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initial_angle_assignment_type:"MAXIMUM LIKELIHOOD" AND xref_links:"pdb" AND assembly_molecular_weight:{2000000 TO 5000000] AND electron_source:"FIELD EMISSION GUN" AND citation_journal_name:"NUCLEIC ACIDS RES"
Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)
Release date: Feb. 28, 2024
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8uu4
Q-score: 0.508
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8uu4
Q-score: 0.508
Nucleic Acids Res (2024) 52 pp. 4053-4066 [ DOI: doi:10.1093/nar/gkae128 Pubmed: 38407413 ]
Sample:
- Large ribosomal subunit protein ul18 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul4 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl31b (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us17 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl34 (5 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs20 (9 kDa, Protein from Listeria innocua)
- Listeria innocua 70s ribosome bound to hpf (2 MDa, Complex from Listeria innocua)
- Large ribosomal subunit protein ul15 (15 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl20 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us5 (17 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul6 (19 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul22 (12 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul2 (30 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs16 (10 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us19 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl27 (10 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs18 (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us4 (22 kDa, Protein from Listeria innocua)
- Ribosome hibernation promoting factor (21 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul13 (16 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl28 (7 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl35 (7 kDa, Protein from Listeria innocua)
- Zinc ion (65 Da, Ligand)
- Small ribosomal subunit protein us8 (14 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us14 (7 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us12 (15 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs6 (11 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us3 (24 kDa, Protein from Listeria innocua)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us7 (17 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us13 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us10 (11 kDa, Protein from Listeria innocua)
- 23s ribosomal rna (951 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein ul14 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl21 (11 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul16 (16 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us11 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul24 (11 kDa, Protein from Listeria innocua)
- Magnesium ion (24 Da, Ligand)
- Large ribosomal subunit protein bl36 (4 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl17 (15 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl19 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us2 (28 kDa, Protein from Listeria innocua)
- 16s ribosomal rna (501 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein ul3 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul29 (7 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul23 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul5 (20 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul30 (6 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl33 (6 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us15 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl32 (6 kDa, Protein from Listeria innocua)
- 5s ribosomal rna (37 kDa, RNA from Listeria innocua)
- Small ribosomal subunit protein us9 (14 kDa, Protein from Listeria innocua)
Release date: Feb. 28, 2024
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8uu5
Q-score: 0.552
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8uu5
Q-score: 0.552
Nucleic Acids Res (2024) 52 pp. 4053-4066 [ Pubmed: 38407413 DOI: doi:10.1093/nar/gkae128 ]
Sample:
- Listeria innocua 70s ribosome in complex with pe/e-trna (2 MDa, Complex from Listeria innocua)
- Small ribosomal subunit protein us5 (17 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us7 (17 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul6 (19 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul13 (16 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul2 (30 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl33 (6 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl20 (13 kDa, Protein from Listeria innocua)
- 5s ribosomal rna (37 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein bl27 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl31b (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us12 (15 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul16 (16 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl19 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us19 (10 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us17 (10 kDa, Protein from Listeria innocua)
- 23s ribosomal rna (951 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein ul30 (6 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs6 (11 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul3 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul15 (15 kDa, Protein from Listeria innocua)
- Magnesium ion (24 Da, Ligand)
- Small ribosomal subunit protein us8 (14 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl21 (11 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl34 (5 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us9 (14 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl36 (4 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul4 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul24 (11 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us4 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl32 (6 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us15 (10 kDa, Protein from Listeria innocua)
- 16s ribosomal rna (501 kDa, RNA from Listeria innocua)
- Small ribosomal subunit protein us13 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul23 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul14 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul18 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us11 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul22 (12 kDa, Protein from Listeria innocua)
- Zinc ion (65 Da, Ligand)
- Small ribosomal subunit protein us3 (24 kDa, Protein from Listeria innocua)
- F-stop mrna (6 kDa, RNA from Escherichia phage T4)
- Large ribosomal subunit protein bl17 (15 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl28 (7 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us2 (28 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us10 (11 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs18 (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs20 (9 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul5 (20 kDa, Protein from Listeria innocua)
- Water (18 Da, Ligand)
- Large ribosomal subunit protein ul29 (7 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs16 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl35 (7 kDa, Protein from Listeria innocua)
- Pe/e hybrid state phenylalanine trna (24 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein us14 (7 kDa, Protein from Listeria innocua)
Release date: Feb. 28, 2024
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8uu6
Q-score: 0.489
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8uu6
Q-score: 0.489
Nucleic Acids Res (2024) 52 pp. 4053-4066 [ DOI: doi:10.1093/nar/gkae128 Pubmed: 38407413 ]
Sample:
