Electron Microscopy Data Bank

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initial_angle_assignment_type:"MAXIMUM LIKELIHOOD" AND xref_links:"pdb" AND assembly_molecular_weight:{2000000 TO 5000000] AND author_orcid:"0000-0001-6546-2597" AND author_name:"Cui Z"

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EMD-23961

Download Map 3D View

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Release date: Feb. 2, 2022
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 7msc
Q-score: 0.556

Cui Z, Li X, Shin J, Gamper H, Hou YM, Sacchettini JC, Zhang J

Nat Commun (2022) 13 pp. 432-432 [ DOI: doi:10.1038/s41467-022-28078-1 Pubmed: 35064151 ]

Sample:

Mrna (8 kDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l14 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l25 (22 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l32 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s19 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l4 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l15 (15 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s7 (17 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l35 (7 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
5s rrna (37 kDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s5 (22 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s12 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l20 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s6 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l34 (5 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l22 (20 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s11 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Zinc ion (65 Da, Ligand)
50s ribosomal protein l2 (30 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s4 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l6 (19 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
The complex of mtb 70sic with mtbetta at pre-hydrolysis state (pre_r0) (Complex from Mycobacterium tuberculosis H37Rv)
30s ribosomal protein s3 (30 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s16 (17 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
50s ribosomal protein l23 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l36 (4 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l33 2 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l3 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Energy-dependent translational throttle protein etta (61 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s8 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s9 (16 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l17 (19 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l29 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l37 (2 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l18 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l31 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s18 1 (9 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l9 (16 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s20 (9 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Magnesium ion (24 Da, Ligand)
50s ribosomal protein l21 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s13 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
16s rrna (498 kDa, RNA from Mycobacterium tuberculosis H37Rv)
50s ribosomal protein l1 (24 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s17 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Initiator trna (met) (24 kDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s10 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l19 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l16 (15 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
23s rrna (1 MDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l27 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l28 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l30 (7 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l5 (21 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l13 (21 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s14 type z (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
N-formylmethionine (177 Da, Ligand)
50s ribosomal protein l24 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s15 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))

[Show more]

EMD-23969

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Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Release date: Feb. 2, 2022
Resolution: 2.79 Å
EM Method: Single-particle
Fitted PDBs: 7msm
Q-score: 0.561

Cui Z, Li X, Shin J, Gamper H, Hou YM, Sacchettini JC, Zhang J

Nat Commun (2022) 13 pp. 432-432 [ DOI: doi:10.1038/s41467-022-28078-1 Pubmed: 35064151 ]

Sample:

30s ribosomal protein s20 (9 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l22 (20 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l33 2 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s11 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Adenosine-5'-diphosphate (427 Da, Ligand)
50s ribosomal protein l24 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l29 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s5 (22 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l6 (19 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s9 (16 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l5 (21 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Initiator trna (met) (24 kDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Mrna (8 kDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
23s rrna (1 MDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l27 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l30 (7 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Vanadate ion (114 Da, Ligand)
30s ribosomal protein s18 1 (9 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s19 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l9 (16 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Magnesium ion (24 Da, Ligand)
N-formylmethionine (177 Da, Ligand)
50s ribosomal protein l17 (19 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s17 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l28 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s15 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l35 (7 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l25 (22 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l23 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s3 (30 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
The complex of mtb 70sic with mtbetta at atp-hydrolysis transition state (trans_r0) (Complex from Mycobacterium tuberculosis H37Rv)
30s ribosomal protein s7 (17 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l16 (15 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l18 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l37 (2 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l19 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l2 (30 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Energy-dependent translational throttle protein etta (61 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
16s rrna (498 kDa, RNA from Mycobacterium tuberculosis H37Rv)
30s ribosomal protein s4 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l36 (4 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l15 (15 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l4 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l20 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l21 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s12 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s13 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Zinc ion (65 Da, Ligand)
30s ribosomal protein s8 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l13 (21 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s16 (17 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s6 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l32 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l1 (24 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l31 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s14 type z (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l34 (5 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l14 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s10 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
5s rrna (37 kDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l3 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))

[Show more]

EMD-23972

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Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Release date: Feb. 2, 2022
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7msz
Q-score: 0.52

Cui Z, Li X, Shin J, Gamper H, Hou YM, Sacchettini JC, Zhang J

Nat Commun (2022) 13 pp. 432-432 [ DOI: doi:10.1038/s41467-022-28078-1 Pubmed: 35064151 ]

Sample:

