G, Zhou ZH, Munson K
Sci Adv (2019) 5 pp. eaav8423-eaav8423 [ Pubmed: 30906870 DOI: doi:10.1126/sciadv.aav8423 ]