Rabbit RyR1 with AMP-PCP and high Ca2+ embedded in nanodisc in inactivated conformation (Dataset-A)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7tdg
Q-score: 0.386
eLife (2022) 11 [ Pubmed: 35257661 DOI: doi:10.7554/eLife.75568 ]
- (2s)-3-(hexadecanoyloxy)-2-[(9z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate (760 Da, Ligand)
- Rabbit ryr1 with amp-pcp and high ca2+ in nanodisc (2 MDa, Complex from Oryctolagus cuniculus)
- Calcium ion (40 Da, Ligand)
- Phosphomethylphosphonic acid adenylate ester (505 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Ryanodine receptor 1,ryr1 (533 kDa, Protein from rabbit)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7tdi
Q-score: 0.332
eLife (2022) 11 [ Pubmed: 35257661 DOI: doi:10.7554/eLife.75568 ]
- Rabbit ryr1 with amp-pcp and high ca2+ in nanodisc (2 MDa, Complex from Oryctolagus cuniculus)
- Ryanodine receptor 1,ryanodine receptor 1,ryr1 (533 kDa, Protein from rabbit)
- Calcium ion (40 Da, Ligand)
- Phosphomethylphosphonic acid adenylate ester (505 Da, Ligand)
- Zinc ion (65 Da, Ligand)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7tdj
Q-score: 0.365
eLife (2022) 11 [ Pubmed: 35257661 DOI: doi:10.7554/eLife.75568 ]
- Rabbit ryr1 with amp-pcp and high ca2+ in nanodisc (2 MDa, Complex from Oryctolagus cuniculus)
- Water (18 Da, Ligand)
- Ryanodine receptor 1,ryanodine receptor 1,ryr1 (533 kDa, Protein from rabbit)
- Calcium ion (40 Da, Ligand)
- Phosphomethylphosphonic acid adenylate ester (505 Da, Ligand)
- Zinc ion (65 Da, Ligand)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7tdk
Q-score: 0.357
eLife (2022) 11 [ Pubmed: 35257661 DOI: doi:10.7554/eLife.75568 ]
- Rabbit ryr1 with amp-pcp and high ca2+ in nanodisc (2 MDa, Complex from Oryctolagus cuniculus)
- Ryanodine receptor 1,ryanodine receptor 1,ryr1 (533 kDa, Protein from rabbit)
- Calcium ion (40 Da, Ligand)
- Phosphomethylphosphonic acid adenylate ester (505 Da, Ligand)
- Zinc ion (65 Da, Ligand)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6w6l
Q-score: 0.291
McGilvray PT, Anghel SA, Sundaram A, Zhong F, Trnka MJ, Fuller JR, Hu H, Burlingame AL, Keenan RJ
eLife (2020) 9 [ Pubmed: 32820719 DOI: doi:10.7554/eLife.56889 ]
- 60s ribosomal protein l18a (Complex from Homo sapiens)
- 40s ribosomal protein s28 (Complex from Homo sapiens)
- 40s ribosomal protein s30 (Complex from Homo sapiens)
- 60s ribosomal protein l7 (Complex from Homo sapiens)
- 40s ribosomal protein s26 (Complex from Homo sapiens)
- 40s ribosomal protein s21 (Complex from Homo sapiens)
- 60s ribosomal protein l24 (Complex from Homo sapiens)
- 40s ribosomal protein s16 (Complex from Homo sapiens)
- 40s ribosomal protein s9 (Complex from Homo sapiens)
- 60s ribosomal protein l18 (Complex from Homo sapiens)
- 40s ribosomal protein s4, x isoform (Complex from Homo sapiens)
- 40s ribosomal protein s10 (Complex from Homo sapiens)
- 60s ribosomal protein l10a (Complex from Homo sapiens)
- 40s ribosomal protein s18 (Complex from Homo sapiens)