- Large ribosomal subunit protein ul18 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul4 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl31b (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us17 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl34 (5 kDa, Protein from Listeria innocua)
- Listeria innocua 70s ribosome in complex with p/e-trna (2 MDa, Complex from Listeria innocua)
- Small ribosomal subunit protein bs20 (9 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul15 (15 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl20 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us5 (17 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul6 (19 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul22 (12 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul2 (30 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs16 (10 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us19 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl27 (10 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs18 (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us4 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl28 (7 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul13 (16 kDa, Protein from Listeria innocua)
- Potassium ion (39 Da, Ligand)
- Large ribosomal subunit protein bl35 (7 kDa, Protein from Listeria innocua)
- Zinc ion (65 Da, Ligand)
- Small ribosomal subunit protein us8 (14 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us14 (7 kDa, Protein from Listeria innocua)
- P/e hybrid state phenylalanine trna (24 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein us12 (15 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs6 (11 kDa, Protein from Listeria innocua)
- F-stop mrna (6 kDa, RNA from Escherichia phage T4)
- Small ribosomal subunit protein us3 (24 kDa, Protein from Listeria innocua)
- Water (18 Da, Ligand)
- Small ribosomal subunit protein us7 (17 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us13 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us10 (11 kDa, Protein from Listeria innocua)
- 23s ribosomal rna (951 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein ul14 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl21 (11 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul16 (16 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us11 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul24 (11 kDa, Protein from Listeria innocua)
- Magnesium ion (24 Da, Ligand)
- Large ribosomal subunit protein bl36 (4 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl17 (15 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl19 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us2 (28 kDa, Protein from Listeria innocua)
- 16s ribosomal rna (501 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein ul3 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul29 (7 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul23 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul5 (20 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul30 (6 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl33 (6 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us15 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl32 (6 kDa, Protein from Listeria innocua)
- 5s ribosomal rna (37 kDa, RNA from Listeria innocua)
- Small ribosomal subunit protein us9 (14 kDa, Protein from Listeria innocua)
Release date: Feb. 28, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8uu7
Q-score: 0.512
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8uu7
Q-score: 0.512
Nucleic Acids Res (2024) 52 pp. 4053-4066 [ Pubmed: 38407413 DOI: doi:10.1093/nar/gkae128 ]
Sample:
- Small ribosomal subunit protein us5 (17 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us7 (17 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul6 (19 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul13 (16 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul2 (30 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl33 (6 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl20 (13 kDa, Protein from Listeria innocua)
- 5s ribosomal rna (37 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein bl27 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl31b (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us12 (15 kDa, Protein from Listeria innocua)
- Ribosome hibernation promoting factor (21 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul16 (16 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl19 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us19 (10 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us17 (10 kDa, Protein from Listeria innocua)
- 23s ribosomal rna (951 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein ul30 (6 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs6 (11 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul3 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul15 (15 kDa, Protein from Listeria innocua)
- Magnesium ion (24 Da, Ligand)
- Gtpase hflx (47 kDa, Protein from Listeria monocytogenes EGD-e)
- Small ribosomal subunit protein us8 (14 kDa, Protein from Listeria innocua)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Listeria innocua 70s ribosome in complex with hpf, hflxr and e-site trna (2 MDa, Complex from Listeria innocua)
- Large ribosomal subunit protein bl21 (11 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl34 (5 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us9 (14 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl36 (4 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul4 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul24 (11 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us4 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl32 (6 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us15 (10 kDa, Protein from Listeria innocua)
- E-site phenylalanine trna (24 kDa, RNA from Escherichia coli)
- 16s ribosomal rna (501 kDa, RNA from Listeria innocua)
- Small ribosomal subunit protein us13 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul23 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul14 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul18 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us11 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul22 (12 kDa, Protein from Listeria innocua)
- Zinc ion (65 Da, Ligand)
- Small ribosomal subunit protein us3 (24 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl17 (15 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl28 (7 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us2 (28 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us10 (11 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs18 (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs20 (9 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul5 (20 kDa, Protein from Listeria innocua)
- Water (18 Da, Ligand)
- Large ribosomal subunit protein ul29 (7 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs16 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl35 (7 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us14 (7 kDa, Protein from Listeria innocua)
Release date: Feb. 28, 2024
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8uu8
Q-score: 0.496
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8uu8
Q-score: 0.496
Nucleic Acids Res (2024) 52 pp. 4053-4066 [ Pubmed: 38407413 DOI: doi:10.1093/nar/gkae128 ]
Sample:
- Small ribosomal subunit protein us5 (17 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us7 (17 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul6 (19 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul13 (16 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul2 (30 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl33 (6 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl20 (13 kDa, Protein from Listeria innocua)
