Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8j74
Q-score: 0.44
Qiu Y, Gao Y, Huang B, Bai Q, Zhao Y
Nat Struct Mol Biol (2024) 31 pp. 701-709 [ Pubmed: 38589607 DOI: doi:10.1038/s41594-024-01259-w ]
- Cholesterol hemisuccinate (486 Da, Ligand)
- Lauryl maltose neopentyl glycol (1 kDa, Ligand)
- Human high-affinity choline transporter 1 (Complex from Homo sapiens)
- High affinity choline transporter 1 (63 kDa, Protein from Homo sapiens)
- Hexadecane (226 Da, Ligand)
- (2s,2's)-2,2'-biphenyl-4,4'-diylbis(2-hydroxy-4,4-dimethylmorpholin-4-ium) (414 Da, Ligand)
Cryo-EM structure of human TPH2 tetramer
Resolution: 3.09 Å
EM Method: Single-particle
Fitted PDBs: 7wiy
Q-score: 0.588
Zhu K, Liu C, Gao Y, Lu J, Wang D, Zhang H
Front Pharmacol (2022) 13 pp. 907437-907437 [ Pubmed: 36046836 DOI: doi:10.3389/fphar.2022.907437 ]
- Fe (iii) ion (55 Da, Ligand)
- Tryptophan 5-hydroxylase 2 (56 kDa, Protein from Homo sapiens)
- Imidazole (69 Da, Ligand)
- Complex of human tph2 with bound fe2+ and imidazole (Complex from Homo sapiens)
Cryo-EM structure of the S. typhimurium oxaloacetate decarboxylase beta-gamma sub-complex
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6iww
Q-score: 0.434
Xu X, Shi H, Gong X, Chen P, Gao Y, Zhang X, Xiang S
eLife (2020) 9 [ DOI: doi:10.7554/eLife.53853 Pubmed: 32459174 ]
- Oxaloacetate decarboxylase beta chain (44 kDa, Protein from Salmonella enterica subsp. enterica serovar Typhimurium)
- Probable oxaloacetate decarboxylase gamma chain (11 kDa, Protein from Salmonella enterica subsp. enterica serovar Typhimurium)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- The oxaloacetate decarboxylase beta-gamma sub-complex (Complex from Salmonella enterica subsp. enterica serovar Typhimurium)
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 6n7w
Q-score: 0.324
Gao Y, Cui Y, Fox T, Lin S, Wang H, de Val N, Zhou ZH, Yang W
Science (2019) 363 [ Pubmed: 30679383 DOI: doi:10.1126/science.aav7003 ]
- Dna-directed dna polymerase (79 kDa, Protein from Enterobacteria phage T7)
- Dna (25-mer) (7 kDa, DNA from Enterobacteria phage T7)
- Thymidine-5'-triphosphate (482 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Dna (77-mer) (23 kDa, DNA from Enterobacteria phage T7)
- Trxa (11 kDa, Protein from Escherichia coli)
- D5ae7a mutant gp5 dna polymerase complexed with trx, fork dna, and incoming dttp (from gp4-gp5 leading-strand complexes) (Complex from Enterobacteria phage T7)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6n9u
Q-score: 0.477
Gao Y, Cui Y, Fox T, Lin S, Wang H, de Val N, Zhou ZH, Yang W
Science (2019) 363 [ Pubmed: 30679383 DOI: doi:10.1126/science.aav7003 ]
- Dna primase/helicase (62 kDa, Protein from Enterobacteria phage T7)
- Thymidine-5'-triphosphate (482 Da, Ligand)
- Rna (5'-r(*ap*cp*cp*ap*g)-d(p*(doc))-3') (1 kDa, RNA from Enterobacteria phage T7)
- Magnesium ion (24 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Dna-directed dna polymerase (79 kDa, Protein from Enterobacteria phage T7)
- Gp5 dna polymerase and two gp4 primase subunits complexed with trx, rna/dna hybrid, and incoming dttp (from gp4-gp5 lagging-strand complex lags1) (Complex from Enterobacteria phage T7)
- Dna (44-mer) (13 kDa, DNA from Enterobacteria phage T7)