EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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initial_angle_assignment_type:"MAXIMUM LIKELIHOOD" AND xref_links:"pdb" AND assembly_molecular_weight:{100000 TO 250000] AND natural_source_ncbi_code:"83333" AND author_orcid:"0000-0003-4346-182x"

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EMDB [3]

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EMD-12256

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Structure of the autoinducer-2 exporter TqsA from E. coli

Release date: May 11, 2022
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7nb6
Q-score: 0.426

Khera R, Mehdipour AR, Bolla JR, Kahnt J, Welsch S, Ermler U, Muenke C, Robinson CV, Hummer G, Xie H, Michel H

EMBO J (2022) 41 pp. e109990-e109990 [ Pubmed: 35698912 DOI: doi:10.15252/embj.2021109990 ]

Sample:

Ai-2 transport protein tqsa (37 kDa, Protein from Escherichia coli (strain K12))
Pentameric tqsa (187 kDa, Complex from Escherichia coli)

EMD-13057

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Structure of the AI-2 exporter family protein YdiK from E. coli

Release date: May 11, 2022
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7ot9
Q-score: 0.499

Khera R, Mehdipour AR, Bolla JR, Kahnt J, Welsch S, Ermler U, Muenke C, Robinson CV, Hummer G, Xie H, Michel H

EMBO J (2022) 41 pp. e109990-e109990 [ Pubmed: 35698912 DOI: doi:10.15252/embj.2021109990 ]

Sample:

Ai-2e member ydik (39 kDa, Protein from Escherichia coli (strain K12))
Pentameric ydik (199 kDa, Complex from Escherichia coli (strain K12))

EMD-21900

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Cryo-EM structure of E. Coli OmpF

Release date: Jan. 20, 2021
Resolution: 3.15 Å
EM Method: Single-particle
Fitted PDBs: 6wtz
Q-score: 0.54

Su CC, Lyu M, Morgan CE, Bolla JR, Robinson CV, Yu EW

Nat Methods (2021) 18 pp. 69-75 [ DOI: doi:10.1038/s41592-020-01021-2 Pubmed: 33408407 ]

Sample:

Ompf (Complex from Escherichia coli K-12)
Water (18 Da, Ligand)
Outer membrane porin f (39 kDa, Protein from Escherichia coli (strain K12))

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EMDB [3]

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