CryoEM structure of Arabidopsis ROS1 in complex with TG mismatch dsDNA at 3.3 Angstroms resolution
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7yho
Q-score: 0.432
Du X, Yang Z, Xie G, Wang C, Zhang L, Yan K, Yang M, Li S, Zhu JK, Du J
Nat Plants (2023) 9 pp. 271-279 [ DOI: doi:10.1038/s41477-022-01322-8 Pubmed: 36624257 ]
- Ros1-tg mismatch dsdna complex (Complex)
- Sex-determining region y protein,dna glycosylase/ap lyase ros1 (86 kDa, Protein from Arabidopsis thaliana)
- Dna (40-mer) (12 kDa, DNA from Arabidopsis thaliana)
- Ros1 (Complex from Homo sapiens)
- Iron/sulfur cluster (351 Da, Ligand)
- Dna (40-mer) (12 kDa, DNA from Arabidopsis thaliana)
- Tg mismatch dsdna (Complex from Arabidopsis thaliana)
CryoEM structure of Arabidopsis ROS1 in complex with 5mC-dsDNA at 3.1 Angstroms resolution
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7yhp
Q-score: 0.526
Du X, Yang Z, Xie G, Wang C, Zhang L, Yan K, Yang M, Li S, Zhu JK, Du J
Nat Plants (2023) 9 pp. 271-279 [ DOI: doi:10.1038/s41477-022-01322-8 Pubmed: 36624257 ]
- 5mc dsdna (Complex from Arabidopsis thaliana)
- Dna (40-mer) (12 kDa, DNA from Arabidopsis thaliana)
- Sex-determining region y protein,repressor of silencing 1,dna glycosylase/ap lyase ros1 (86 kDa, Protein from Arabidopsis thaliana)
- Dna (40-mer) (12 kDa, DNA from Arabidopsis thaliana)
- Ros1-5mc dsdna complex (Complex)
- Ros1 (Complex from Homo sapiens)
- Iron/sulfur cluster (351 Da, Ligand)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7yhq
Q-score: 0.377
Du X, Yang Z, Xie G, Wang C, Zhang L, Yan K, Yang M, Li S, Zhu JK, Du J
Nat Plants (2023) 9 pp. 271-279 [ DOI: doi:10.1038/s41477-022-01322-8 Pubmed: 36624257 ]
- Iron/sulfur cluster (351 Da, Ligand)
- Dsdna (Complex from Arabidopsis thaliana)
- Ros1 (Complex from Homo sapiens)
- Sex-determining region y protein,dna glycosylase/ap lyase ros1 (86 kDa, Protein from Arabidopsis thaliana)
- Dna (40-mer) (12 kDa, DNA from Arabidopsis thaliana)
- Covalent-linked reaction intermediate of arabidopsis ros1 with dsdna (Complex)
- Dna (40-mer) (12 kDa, DNA from Arabidopsis thaliana)
The Structure of the moss PSI-LHCI reveals the evolution of the LHCI antenna
Resolution: 3.76 Å
EM Method: Single-particle
Fitted PDBs: 7ku5
Q-score: 0.387
Gorski C, Riddle R, Toporik H, Da Z, Dobson Z, Williams D, Mazor Y
Nat Plants (2022) 8 pp. 307-316 [ Pubmed: 35190662 DOI: doi:10.1038/s41477-022-01099-w ]
- Psi (Complex from Physcomitrium patens)
- Chlorophyll a (893 Da, Ligand)
- Psao (9 kDa, Protein from Physcomitrium patens)
- Beta-carotene (536 Da, Ligand)