Mrna (8 kDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l14 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l25 (22 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l32 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s19 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l4 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l15 (15 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Adenosine-5'-diphosphate (427 Da, Ligand)
30s ribosomal protein s7 (17 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l35 (7 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
5s rrna (37 kDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s5 (22 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
The complex of mtb 70sic with mtbetta at atp-hydrolysis transition state (trans_r1) (Complex from Mycobacterium tuberculosis H37Rv)
30s ribosomal protein s12 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l20 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s6 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l34 (5 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l22 (20 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s11 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Zinc ion (65 Da, Ligand)
50s ribosomal protein l2 (30 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s4 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l6 (19 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s3 (30 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s16 (17 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l23 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l36 (4 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l33 2 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l3 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Energy-dependent translational throttle protein etta (61 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s8 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s9 (16 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l17 (19 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l29 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l37 (2 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l18 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l31 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s18 1 (9 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l9 (16 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s20 (9 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Magnesium ion (24 Da, Ligand)
50s ribosomal protein l21 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s13 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
16s rrna (498 kDa, RNA from Mycobacterium tuberculosis H37Rv)
50s ribosomal protein l1 (24 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s17 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Initiator trna (met) (24 kDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s10 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l19 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l16 (15 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
23s rrna (1 MDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l27 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l28 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l30 (7 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l5 (21 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l13 (21 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s14 type z (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
N-formylmethionine (177 Da, Ligand)
50s ribosomal protein l24 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Vanadate ion (114 Da, Ligand)
30s ribosomal protein s15 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))

[Show more]

EMD-23975

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Mtb 70S with P/E tRNA

Release date: Feb. 2, 2022
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7mt3
Q-score: 0.536

Cui Z, Li X, Shin J, Gamper H, Hou YM, Sacchettini JC, Zhang J

Nat Commun (2022) 13 pp. 432-432 [ DOI: doi:10.1038/s41467-022-28078-1 Pubmed: 35064151 ]

Sample:

50s ribosomal protein l14 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l25 (22 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l32 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s19 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l4 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l15 (15 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s7 (17 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l35 (7 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
5s rrna (37 kDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s5 (22 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Mtb 70s with p/e trna (Complex from Mycobacterium tuberculosis H37Rv)
30s ribosomal protein s12 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l20 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s6 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Trna (met) (24 kDa, RNA from Escherichia coli)
50s ribosomal protein l34 (5 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l22 (20 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s11 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Zinc ion (65 Da, Ligand)
50s ribosomal protein l2 (30 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s4 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l6 (19 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s3 (30 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s16 (17 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l23 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l36 (4 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l33 2 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l3 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Mrna (8 kDa, RNA from Mycobacterium tuberculosis)
30s ribosomal protein s8 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s9 (16 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l17 (19 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l29 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l37 (2 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l18 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l31 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s18 1 (9 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l9 (16 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s20 (9 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Magnesium ion (24 Da, Ligand)
50s ribosomal protein l21 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s13 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
16s rrna (498 kDa, RNA from Mycobacterium tuberculosis H37Rv)
50s ribosomal protein l1 (24 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s17 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s10 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l19 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l16 (15 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
23s rrna (1 MDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l27 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l28 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l30 (7 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l5 (21 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l13 (21 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s14 type z (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l24 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s15 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))

[Show more]

EMD-23976

Download Map 3D View

Mtb 70S with P and E site tRNAs

Release date: Feb. 2, 2022
Resolution: 2.71 Å
EM Method: Single-particle
Fitted PDBs: 7mt7
Q-score: 0.554

Cui Z, Li X, Shin J, Gamper H, Hou YM, Sacchettini JC, Zhang J

Nat Commun (2022) 13 pp. 432-432 [ DOI: doi:10.1038/s41467-022-28078-1 Pubmed: 35064151 ]

Sample:

50s ribosomal protein l14 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l25 (22 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l32 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s19 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l4 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l15 (15 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s7 (17 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l35 (7 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
5s rrna (37 kDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s5 (22 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s12 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l20 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s6 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Trna (met) (24 kDa, RNA from Escherichia coli)
50s ribosomal protein l34 (5 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l22 (20 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Mtb 70s with p and e site trnas (Complex from Mycobacterium tuberculosis H37Rv)
30s ribosomal protein s11 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Zinc ion (65 Da, Ligand)
50s ribosomal protein l2 (30 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s4 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l6 (19 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s3 (30 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s16 (17 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l23 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l36 (4 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l33 2 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l3 (23 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Mrna (8 kDa, RNA from Mycobacterium tuberculosis)
30s ribosomal protein s8 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s9 (16 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l17 (19 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l29 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l37 (2 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l18 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l31 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s18 1 (9 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l9 (16 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s20 (9 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Magnesium ion (24 Da, Ligand)
50s ribosomal protein l21 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s13 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
16s rrna (498 kDa, RNA from Mycobacterium tuberculosis H37Rv)
50s ribosomal protein l1 (24 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s17 (14 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s10 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l19 (13 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l16 (15 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
23s rrna (1 MDa, RNA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l27 (8 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l28 (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l30 (7 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l5 (21 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
50s ribosomal protein l13 (21 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s14 type z (6 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
N-formylmethionine (177 Da, Ligand)
50s ribosomal protein l24 (11 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
30s ribosomal protein s15 (10 kDa, Protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))

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