EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

Edit your search query here and hit Return to execute it:

initial_angle_assignment_type:"MAXIMUM LIKELIHOOD" AND xref_links:"pdb" AND assembly_molecular_weight:{2000000 TO 5000000] AND author_orcid:"0000-0002-9527-210x" AND author_orcid:"0000-0003-4126-0725"

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Showing 1 - 3 of 3. Page 1 of 1

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EMDB [3]

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EMD-10180

Download Map 3D View

mt-SSU assemblosome of Trypanosoma brucei

Release date: Sept. 25, 2019
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6sgb
Q-score: 0.439

Saurer M, Ramrath DJF, Niemann M, Calderaro S, Prange C, Mattei S, Scaiola A, Leitner A, Bieri P, Horn EK, Leibundgut M, Boehringer D, Schneider A, Ban N

Science (2019) 365 pp. 1144-1149 [ DOI: doi:10.1126/science.aaw5570 Pubmed: 31515389 ]

Sample:

Mt-saf33 (16 kDa, Protein from Trypanosoma brucei brucei)
Ms63 (kripp16) (31 kDa, Protein from Trypanosoma brucei brucei)
Us17m (39 kDa, Protein from Trypanosoma brucei brucei)
Ms35 (98 kDa, Protein from Trypanosoma brucei brucei)
Us8m (32 kDa, Protein from Trypanosoma brucei brucei)
Unk-i (2 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf28 (21 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf18 (42 kDa, Protein from Trypanosoma brucei brucei)
Us5m (50 kDa, Protein from Trypanosoma brucei brucei)
Ms3m (9 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf17 (50 kDa, Protein from Trypanosoma brucei brucei)
Unk-l (1 kDa, Protein from Trypanosoma brucei brucei)
Unk-h (21 kDa, Protein from Trypanosoma brucei brucei)
Ms50 (131 kDa, Protein from Trypanosoma brucei brucei)
Unk-g (14 kDa, Protein from Trypanosoma brucei brucei)
Unk-c (869 Da, Protein from Trypanosoma brucei brucei)
Unk-o (2 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf30 (19 kDa, Protein from Trypanosoma brucei brucei)
Ms54 (72 kDa, Protein from Trypanosoma brucei brucei)
S-adenosyl-l-homocysteine (384 Da, Ligand)
Mt-saf10 (69 kDa, Protein from Trypanosoma brucei brucei)
Ms29 (57 kDa, Protein from Trypanosoma brucei brucei)
Ms51 (kripp1) (95 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf5 (86 kDa, Protein from Trypanosoma brucei brucei)
Ms57 (45 kDa, Protein from Trypanosoma brucei brucei)
Ms52 (84 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf2 (kripp2) (116 kDa, Protein from Trypanosoma brucei brucei)
Bs6m (18 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf29 (20 kDa, Protein from Trypanosoma brucei brucei)
Ms26 (51 kDa, Protein from Trypanosoma brucei brucei)
Unk-c (1 kDa, Protein from Trypanosoma brucei brucei)
Unk-i, unk-n (698 Da, Protein from Trypanosoma brucei brucei)
Mt-saf22 (kripp17) (39 kDa, Protein from Trypanosoma brucei brucei)
Ms70 (21 kDa, Protein from Trypanosoma brucei brucei)
Unk-f, unk-m (954 Da, Protein from Trypanosoma brucei brucei)
Unk-h (443 Da, Protein from Trypanosoma brucei brucei)
Mt-saf7 (kripp10) (76 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf16 (50 kDa, Protein from Trypanosoma brucei brucei)
Ms38 (28 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf34 (14 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf26 (30 kDa, Protein from Trypanosoma brucei brucei)
Us15m (50 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf14 (53 kDa, Protein from Trypanosoma brucei brucei)
Us14m (19 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf31 (17 kDa, Protein from Trypanosoma brucei brucei)
Ms68 (26 kDa, Protein from Trypanosoma brucei brucei)
Unk-d (5 kDa, Protein from Trypanosoma brucei brucei)
Unk-l (1 kDa, Protein from Trypanosoma brucei brucei)
Unk-a (4 kDa, Protein from Trypanosoma brucei brucei)
Ms58 (35 kDa, Protein from Trypanosoma brucei brucei)
Us10m (94 kDa, Protein from Trypanosoma brucei brucei)
