Full-length APOBEC3G in complex with HIV-1 Vif, CBF-beta, and fork RNA
Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 8e40
Q-score: 0.343
Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS
Sci Adv (2023) 9 pp. eade3168-eade3168 [ Pubmed: 36598981 DOI: doi:10.1126/sciadv.ade3168 ]
- Complex of apobec3g with hiv-1 vif and cbf-beta bound to fork rna (99 kDa, Complex from Human immunodeficiency virus 1)
- Virion infectivity factor (21 kDa, Protein from Human immunodeficiency virus 1)
- Core-binding factor subunit beta (18 kDa, Protein from Homo sapiens)
- Rna (6 kDa, RNA from Escherichia coli)
- Rna (8 kDa, RNA from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- Dna dc->du-editing enzyme apobec-3g (45 kDa, Protein from Macaca mulatta)
APOBEC3G in complex with HIV-1 Vif/CBF-beta/EloB/EloC/Cul5/Rbx2
Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS
Sci Adv (2023) 9 pp. eade3168-eade3168 [ Pubmed: 36598981 DOI: doi:10.1126/sciadv.ade3168 ]
- Elongin-b (Protein from Homo sapiens)
- Elongin-c (Protein from Homo sapiens)
- Cullin-5 (Protein from Homo sapiens)
- Ring-box protein 2 (Protein from Homo sapiens)
- Virion infectivity factor (Protein from Human immunodeficiency virus 1)
- Complex of apobec3g with hiv-1 vif, cbf-beta, elongin-b, elongin-c, cullin-5, and ring-box protein 2 (210 kDa, Complex from Human immunodeficiency virus 1)
- Apobec3g (Protein from Macaca mulatta)
- Core-binding factor subunit beta (Protein from Homo sapiens)
Human telomerase H/ACA RNP at 3.3 Angstrom
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7trc
Q-score: 0.498
Liu B, He Y, Wang Y, Song H, Zhou ZH, Feigon J
Nature (2022) 604 pp. 578-583 [ Pubmed: 35418675 DOI: doi:10.1038/s41586-022-04582-8 ]
- H/aca ribonucleoprotein complex subunit 2 (17 kDa, Protein from Homo sapiens)
- Human telomerase h/aca rnp (Complex from Homo sapiens)
- Telomerase cajal body protein 1 (59 kDa, Protein from Homo sapiens)
- H/aca ribonucleoprotein complex subunit dkc1 (57 kDa, Protein from Homo sapiens)
- Telomerase rna, partial sequence (145 kDa, RNA from Homo sapiens)
- H/aca ribonucleoprotein complex subunit 1 (22 kDa, Protein from Homo sapiens)
- H/aca ribonucleoprotein complex subunit 3 (7 kDa, Protein from Homo sapiens)
Human telomerase catalytic core structure at 3.3 Angstrom
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7trd
Q-score: 0.447
Liu B, He Y, Wang Y, Song H, Zhou ZH, Feigon J
Nature (2022) 604 pp. 578-583 [ Pubmed: 35418675 DOI: doi:10.1038/s41586-022-04582-8 ]
- Telomeric repeat substrate (5 kDa, DNA from Homo sapiens)
- Telomerase rna, partial sequence (145 kDa, RNA from Homo sapiens)
- Telomerase reverse transcriptase (130 kDa, Protein from Homo sapiens)
- Human telomerase catalytic core with dna-substrate (Complex from Homo sapiens)
Human telomerase catalytic core with shelterin protein TPP1
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7tre
Q-score: 0.392
Liu B, He Y, Wang Y, Song H, Zhou ZH, Feigon J
Nature (2022) 604 pp. 578-583 [ Pubmed: 35418675 DOI: doi:10.1038/s41586-022-04582-8 ]
- Adrenocortical dysplasia protein homolog (17 kDa, Protein from Homo sapiens)