- 60s ribosomal protein l17 (Complex from Homo sapiens)
- 40s ribosomal protein s23 (Complex from Homo sapiens)
- 40s ribosomal protein s25 (Complex from Homo sapiens)
- 60s ribosomal protein l11 (Complex from Homo sapiens)
- 60s ribosomal protein l3 (Complex from Homo sapiens)
- 40s ribosomal protein s7 (Complex from Homo sapiens)
- Nomo-nicalin-tmem147 complex (228 kDa, Complex from Homo sapiens)
- 60s ribosomal protein l27a (Complex from Homo sapiens)
- 40s ribosomal protein s6 (Complex from Homo sapiens)
- 60s ribosomal protein l9 (Complex from Homo sapiens)
- Translocon (376 kDa, Complex from Homo sapiens)
- 40s ribosomal protein s14 (Complex from Homo sapiens)
- 40s ribosomal protein s5 (Complex from Homo sapiens)
- 40s ribosomal protein s12 (Complex from Homo sapiens)
- 60s ribosomal protein l30 (Complex from Homo sapiens)
- 60s ribosomal protein l14 (Complex from Homo sapiens)
- 60s ribosomal protein l23 (Complex from Homo sapiens)
- 60s ribosomal protein l23a (Complex from Homo sapiens)
- 60s ribosomal protein l36a (Complex from Homo sapiens)
- 40s ribosomal protein s15a (Complex from Homo sapiens)
- 60s ribosomal protein l27 (Complex from Homo sapiens)
- 40s subunit (1 MDa, Complex from Homo sapiens)
- 60s acidic ribosomal protein p1 (Complex from Homo sapiens)
- 60s ribosomal protein l22 (Complex from Homo sapiens)
- 60s ribosomal protein l31 (Complex from Homo sapiens)
- 40s ribosomal protein s3a (Complex from Homo sapiens)
- 60s ribosomal protein l19 (Complex from Homo sapiens)
- Tmco1 (21 kDa, Complex from Homo sapiens)
- 40s ribosomal protein s24 (Complex from Homo sapiens)
- 60s subunit (2 MDa, Complex from Homo sapiens)
- 40s ribosomal protein s2 (Complex from Homo sapiens)
- 60s ribosomal protein l7a (Complex from Homo sapiens)
- 60s ribosomal protein l6 (Complex from Homo sapiens)
- 60s ribosomal protein l34 (Complex from Homo sapiens)
- 60s ribosomal protein l35 (Complex from Homo sapiens)
- 40s ribosomal protein sa (Complex from Homo sapiens)
- 60s ribosomal protein l10 (Complex from Homo sapiens)
- 40s ribosomal protein s15 (Complex from Homo sapiens)
- 60s acidic ribosomal protein p0 (Complex from Homo sapiens)
- 60s ribosomal protein l5 (Complex from Homo sapiens)
- 60s ribosomal protein l38 (Complex from Homo sapiens)
- 60s ribosomal protein l28 (Complex from Homo sapiens)
- 60s acidic ribosomal protein p2 (Complex from Homo sapiens)
- 40s ribosomal protein s3 (Complex from Homo sapiens)
- 40s ribosomal protein s8 (Complex from Homo sapiens)
- 60s ribosomal protein l8 (Complex from Homo sapiens)
- 40s ribosomal protein s29 (Complex from Homo sapiens)
- 60s ribosomal protein l32 (Complex from Homo sapiens)
- Sec61 complex (70 kDa, Complex from Homo sapiens)
- 60s ribosomal protein l13a (Complex from Homo sapiens)
- 60s ribosomal protein l12 (Complex from Homo sapiens)
- 60s ribosomal protein l39 (Complex from Homo sapiens)
- 60s ribosomal protein l15 (Complex from Homo sapiens)