Bs18m (36 kDa, Protein from Trypanosoma brucei brucei)
Ms55 (kripp8) (66 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf32 (16 kDa, Protein from Trypanosoma brucei brucei)
Unk-g (1 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf9 (69 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf3 (106 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf1 (rsm22) (119 kDa, Protein from Trypanosoma brucei brucei)
Guanosine-5'-triphosphate (523 Da, Ligand)
Mt-saf4 (91 kDa, Protein from Trypanosoma brucei brucei)
Ms53 (75 kDa, Protein from Trypanosoma brucei brucei)
Ms41 (22 kDa, Protein from Trypanosoma brucei brucei)
Unk-e (2 kDa, Protein from Trypanosoma brucei brucei)
Ms33 (21 kDa, Protein from Trypanosoma brucei brucei)
Ms62 (kripp14) (32 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf19 (41 kDa, Protein from Trypanosoma brucei brucei)
Us19m (28 kDa, Protein from Trypanosoma brucei brucei)
Unk-e, unk-p (3 kDa, Protein from Trypanosoma brucei brucei)
Ms22 (73 kDa, Protein from Trypanosoma brucei brucei)
Us11m (37 kDa, Protein from Trypanosoma brucei brucei)
Phosphate ion (94 Da, Ligand)
Zinc ion (65 Da, Ligand)
S-(2-{[n-(2-hydroxy-4-{[hydroxy(oxido)phosphino]oxy}-3,3-dimethylbutanoyl)-beta-alanyl]amino}ethyl) decanethioate (496 Da, Ligand)
Mt-saf24 (34 kDa, Protein from Trypanosoma brucei brucei)
Mt-ssu assemblosome (Complex from Trypanosoma brucei brucei)
Mt-saf23 (38 kDa, Protein from Trypanosoma brucei brucei)
Water (18 Da, Ligand)
Mt-saf15 (53 kDa, Protein from Trypanosoma brucei brucei)
Ms49 (137 kDa, Protein from Trypanosoma brucei brucei)
9s rrna (198 kDa, RNA from Trypanosoma brucei brucei)
Mt-saf13 (63 kDa, Protein from Trypanosoma brucei brucei)
Unk-d, unk-m, unk-q, unk-f (783 Da, Protein from Trypanosoma brucei brucei)
Ms71 (20 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf20 (40 kDa, Protein from Trypanosoma brucei brucei)
Unk-a (1 kDa, Protein from Trypanosoma brucei brucei)
Ms23 (35 kDa, Protein from Trypanosoma brucei brucei)
Ms65 (30 kDa, Protein from Trypanosoma brucei brucei)
Unk-j (1 kDa, Protein from Trypanosoma brucei brucei)
Unk-k (2 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf25 (29 kDa, Protein from Trypanosoma brucei brucei)
Ms69 (21 kDa, Protein from Trypanosoma brucei brucei)
Magnesium ion (24 Da, Ligand)
Ms34 (28 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf27 (kripp11) (26 kDa, Protein from Trypanosoma brucei brucei)
Ms59 (35 kDa, Protein from Trypanosoma brucei brucei)
Unk-y (39 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf12 (kripp18) (65 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf8 (76 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf21 (39 kDa, Protein from Trypanosoma brucei brucei)
Us9m (50 kDa, Protein from Trypanosoma brucei brucei)
Unk-b (3 kDa, Protein from Trypanosoma brucei brucei)
Ms56 (47 kDa, Protein from Trypanosoma brucei brucei)
Ms72 (19 kDa, Protein from Trypanosoma brucei brucei)
Bs16m (22 kDa, Protein from Trypanosoma brucei brucei)
Unk-j (1 kDa, Protein from Trypanosoma brucei brucei)
Ms67 (30 kDa, Protein from Trypanosoma brucei brucei)
Unk-x (9 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf11 (64 kDa, Protein from Trypanosoma brucei brucei)
Unk-b, unk-k (2 kDa, Protein from Trypanosoma brucei brucei)
Ms73 (11 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf6 (76 kDa, Protein from Trypanosoma brucei brucei)

[Show more]

EMD-10175

Download Map 3D View

Head domain of the mt-SSU assemblosome from Trypanosoma brucei

Release date: Sept. 18, 2019
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6sg9
Q-score: 0.461

Saurer M, Ramrath DJF, Niemann M, Calderaro S, Prange C, Mattei S, Scaiola A, Leitner A, Bieri P, Horn EK, Leibundgut M, Boehringer D, Schneider A, Ban N

Science (2019) 365 pp. 1144-1149 [ DOI: doi:10.1126/science.aaw5570 Pubmed: 31515389 ]

