SARS-CoV-2 S NTD B.1.617.2 delta variant + S2L20 Local Refinement
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7soa
Q-score: 0.553
McCallum M, Walls AC, Sprouse KR, Bowen JE, Rosen LE, Dang HV, De Marco A, Franko N, Tilles SW, Logue J, Miranda MC, Ahlrichs M, Carter L, Snell G, Pizzuto MS, Chu HY, Van Voorhis WC, Corti D, Veesler D
Science (2021) 374 pp. 1621-1626 [ Pubmed: 34751595 DOI: doi:10.1126/science.abl8506 ]
- S2l20 fab light chain (11 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 s ntd b.1.617.2 delta variant + s2l20 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- S2l20 fab heavy chain (13 kDa, Protein from Homo sapiens)
SARS-CoV-2 S RBD B.1.617.1 kappa variant S309 Local Refinement
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7soc
Q-score: 0.541
McCallum M, Walls AC, Sprouse KR, Bowen JE, Rosen LE, Dang HV, De Marco A, Franko N, Tilles SW, Logue J, Miranda MC, Ahlrichs M, Carter L, Snell G, Pizzuto MS, Chu HY, Van Voorhis WC, Corti D, Veesler D
Science (2021) 374 pp. 1621-1626 [ Pubmed: 34751595 DOI: doi:10.1126/science.abl8506 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S309 fab light chain (11 kDa, Protein from Homo sapiens)
- S309 fab heavy chain (14 kDa, Protein from Homo sapiens)
- Sars-cov-2 s rbd b.1.617.1 kappa variant + s309 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 S NTD B.1.617.1 kappa variant S2L20 Local Refinement
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7sod
Q-score: 0.551
McCallum M, Walls AC, Sprouse KR, Bowen JE, Rosen LE, Dang HV, De Marco A, Franko N, Tilles SW, Logue J, Miranda MC, Ahlrichs M, Carter L, Snell G, Pizzuto MS, Chu HY, Van Voorhis WC, Corti D, Veesler D
Science (2021) 374 pp. 1621-1626 [ Pubmed: 34751595 DOI: doi:10.1126/science.abl8506 ]
- S2l20 fab light chain (11 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 s ntd b.1.617.1 kappa variant + s2l20 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- S2l20 fab heavy chain (13 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 S NTD B.1.617.1 kappa variant S2X303 Local Refinement
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7sof
Q-score: 0.461
McCallum M, Walls AC, Sprouse KR, Bowen JE, Rosen LE, Dang HV, De Marco A, Franko N, Tilles SW, Logue J, Miranda MC, Ahlrichs M, Carter L, Snell G, Pizzuto MS, Chu HY, Van Voorhis WC, Corti D, Veesler D
Science (2021) 374 pp. 1621-1626 [ Pubmed: 34751595 DOI: doi:10.1126/science.abl8506 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S2x303 fab heavy chain (13 kDa, Protein from Homo sapiens)
- Sars-cov-2 s ntd b.1.617.1 kappa variant + s2x303 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- S2x303 fab light chain (11 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 (Local Refinement of the NTD/S2L20)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7n8i
Q-score: 0.582
McCallum M, Bassi J, De Marco A, Chen A, Walls AC, Di Iulio J, Tortorici MA, Navarro MJ, Silacci-Fregni C, Saliba C, Sprouse KR, Agostini M, Pinto D, Culap K, Bianchi S, Jaconi S, Cameroni E, Bowen JE, Tilles SW, Pizzuto MS, Guastalla SB, Bona G, Pellanda AF, Garzoni C, Van Voorhis WC, Rosen LE, Snell G, Telenti A, Virgin HW, Piccoli L, Corti D, Veesler D
Science (2021) 373 pp. 648-654 [ Pubmed: 34210893 DOI: doi:10.1126/science.abi7994 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S2l20 fab light chain variable region (11 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 s (b.1.429 / epsilon variant) bound to s2l20 fab (Complex from Homo sapiens)
- S2l20 fab heavy chain variable region (13 kDa, Protein from Homo sapiens)