- 40s ribosomal protein s19 (Complex from Homo sapiens)
- 40s ribosomal protein s13 (Complex from Homo sapiens)
- Ccdc47 (56 kDa, Complex from Homo sapiens)
- Native complex of a translating ribosome and a novel translocon containing the sec61 complex, tmem147, nomo, nicalin, ccdc47, and tmco1. (3 MDa, Complex from Homo sapiens)
- 60s ribosomal protein l21 (Complex from Homo sapiens)
- 40s ribosomal protein s20 (Complex from Homo sapiens)
- 60s ribosomal protein l35a (Complex from Homo sapiens)
- 60s ribosomal protein l36 (Complex from Homo sapiens)
- 60s ribosomal protein l26 (Complex from Homo sapiens)
- 40s ribosomal protein s27 (Complex from Homo sapiens)
- 40s ribosomal protein s17 (Complex from Homo sapiens)
- 40s ribosomal protein s27-like (Complex from Homo sapiens)
- 40s ribosomal protein s11 (Complex from Homo sapiens)
- 60s ribosomal protein l4 (Complex from Homo sapiens)
- 60s ribosomal protein l37a (Complex from Homo sapiens)
- 60s ribosomal protein l13 (Complex from Homo sapiens)
Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6mtb
Q-score: 0.468
Brown A, Baird MR, Yip MC, Murray J, Shao S
eLife (2018) 7 [ Pubmed: 30355441 DOI: doi:10.7554/eLife.40486 ]
- 60s ribosomal protein l18 (21 kDa, Protein from Rabbit)
- 60s ribosomal protein l4 (41 kDa, Protein from Rabbit)
- 40s ribosomal protein s18 (16 kDa, Protein from Rabbit)
- 60s ribosomal protein l8 (26 kDa, Protein from Rabbit)
- 40s ribosomal protein s15 (14 kDa, Protein from Rabbit)
- 60s ribosomal protein l14 (16 kDa, Protein from Rabbit)
- 40s ribosomal protein s9 (21 kDa, Protein from Rabbit)
- 40s ribosomal protein s23 (15 kDa, Protein from Rabbit)
- 40s ribosomal protein s27a (7 kDa, Protein from Rabbit)
- 60s ribosomal protein l23 (13 kDa, Protein from Rabbit)
- 60s ribosomal protein l6 (33 kDa, Protein from Rabbit)
- 40s ribosomal protein s20 (11 kDa, Protein from Rabbit)
- 60s ribosomal protein l19 (21 kDa, Protein from Rabbit)
- 40s ribosomal protein s30 (6 kDa, Protein from Rabbit)
- 40s ribosomal protein s28 (7 kDa, Protein from Rabbit)
- 40s ribosomal protein s26 (11 kDa, Protein from Rabbit)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Rabbit)
- 60s ribosomal protein l7a (36 kDa, Protein from Rabbit)
- 40s ribosomal protein s7 (22 kDa, Protein from Rabbit)
- 40s ribosomal protein s15a (14 kDa, Protein from Rabbit)
- 60s ribosomal protein l35a (12 kDa, Protein from Rabbit)
- 40s ribosomal protein s6 (27 kDa, Protein from Rabbit)
- 60s ribosomal protein l26 (15 kDa, Protein from Rabbit)
- 28s rrna (1 MDa, RNA from Rabbit)
- 60s ribosomal protein l11 (20 kDa, Protein from Rabbit)
- 60s ribosomal protein l39 (6 kDa, Protein from Rabbit)
- 40s ribosomal protein s2 (24 kDa, Protein from Rabbit)
- 40s ribosomal protein s17 (15 kDa, Protein from Rabbit)
- 40s ribosomal protein s25 (8 kDa, Protein from Rabbit)
- 60s ribosomal protein l31 (12 kDa, Protein from Rabbit)
- 40s ribosomal protein s5 (22 kDa, Protein from Rabbit)
- 40s ribosomal protein s10 (11 kDa, Protein from Rabbit)