Sample:

Mt-saf28 (21 kDa, Protein from Trypanosoma brucei brucei)
Ms57 (45 kDa, Protein from Trypanosoma brucei brucei)
Cryo-em structure of the head domain of the mt-ssu assemblosome from trypanosoma brucei (Complex from Trypanosoma brucei brucei)
Mt-saf20 (40 kDa, Protein from Trypanosoma brucei brucei)
Ms35 (98 kDa, Protein from Trypanosoma brucei brucei)
Us19m (28 kDa, Protein from Trypanosoma brucei brucei)
Ms70 (21 kDa, Protein from Trypanosoma brucei brucei)
Unk-g (14 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf1 (rsm22) (119 kDa, Protein from Trypanosoma brucei brucei)
Unk-j (1 kDa, Protein from Trypanosoma brucei brucei)
Ms38 (28 kDa, Protein from Trypanosoma brucei brucei)
Unk-i (2 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf34 (14 kDa, Protein from Trypanosoma brucei brucei )
Mt-saf18 (42 kDa, Protein from Trypanosoma brucei brucei)
Ms50 (131 kDa, Protein from Trypanosoma brucei brucei)
Us5m (50 kDa, Protein from Trypanosoma brucei brucei)
Ms69 (21 kDa, Protein from Trypanosoma brucei brucei)
Unk-x (9 kDa, Protein from Trypanosoma brucei brucei)
S-adenosyl-l-homocysteine (384 Da, Ligand)
Magnesium ion (24 Da, Ligand)
Guanosine-5'-triphosphate (523 Da, Ligand)
Unk-k (2 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf19 (41 kDa, Protein from Trypanosoma brucei brucei )
Unk-h (21 kDa, Protein from Trypanosoma brucei brucei)
Us3m (9 kDa, Protein from Trypanosoma brucei brucei)
Us14m (19 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf16 (50 kDa, Protein from Trypanosoma brucei brucei)
Ms72 (19 kDa, Protein from Trypanosoma brucei brucei)
Unk-e (2 kDa, Protein from Trypanosoma brucei brucei)
Ms33 (21 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf15 (53 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf4 (91 kDa, Protein from Trypanosoma brucei brucei)
Unk-c (1 kDa, Protein from Trypanosoma brucei brucei)
Ms53 (75 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf12 (kripp18) (65 kDa, Protein from Trypanosoma brucei brucei)
Unk-f (783 Da, Protein from Trypanosoma brucei brucei)
Mt-saf14 (53 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf30 (19 kDa, Protein from Trypanosoma brucei brucei)
Ms49 (137 kDa, Protein from Trypanosoma brucei brucei)
Ms54 (72 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf25 (29 kDa, Protein from Trypanosoma brucei brucei)
Unk-a (5 kDa, Protein from Trypanosoma brucei brucei)
Ms29 (57 kDa, Protein from Trypanosoma brucei brucei)
Us9m (50 kDa, Protein from Trypanosoma brucei brucei)
Zinc ion (65 Da, Ligand)
Unk-d (5 kDa, Protein from Trypanosoma brucei brucei)
Us11m (37 kDa, Protein from Trypanosoma brucei brucei)
Unk-b (3 kDa, Protein from Trypanosoma brucei brucei)
Ms52 (84 kDa, Protein from Trypanosoma brucei brucei)
9s rrna (256 kDa, RNA from Trypanosoma brucei brucei)
Ms67 (30 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf17 (50 kDa, Protein from Trypanosoma brucei brucei)
Unk-l (1 kDa, Protein from Trypanosoma brucei brucei)
Water (18 Da, Ligand)
Ms58 (35 kDa, Protein from Trypanosoma brucei brucei)
Us10m (94 kDa, Protein from Trypanosoma brucei brucei)
Unk-m (954 Da, Protein from Trypanosoma brucei brucei)
Ms71 (20 kDa, Protein from Trypanosoma brucei brucei)
Ms55 (kripp8) (66 kDa, Protein from Trypanosoma brucei brucei)

[Show more]

EMD-10177

Download Map 3D View

Body domain of the mt-SSU assemblosome from Trypanosoma brucei

Release date: Sept. 18, 2019
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6sga
Q-score: 0.479

Saurer M, Ramrath DJF, Niemann M, Calderaro S, Prange C, Mattei S, Scaiola A, Leitner A, Bieri P, Horn EK, Leibundgut M, Boehringer D, Schneider A, Ban N