- Telomerase reverse transcriptase (130 kDa, Protein from Homo sapiens)
- Telomerase rna, partial sequence (145 kDa, RNA from Homo sapiens)
- Telomeric repeat substrate (5 kDa, DNA from Homo sapiens)
- Active human telomerase rnp with shelterin protein tpp1 (Complex from Homo sapiens)
Human telomerase catalytic core RNP with H2A/H2B
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7trf
Q-score: 0.369
Liu B, He Y, Wang Y, Song H, Zhou ZH, Feigon J
Nature (2022) 604 pp. 578-583 [ Pubmed: 35418675 DOI: doi:10.1038/s41586-022-04582-8 ]
- Telomerase reverse transcriptase (130 kDa, Protein from Homo sapiens)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Telomerase rna, partial sequence (145 kDa, RNA from Homo sapiens)
- Telomeric repeat substrate (5 kDa, DNA from Homo sapiens)
- Histone h2a (14 kDa, Protein from Homo sapiens)
- Active human telomerase catalytic core with shelterin protein tpp1 (Complex from Homo sapiens)
CryoEM structure of the human ClC-1 chloride channel, membrane domain
Resolution: 3.63 Å
EM Method: Single-particle
Fitted PDBs: 6qv6
Q-score: 0.44
Wang K, Preisler SS, Zhang L, Cui Y, Missel JW, Gronberg C, Gotfryd K, Lindahl E, Andersson M, Calloe K, Egea PF, Klaerke DA, Pusch M, Pedersen PA, Zhou ZH, Gourdon P
PLoS Biol (2019) 17 pp. e3000218-e3000218 [ Pubmed: 31022181 DOI: doi:10.1371/journal.pbio.3000218 ]
- Chloride channel protein 1 (108 kDa, Protein from Homo sapiens)
- Human chloride channel protein 1 (109 kDa, Complex from Homo sapiens)
CryoEM structure of the human ClC-1 chloride channel, CBS state 1
Resolution: 4.34 Å
EM Method: Single-particle
Fitted PDBs: 6qvb
Q-score: 0.25
Wang K, Preisler SS, Zhang L, Cui Y, Missel JW, Gronberg C, Gotfryd K, Lindahl E, Andersson M, Calloe K, Egea PF, Klaerke DA, Pusch M, Pedersen PA, Zhou ZH, Gourdon P
PLoS Biol (2019) 17 pp. e3000218-e3000218 [ Pubmed: 31022181 DOI: doi:10.1371/journal.pbio.3000218 ]
- Chloride channel protein 1 (108 kDa, Protein from Homo sapiens)
- Human chloride channel protein 1 (109 kDa, Complex from Homo sapiens)
CryoEM structure of the human ClC-1 chloride channel, CBS state 1
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6qvc
Q-score: 0.313
Wang K, Preisler SS, Zhang L, Cui Y, Missel JW, Gronberg C, Gotfryd K, Lindahl E, Andersson M, Calloe K, Egea PF, Klaerke DA, Pusch M, Pedersen PA, Zhou ZH, Gourdon P
PLoS Biol (2019) 17 pp. e3000218-e3000218 [ Pubmed: 31022181 DOI: doi:10.1371/journal.pbio.3000218 ]
- Chloride channel protein 1 (108 kDa, Protein from Homo sapiens)
- Human chloride channel protein 1 (109 kDa, Complex from Homo sapiens)
CryoEM structure of the human ClC-1 chloride channel, CBS state 2
Resolution: 4.34 Å
EM Method: Single-particle
Fitted PDBs: 6qvd
Q-score: 0.224
Wang K, Preisler SS, Zhang L, Cui Y, Missel JW, Gronberg C, Gotfryd K, Lindahl E, Andersson M, Calloe K, Egea PF, Klaerke DA, Pusch M, Pedersen PA, Zhou ZH, Gourdon P
PLoS Biol (2019) 17 pp. e3000218-e3000218 [ Pubmed: 31022181 DOI: doi:10.1371/journal.pbio.3000218 ]
- Chloride channel protein 1 (108 kDa, Protein from Homo sapiens)
- Human chloride channel protein 1 (109 kDa, Complex from Homo sapiens)