- 60s ribosomal protein l17 (17 kDa, Protein from Rabbit)
- 40s ribosomal protein s11 (18 kDa, Protein from Rabbit)
- 60s ribosomal protein l18a (20 kDa, Protein from Rabbit)
- 60s ribosomal protein l5 (34 kDa, Protein from Rabbit)
- 60s ribosomal protein l30 (10 kDa, Protein from Rabbit)
- 40s ribosomal protein s27 (9 kDa, Protein from Rabbit)
- 60s ribosomal protein l15 (24 kDa, Protein from Rabbit)
- P-site trna (24 kDa, RNA from Rabbit)
- 40s ribosomal protein s12 (13 kDa, Protein from Rabbit)
- 60s ribosomal protein l24 (17 kDa, Protein from Rabbit)
- 40s ribosomal protein s21 (9 kDa, Protein from Rabbit)
- 60s ribosomal protein l3 (45 kDa, Protein from Rabbit)
- 18s rrna (548 kDa, RNA from Rabbit)
- 60s ribosomal protein l41 (3 kDa, Protein from Rabbit)
- 60s ribosomal protein l23a (13 kDa, Protein from Rabbit)
- 5.8s rrna (48 kDa, RNA from Rabbit)
- 40s ribosomal protein s19 (15 kDa, Protein from Rabbit)
- Receptor of activated protein c kinase 1 (34 kDa, Protein from Rabbit)
- 40s ribosomal protein s29 (6 kDa, Protein from Rabbit)
- Z-site trna (24 kDa, RNA from Rabbit)
- 60s ribosomal protein l34 (12 kDa, Protein from Rabbit)
- 40s ribosomal protein s16 (16 kDa, Protein from Rabbit)
- 60s ribosomal protein l37a (10 kDa, Protein from Rabbit)
- 40s ribosomal protein s13 (17 kDa, Protein from Rabbit)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l36a (12 kDa, Protein from Rabbit)
- 60s ribosomal protein l10a (23 kDa, Protein from Rabbit)
- 40s ribosomal protein s3a (24 kDa, Protein from Rabbit)
- 60s ribosomal protein l13a (23 kDa, Protein from Rabbit)
- 60s ribosomal protein l40 (6 kDa, Protein from Rabbit)
- 60s ribosomal protein l38 (8 kDa, Protein from Rabbit)
- 40s ribosomal protein s14 (14 kDa, Protein from Rabbit)
- 60s ribosomal protein l36 (11 kDa, Protein from Rabbit)
- 60s ribosomal protein l37 (10 kDa, Protein from Rabbit)
- 60s ribosomal protein l28 (14 kDa, Protein from Rabbit)
- Rabbit 80s ribosome with a p- and z-site trna (unrotated state) (Complex from Oryctolagus cuniculus)
- 60s ribosomal protein l35 (14 kDa, Protein from Rabbit)
- 60s ribosomal protein l27a (16 kDa, Protein from Rabbit)
- 40s ribosomal protein sa (24 kDa, Protein from Rabbit)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l21 (18 kDa, Protein from Rabbit)
- 40s ribosomal protein s24 (14 kDa, Protein from Rabbit)
- Mrna (2 kDa, RNA from unidentified)
- 40s ribosomal protein s8 (24 kDa, Protein from Rabbit)
- 60s ribosomal protein l22 (11 kDa, Protein from Rabbit)
- 5s rrna (38 kDa, RNA from Rabbit)
- 60s ribosomal protein l13 (24 kDa, Protein from Rabbit)
- 60s ribosomal protein l29 (26 kDa, Protein from Rabbit)
- 60s ribosomal protein l27 (15 kDa, Protein from Rabbit)
- 60s ribosomal protein l32 (15 kDa, Protein from Rabbit)
- 60s ribosomal protein l10 (24 kDa, Protein from Rabbit)
- 60s ribosomal protein l7 (29 kDa, Protein from Rabbit)
- 40s ribosomal protein s3 (25 kDa, Protein from Rabbit)