Science (2019) 365 pp. 1144-1149 [ DOI: doi:10.1126/science.aaw5570 Pubmed: 31515389 ]

Sample:

Mt-saf32 (16 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf33 (16 kDa, Protein from Trypanosoma brucei brucei)
Ms63 (kripp16) (31 kDa, Protein from Trypanosoma brucei brucei)
Us17m (39 kDa, Protein from Trypanosoma brucei brucei)
Unk-a (1 kDa, Protein from Trypanosoma brucei brucei)
Ms23 (35 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf9 (69 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf22 (kripp17) (39 kDa, Protein from Trypanosoma brucei brucei)
Unk-g (1 kDa, Protein from Trypanosoma brucei brucei)
Unk-i (39 kDa, Protein from Trypanosoma brucei brucei)
Ms65 (30 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf3 (106 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf1 (rsm22) (119 kDa, Protein from Trypanosoma brucei brucei)
Us8m (32 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf28 (21 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf18 (42 kDa, Protein from Trypanosoma brucei brucei)
Unk-h (443 Da, Protein from Trypanosoma brucei brucei)
Us5m (50 kDa, Protein from Trypanosoma brucei brucei)
Ms41 (22 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf13 (63 kDa, Protein from Trypanosoma brucei brucei)
Magnesium ion (24 Da, Ligand)
Ms34 (28 kDa, Protein from Trypanosoma brucei brucei)
Unk-l (1 kDa, Protein from Trypanosoma brucei brucei)
9s rrna (151 kDa, RNA from Trypanosoma brucei brucei)
Mt-saf27 (26 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf7 (kripp10) (76 kDa, Protein from Trypanosoma brucei brucei)
Ms38 (28 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf26 (30 kDa, Protein from Trypanosoma brucei brucei)
Unk-i, unk-m (698 Da, Protein from Trypanosoma brucei brucei)
Us15m (50 kDa, Protein from Trypanosoma brucei brucei)
Ms59 (35 kDa, Protein from Trypanosoma brucei brucei)
Ms62 (kripp14) (32 kDa, Protein from Trypanosoma brucei brucei)
Unk-c (869 Da, Protein from Trypanosoma brucei brucei)
Unk-e, unk-p (3 kDa, Protein from Trypanosoma brucei brucei)
Unk-o (2 kDa, Protein from Trypanosoma brucei brucei)
Zinc ion (65 Da, Ligand)
Ms22 (73 kDa, Protein from Trypanosoma brucei brucei)
Us11m (37 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf8 (76 kDa, Protein from Trypanosoma brucei brucei)
Body domain of the mt-ssu assemblosome (Complex from Trypanosoma brucei brucei)
Mt-saf30 (19 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf21 (39 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf14 (53 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf10 (69 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf31 (17 kDa, Protein from Trypanosoma brucei brucei)
Phosphate ion (94 Da, Ligand)
Ms68 (26 kDa, Protein from Trypanosoma brucei brucei)
Ms51 (kripp1) (95 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf5 (86 kDa, Protein from Trypanosoma brucei brucei)
Unk-b (2 kDa, Protein from Trypanosoma brucei brucei)
Ms56 (47 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf24 (34 kDa, Protein from Trypanosoma brucei brucei)
Unk-d, unk-m, unk-q (783 Da, Protein from Trypanosoma brucei brucei)
Unk-f (954 Da, Protein from Trypanosoma brucei brucei)
Unk-u (2 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf2 (kripp2) (116 kDa, Protein from Trypanosoma brucei brucei)
Bs16m (22 kDa, Protein from Trypanosoma brucei brucei)
Unk-j (1 kDa, Protein from Trypanosoma brucei brucei)
S-(2-{[n-(2-hydroxy-4-{[hydroxy(oxido)phosphino]oxy}-3,3-dimethylbutanoyl)-beta-alanyl]amino}ethyl) decanethioate (496 Da, Ligand)
Bs6m (18 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf23 (38 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf11 (64 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf29 (20 kDa, Protein from Trypanosoma brucei brucei)
Ms73 (11 kDa, Protein from Trypanosoma brucei brucei)
Mt-saf6 (76 kDa, Protein from Trypanosoma brucei brucei)
Ms26 (51 kDa, Protein from Trypanosoma brucei brucei)
Bs18m (36 kDa, Protein from Trypanosoma brucei brucei)

[Show more]

Sort by: Download

Showing 1 - 3 of 3. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [3]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: