Cryo-EM structure of MrgD-Gi complex with beta-alanine
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7y12
Q-score: 0.519
Suzuki S, Iida M, Hiroaki Y, Tanaka K, Kawamoto A, Kato T, Oshima A
Commun Biol (2022) 5 pp. 707-707 [ Pubmed: 35840655 DOI: doi:10.1038/s42003-022-03668-3 ]
- Scfv16 (31 kDa, Protein from synthetic construct)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
- Beta-alanine bound mrgd-gi complex with the scfv16 (Complex from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Mus musculus)
- Beta-alanine (89 Da, Ligand)
- Subunit beta-1,subunit gamma-2 (Complex from synthetic construct)
- Palmitic acid (256 Da, Ligand)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (39 kDa, Protein from Mus musculus)
- Soluble cytochrome b562,mas-related g-protein coupled receptor member d (50 kDa, Protein from Homo sapiens)
- G(i) subunit alpha-1,mas-related g-protein coupled receptor member d (Complex from Mus musculus)
- Scfv16 (Complex)
Cryo-EM structure of apo-state MrgD-Gi complex (local)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7y13
Q-score: 0.512
Suzuki S, Iida M, Hiroaki Y, Tanaka K, Kawamoto A, Kato T, Oshima A
Commun Biol (2022) 5 pp. 707-707 [ DOI: doi:10.1038/s42003-022-03668-3 Pubmed: 35840655 ]
- Palmitic acid (256 Da, Ligand)
- Soluble cytochrome b562,mas-related g-protein coupled receptor member d (Complex from Homo sapiens)
- Water (18 Da, Ligand)
- Soluble cytochrome b562,mas-related g-protein coupled receptor member d (50 kDa, Protein from Homo sapiens)
Cryo-EM structure of MrgD-Gi complex with beta-alanine (local)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7y14
Q-score: 0.494
Suzuki S, Iida M, Hiroaki Y, Tanaka K, Kawamoto A, Kato T, Oshima A
Commun Biol (2022) 5 pp. 707-707 [ Pubmed: 35840655 DOI: doi:10.1038/s42003-022-03668-3 ]
- Soluble cytochrome b562,mas-related g-protein coupled receptor member d (50 kDa, Protein from Homo sapiens)
- Beta-alanine bound mrgd-gi complex with the scfv16 (Complex from Homo sapiens)
- Beta-alanine (89 Da, Ligand)
- Palmitic acid (256 Da, Ligand)
Cryo-EM structure of apo-state MrgD-Gi complex
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7y15
Q-score: 0.552
Suzuki S, Iida M, Hiroaki Y, Tanaka K, Kawamoto A, Kato T, Oshima A
Commun Biol (2022) 5 pp. 707-707 [ DOI: doi:10.1038/s42003-022-03668-3 Pubmed: 35840655 ]
- Mrgd-gi complex with the scfv16 (Complex from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Mus musculus)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (39 kDa, Protein from Mus musculus)
- Soluble cytochrome b562,mas-related g-protein coupled receptor member d (50 kDa, Protein from Homo sapiens)
- Palmitic acid (256 Da, Ligand)
- Scfv16 (31 kDa, Protein from synthetic construct)
- G(i) subunit alpha-1,mas-related g-protein coupled receptor member d (Complex from Mus musculus)
- Subunit beta-1,subunit gamma-2 (Complex from synthetic construct)
- Scfv16 (Complex)