- 60s ribosomal protein l9 (21 kDa, Protein from Rabbit)
Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6mtc
Q-score: 0.497
Brown A, Baird MR, Yip MC, Murray J, Shao S
eLife (2018) 7 [ DOI: doi:10.7554/eLife.40486 Pubmed: 30355441 ]
- 60s ribosomal protein l8 (26 kDa, Protein from Rabbit)
- 40s ribosomal protein s21 (9 kDa, Protein from Rabbit)
- 60s ribosomal protein l22 (11 kDa, Protein from Rabbit)
- 60s ribosomal protein l10a (23 kDa, Protein from Rabbit)
- 60s ribosomal protein l17 (17 kDa, Protein from Rabbit)
- 40s ribosomal protein s6 (27 kDa, Protein from Rabbit)
- 60s ribosomal protein l36 (11 kDa, Protein from Rabbit)
- 60s ribosomal protein l30 (10 kDa, Protein from Rabbit)
- 40s ribosomal protein s18 (16 kDa, Protein from Rabbit)
- 40s ribosomal protein s19 (15 kDa, Protein from Rabbit)
- 40s ribosomal protein sa (24 kDa, Protein from Rabbit)
- 60s ribosomal protein l34 (12 kDa, Protein from Rabbit)
- Z-site trna (24 kDa, RNA from Rabbit)
- 40s ribosomal protein s10 (11 kDa, Protein from Rabbit)
- 60s ribosomal protein l11 (19 kDa, Protein from Rabbit)
- 60s ribosomal protein l41 (3 kDa, Protein from Rabbit)
- 40s ribosomal protein s14 (14 kDa, Protein from Rabbit)
- 40s ribosomal protein s15a (14 kDa, Protein from Rabbit)
- 40s ribosomal protein s15 (14 kDa, Protein from Rabbit)
- 40s ribosomal protein s7 (22 kDa, Protein from Rabbit)
- 40s ribosomal protein s3a (24 kDa, Protein from Rabbit)
- 60s ribosomal protein l23 (13 kDa, Protein from Rabbit)
- 60s ribosomal protein l40 (6 kDa, Protein from Rabbit)
- 40s ribosomal protein s12 (13 kDa, Protein from Rabbit)
- 40s ribosomal protein s23 (15 kDa, Protein from Rabbit)
- 28s rrna (1 MDa, RNA from Rabbit)
- 40s ribosomal protein s3 (25 kDa, Protein from Rabbit)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Rabbit)
- 40s ribosomal protein s9 (21 kDa, Protein from Rabbit)
- Receptor of activated protein c kinase 1 (34 kDa, Protein from Rabbit)
- 40s ribosomal protein s2 (24 kDa, Protein from Rabbit)
- 60s ribosomal protein l3 (45 kDa, Protein from Rabbit)
- 60s ribosomal protein l5 (34 kDa, Protein from Rabbit)
- 40s ribosomal protein s8 (24 kDa, Protein from Rabbit)
- 40s ribosomal protein s28 (7 kDa, Protein from Rabbit)
- Rabbit 80s ribosome with z-site trna and ifrd2 (Complex from Oryctolagus cuniculus)
- 60s ribosomal protein l7 (26 kDa, Protein from Rabbit)
- 60s ribosomal protein l24 (17 kDa, Protein from Rabbit)
- 60s ribosomal protein l36a (12 kDa, Protein from Rabbit)
- 60s ribosomal protein l9 (21 kDa, Protein from Rabbit)
- 60s ribosomal protein l38 (8 kDa, Protein from Rabbit)
- 60s ribosomal protein l4 (41 kDa, Protein from Rabbit)
- 40s ribosomal protein s16 (16 kDa, Protein from Rabbit)
- 40s ribosomal protein s26 (11 kDa, Protein from Rabbit)
- 60s ribosomal protein l29 (26 kDa, Protein from Rabbit)
- 60s ribosomal protein l19 (21 kDa, Protein from Rabbit)
- 40s ribosomal protein s13 (17 kDa, Protein from Rabbit)
- 5s rrna (38 kDa, RNA from Rabbit)
