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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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initial_angle_assignment_type:"MAXIMUM LIKELIHOOD" AND author_orcid:"0000-0002-8373-4717" AND xref_links:"cath" AND microscope_name:"FEI TITAN KRIOS" AND author_name:"Gao Y"

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EMD-0357

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Structure of bacteriophage T7 E343Q mutant gp4 helicase-primase in complex with ssDNA, dTTP, AC dinucleotide and CTP (gp4(5)-DNA)

Release date: March 6, 2019
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6n7i
Q-score: 0.483

Gao Y, Cui Y, Fox T, Lin S, Wang H, de Val N, Zhou ZH, Yang W

Science (2019) 363 [ Pubmed: 30679383 DOI: doi:10.1126/science.aav7003 ]

Sample:

Dna (25-mer) (7 kDa, DNA from Enterobacteria phage T7)
Dna primase/helicase (62 kDa, Protein from Enterobacteria phage T7)
Thymidine-5'-triphosphate (482 Da, Ligand)
Magnesium ion (24 Da, Ligand)
Water (18 Da, Ligand)
Bacteriophage t7 gene product 4 (gp4) helicase primase dna complex with five helicase subunits ordered (Complex from Enterobacteria phage T7)

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EMD-0359

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Structure of bacteriophage T7 E343Q mutant gp4 helicase-primase in complex with ssDNA, dTTP, AC dinucleotide and CTP (form I)

Release date: March 6, 2019
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6n7n
Q-score: 0.421

Gao Y, Cui Y, Fox T, Lin S, Wang H, de Val N, Zhou ZH, Yang W

Science (2019) 363 [ Pubmed: 30679383 DOI: doi:10.1126/science.aav7003 ]

Sample:

Dna primase/helicase (62 kDa, Protein from Enterobacteria phage T7)
Bacteriophage t7 gene product 4 (gp4) helicase primase dna complex i (Complex from Enterobacteria phage T7)
Magnesium ion (24 Da, Ligand)
Thymidine-5'-triphosphate (482 Da, Ligand)
Dna (5'-d(p*tp*tp*tp*tp*tp*tp*tp*tp*tp*tp*tp*tp*tp*tp*t)-3') (4 kDa, DNA from Enterobacteria phage T7)

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EMD-0381

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Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS2)

Release date: March 6, 2019
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6n9w
Q-score: 0.334

Gao Y, Cui Y, Fox T, Lin S, Wang H, de Val N, Zhou ZH, Yang W

Science (2019) 363 [ Pubmed: 30679383 DOI: doi:10.1126/science.aav7003 ]

Sample:

Dna primase/helicase (62 kDa, Protein from Enterobacteria phage T7)
Thymidine-5'-triphosphate (482 Da, Ligand)
Template (13 kDa, DNA from Enterobacteria phage T7)
Primer (1 kDa, RNA from Enterobacteria phage T7)
Gp5 dna polymerase binding to a and b subunits of gp4 primase-helicase hexamer complexed with trx, rna/dna hybrid, and incoming dttp (lags2) (Complex from Enterobacteria phage T7)
Magnesium ion (24 Da, Ligand)
Dna-directed dna polymerase (79 kDa, Protein from Enterobacteria phage T7)
Zinc ion (65 Da, Ligand)

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EMDB [3]

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