- 40s ribosomal protein s11 (18 kDa, Protein from Rabbit)
- 5.8s rrna (48 kDa, RNA from Rabbit)
- 60s ribosomal protein l18 (21 kDa, Protein from Rabbit)
- 60s ribosomal protein l23a (13 kDa, Protein from Rabbit)
- 40s ribosomal protein s5 (22 kDa, Protein from Rabbit)
- 40s ribosomal protein s20 (11 kDa, Protein from Rabbit)
- 40s ribosomal protein s27a (7 kDa, Protein from Rabbit)
- 60s ribosomal protein l21 (18 kDa, Protein from Rabbit)
- 60s ribosomal protein l13 (24 kDa, Protein from Rabbit)
- 40s ribosomal protein s27 (9 kDa, Protein from Rabbit)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l15 (24 kDa, Protein from Rabbit)
- 60s ribosomal protein l7a (36 kDa, Protein from Rabbit)
- 60s ribosomal protein l35a (12 kDa, Protein from Rabbit)
- 60s ribosomal protein l14 (16 kDa, Protein from Rabbit)
- 60s ribosomal protein l31 (12 kDa, Protein from Rabbit)
- 60s ribosomal protein l35 (14 kDa, Protein from Rabbit)
- 60s ribosomal protein l6 (33 kDa, Protein from Rabbit)
- 40s ribosomal protein s30 (6 kDa, Protein from Rabbit)
- 60s ribosomal protein l27 (15 kDa, Protein from Rabbit)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s25 (8 kDa, Protein from Rabbit)
- 60s ribosomal protein l18a (20 kDa, Protein from Rabbit)
- 60s ribosomal protein l10 (24 kDa, Protein from Rabbit)
- 60s ribosomal protein l39 (6 kDa, Protein from Rabbit)
- 60s ribosomal protein l32 (15 kDa, Protein from Rabbit)
- 60s ribosomal protein l37 (10 kDa, Protein from Rabbit)
- 40s ribosomal protein s24 (14 kDa, Protein from Rabbit)
- 60s ribosomal protein l26 (15 kDa, Protein from Rabbit)
- 40s ribosomal protein s17 (15 kDa, Protein from Rabbit)
- 60s ribosomal protein l13a (23 kDa, Protein from Rabbit)
- 40s ribosomal protein s29 (6 kDa, Protein from Rabbit)
- 60s ribosomal protein l37a (10 kDa, Protein from Rabbit)
- 60s ribosomal protein l28 (14 kDa, Protein from Rabbit)
- 18s rrna (548 kDa, RNA from Rabbit)
- Interferon-related developmental regulator 2 (47 kDa, Protein from Rabbit)
- 60s ribosomal protein l27a (16 kDa, Protein from Rabbit)
Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6mtd
Q-score: 0.486
Brown A, Baird MR, Yip MC, Murray J, Shao S
eLife (2018) 7 [ Pubmed: 30355441 DOI: doi:10.7554/eLife.40486 ]
- El34 (12 kDa, Protein from Rabbit)
- Ul6 (21 kDa, Protein from Rabbit)
- El22 (11 kDa, Protein from Rabbit)
- Es28 (7 kDa, Protein from Rabbit)
- Es12 (13 kDa, Protein from Rabbit)
- Es24 (14 kDa, Protein from Rabbit)
- Es31 (7 kDa, Protein from Rabbit)
- 18s rrna (548 kDa, RNA from Rabbit)
- Us17 (18 kDa, Protein from Rabbit)
- Ul14 (13 kDa, Protein from Rabbit)
- El30 (10 kDa, Protein from Rabbit)
- El11 (16 kDa, Protein from Rabbit)
- Ul24 (15 kDa, Protein from Rabbit)
- Ul5 (19 kDa, Protein from Rabbit)
- El24 (17 kDa, Protein from Rabbit)
- El38 (8 kDa, Protein from Rabbit)
- Ul29 (14 kDa, Protein from Rabbit)
- Us4 (21 kDa, Protein from Rabbit)
- El14 (16 kDa, Protein from Rabbit)
- Es26 (11 kDa, Protein from Rabbit)
- 28s rrna (1 MDa, RNA from Rabbit)
- Us3 (25 kDa, Protein from Rabbit)
- Us8 (14 kDa, Protein from Rabbit)
- Ul22 (17 kDa, Protein from Rabbit)
- El43 (10 kDa, Protein from Rabbit)
- Ul2 (26 kDa, Protein from Rabbit)
- Es7 (22 kDa, Protein from Rabbit)
- Eef2 (93 kDa, Protein from Rabbit)
- Es6 (27 kDa, Protein from Rabbit)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Us5 (24 kDa, Protein from Rabbit)
- Rack1 (34 kDa, Protein from Rabbit)
- El15 (24 kDa, Protein from Rabbit)
- El20 (20 kDa, Protein from Rabbit)
- Rabbit 80s ribosome with eef2 and serbp1 (unrotated state with head swivel) (Complex from Oryctolagus cuniculus)
- Ul1 (23 kDa, Protein from Rabbit)
- El39 (6 kDa, Protein from Rabbit)
- Es27 (9 kDa, Protein from Rabbit)
- Ul30 (26 kDa, Protein from Rabbit)
- Ul4 (41 kDa, Protein from Rabbit)
- Us14 (6 kDa, Protein from Rabbit)
- Es10 (11 kDa, Protein from Rabbit)
- El40 (6 kDa, Protein from Rabbit)
- Ul3 (45 kDa, Protein from Rabbit)
- Us11 (14 kDa, Protein from Rabbit)
- Es4 (29 kDa, Protein from Rabbit)
- Us9 (16 kDa, Protein from Rabbit)
- El13 (24 kDa, Protein from Rabbit)
- Es30 (6 kDa, Protein from Rabbit)
- Ul10 (21 kDa, Protein from Rabbit)
- 5.8s rrna (48 kDa, RNA from Rabbit)
- El31 (12 kDa, Protein from Rabbit)
- Us12 (15 kDa, Protein from Rabbit)
- Es8 (24 kDa, Protein from Rabbit)
- Us15 (17 kDa, Protein from Rabbit)
- Ul18 (34 kDa, Protein from Rabbit)
- El29 (26 kDa, Protein from Rabbit)
- Magnesium ion (24 Da, Ligand)
- El33 (12 kDa, Protein from Rabbit)
- Ul16 (24 kDa, Protein from Rabbit)
- Us10 (11 kDa, Protein from Rabbit)
- Es1 (24 kDa, Protein from Rabbit)
- Us7 (22 kDa, Protein from Rabbit)
- Ul15 (16 kDa, Protein from Rabbit)
- Ul13 (23 kDa, Protein from Rabbit)
- El41 (3 kDa, Protein from Rabbit)
- El28 (14 kDa, Protein from Rabbit)
- El21 (18 kDa, Protein from Rabbit)
- Us13 (16 kDa, Protein from Rabbit)
- El27 (15 kDa, Protein from Rabbit)
- Zinc ion (65 Da, Ligand)
- Es21 (9 kDa, Protein from Rabbit)
- Us19 (14 kDa, Protein from Rabbit)
- 5s rrna (38 kDa, RNA from Rabbit)
- El8 (36 kDa, Protein from Rabbit)
- El32 (15 kDa, Protein from Rabbit)
- El18 (21 kDa, Protein from Rabbit)
- El6 (33 kDa, Protein from Rabbit)
- El37 (10 kDa, Protein from Rabbit)
- El42 (12 kDa, Protein from Rabbit)
- Us2 (24 kDa, Protein from Rabbit)
- Es19 (15 kDa, Protein from Rabbit)
- Es17 (15 kDa, Protein from Rabbit)
- El19 (21 kDa, Protein from Rabbit)
- Serbp1 (3 kDa, Protein from Rabbit)
- El36 (11 kDa, Protein from Rabbit)
- Ul23 (13 kDa, Protein from Rabbit)
- Es25 (8 kDa, Protein from Rabbit)
Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6mte
Q-score: 0.476
Brown A, Baird MR, Yip MC, Murray J, Shao S
eLife (2018) 7 [ Pubmed: 30355441 DOI: doi:10.7554/eLife.40486 ]
- El34 (12 kDa, Protein from Rabbit)
- Ul6 (21 kDa, Protein from Rabbit)
- El22 (11 kDa, Protein from Rabbit)
- Es28 (7 kDa, Protein from Rabbit)
- Es12 (13 kDa, Protein from Rabbit)
- Es24 (14 kDa, Protein from Rabbit)
- Es31 (7 kDa, Protein from Rabbit)
- Us17 (18 kDa, Protein from Rabbit)
- Ul14 (13 kDa, Protein from Rabbit)
- El30 (10 kDa, Protein from Rabbit)
- Ul24 (15 kDa, Protein from Rabbit)
- Ul5 (19 kDa, Protein from Rabbit)
- El24 (17 kDa, Protein from Rabbit)
- El38 (8 kDa, Protein from Rabbit)
- Ul29 (14 kDa, Protein from Rabbit)
- Us4 (21 kDa, Protein from Rabbit)
- El14 (16 kDa, Protein from Rabbit)
- Es26 (11 kDa, Protein from Rabbit)
- 28s rrna (1 MDa, RNA from Rabbit)
- Us3 (25 kDa, Protein from Rabbit)
- Us8 (14 kDa, Protein from Rabbit)
- Ul22 (17 kDa, Protein from Rabbit)
- Us19 (14 kDa, Protein from Rabbit)
- El43 (10 kDa, Protein from Rabbit)
- Ul2 (26 kDa, Protein from Rabbit)
- Es7 (22 kDa, Protein from Rabbit)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Es6 (27 kDa, Protein from Rabbit)
- Us5 (24 kDa, Protein from Rabbit)
- Rack1 (34 kDa, Protein from Rabbit)
- El15 (24 kDa, Protein from Rabbit)
- El20 (20 kDa, Protein from Rabbit)
- El39 (6 kDa, Protein from Rabbit)
- Es27 (9 kDa, Protein from Rabbit)
- El19 (21 kDa, Protein from Bovine)
- Ul30 (26 kDa, Protein from Rabbit)
- Ul4 (41 kDa, Protein from Rabbit)
- Us14 (6 kDa, Protein from Rabbit)
- Es10 (11 kDa, Protein from Rabbit)
- El40 (6 kDa, Protein from Rabbit)
- Ul3 (45 kDa, Protein from Rabbit)
- Us11 (14 kDa, Protein from Rabbit)
- Es4 (29 kDa, Protein from Rabbit)
- 18s rrna (548 kDa, RNA from Rabbit)
- Serbp1 (6 kDa, Protein from Rabbit)
- Us9 (16 kDa, Protein from Rabbit)
- El13 (24 kDa, Protein from Rabbit)
- Es30 (6 kDa, Protein from Rabbit)
- Ul10 (21 kDa, Protein from Rabbit)
- 5.8s rrna (48 kDa, RNA from Rabbit)
- El31 (12 kDa, Protein from Rabbit)
- Us12 (15 kDa, Protein from Rabbit)
- Es8 (24 kDa, Protein from Rabbit)
- Us15 (17 kDa, Protein from Rabbit)
- Ul18 (34 kDa, Protein from Rabbit)
- Ul11 (16 kDa, Protein from Rabbit)
- El29 (26 kDa, Protein from Rabbit)
- Magnesium ion (24 Da, Ligand)
- El33 (12 kDa, Protein from Rabbit)
- Ul16 (24 kDa, Protein from Rabbit)
- Us10 (11 kDa, Protein from Rabbit)
- El28 (14 kDa, Protein from Rabbit)
- Es1 (24 kDa, Protein from Rabbit)
- Us7 (22 kDa, Protein from Rabbit)
- Ul15 (16 kDa, Protein from Rabbit)
- Ul13 (23 kDa, Protein from Rabbit)
- El41 (3 kDa, Protein from Rabbit)
- El21 (18 kDa, Protein from Rabbit)
- Us13 (16 kDa, Protein from Rabbit)
- El27 (15 kDa, Protein from Rabbit)
- Zinc ion (65 Da, Ligand)
- Es21 (9 kDa, Protein from Rabbit)
- Rabbit 80s ribosome with eef2 and serbp1 (rotated state) (Complex from Oryctolagus cuniculus)
- 5s rrna (38 kDa, RNA from Rabbit)
- El8 (36 kDa, Protein from Rabbit)
- El32 (15 kDa, Protein from Rabbit)
- El18 (21 kDa, Protein from Rabbit)
- El6 (33 kDa, Protein from Rabbit)
- El37 (10 kDa, Protein from Rabbit)
- El42 (12 kDa, Protein from Rabbit)
- Us2 (24 kDa, Protein from Rabbit)
- Es19 (15 kDa, Protein from Rabbit)
- Es17 (15 kDa, Protein from Rabbit)
- Eef2 (94 kDa, Protein from Rabbit)
- El36 (11 kDa, Protein from Rabbit)
- Ul23 (13 kDa, Protein from Rabbit)
- Es25 (8 kDa, Protein from Rabbit)