- 5s ribosomal rna (37 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein bl27 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl31b (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us12 (15 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul16 (16 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul10 (17 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl19 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us19 (10 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us17 (10 kDa, Protein from Listeria innocua)
- 23s ribosomal rna (951 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein ul30 (6 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs6 (11 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul3 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul15 (15 kDa, Protein from Listeria innocua)
- Magnesium ion (24 Da, Ligand)
- Gtpase hflx (47 kDa, Protein from Listeria monocytogenes EGD-e)
- Small ribosomal subunit protein us8 (14 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul11 (14 kDa, Protein from Listeria innocua)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Large ribosomal subunit protein bl21 (11 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl34 (5 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us9 (14 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl36 (4 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul4 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul24 (11 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us4 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl32 (6 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us15 (10 kDa, Protein from Listeria innocua)
- 16s ribosomal rna (501 kDa, RNA from Listeria innocua)
- Listeria innocua 70s ribosome in complex with hflxr and pe/e-trna (2 MDa, Complex from Listeria innocua)
- Small ribosomal subunit protein us13 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul14 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul23 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul18 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us11 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul22 (12 kDa, Protein from Listeria innocua)
- Zinc ion (65 Da, Ligand)
- Small ribosomal subunit protein us3 (24 kDa, Protein from Listeria innocua)
- F-stop mrna (6 kDa, RNA from Escherichia phage T4)
- Large ribosomal subunit protein bl17 (15 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl28 (7 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us2 (28 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us10 (11 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs18 (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs20 (9 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul5 (20 kDa, Protein from Listeria innocua)
- Water (18 Da, Ligand)
- Large ribosomal subunit protein ul29 (7 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs16 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl35 (7 kDa, Protein from Listeria innocua)
- Pe/e hybrid state phenylalanine trna (24 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein us14 (7 kDa, Protein from Listeria innocua)
Release date: Feb. 28, 2024
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8uu9
Q-score: 0.495
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8uu9
Q-score: 0.495
Nucleic Acids Res (2024) 52 pp. 4053-4066 [ Pubmed: 38407413 DOI: doi:10.1093/nar/gkae128 ]
Sample:
- Small ribosomal subunit protein us5 (17 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us7 (17 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul6 (19 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul13 (16 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul2 (30 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl33 (6 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl20 (13 kDa, Protein from Listeria innocua)
- 5s ribosomal rna (37 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein bl27 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl31b (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us12 (15 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul16 (16 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl19 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us19 (10 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us17 (10 kDa, Protein from Listeria innocua)
- 23s ribosomal rna (951 kDa, RNA from Listeria innocua)
- Large ribosomal subunit protein ul30 (6 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs6 (11 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul3 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul15 (15 kDa, Protein from Listeria innocua)
- Magnesium ion (24 Da, Ligand)
- Gtpase hflx (47 kDa, Protein from Listeria monocytogenes EGD-e)
- Small ribosomal subunit protein us8 (14 kDa, Protein from Listeria innocua)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Large ribosomal subunit protein bl21 (11 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl34 (5 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us9 (14 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl36 (4 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul4 (22 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul24 (11 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us4 (22 kDa, Protein from Listeria innocua)
- Pe/e hybrid state phenylalanine trna (24 kDa, RNA from Escherichia coli)
- Small ribosomal subunit protein us15 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl32 (6 kDa, Protein from Listeria innocua)
- 16s ribosomal rna (501 kDa, RNA from Listeria innocua)
- Listeria innocua 70s ribosome in complex with hflxr and pe/e-trna (2 MDa, Complex from Listeria innocua)
- Small ribosomal subunit protein us13 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul14 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul23 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul18 (13 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us11 (13 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul22 (12 kDa, Protein from Listeria innocua)
- Zinc ion (65 Da, Ligand)
- Small ribosomal subunit protein us3 (24 kDa, Protein from Listeria innocua)
- F-stop mrna (6 kDa, RNA from Escherichia phage T4)
- Large ribosomal subunit protein bl17 (15 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl28 (7 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us2 (28 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us10 (11 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs18 (9 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs20 (9 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein ul5 (20 kDa, Protein from Listeria innocua)
- Water (18 Da, Ligand)
- Large ribosomal subunit protein ul29 (7 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein bs16 (10 kDa, Protein from Listeria innocua)
- Large ribosomal subunit protein bl35 (7 kDa, Protein from Listeria innocua)
- Small ribosomal subunit protein us14 (7 kDa, Protein from Listeria innocua)
Structural insights into the binding of bS1 to the ribosome
Release date: May 10, 2023
Resolution: 3.42 Å
EM Method: Single-particle
Fitted PDBs: 8a3l
Q-score: 0.46
Resolution: 3.42 Å
EM Method: Single-particle
Fitted PDBs: 8a3l
Q-score: 0.46
D'Urso G, Chat S, Gillet R, Giudice E
Nucleic Acids Res (2023) 51 pp. 3410-3419 [ Pubmed: 36840711 DOI: doi:10.1093/nar/gkad126 ]
Sample:
- Mrna (12 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli K-12)
- 23s ribosomal rna (941 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli K-12)
- 5s ribosomal rna (38 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli K-12)
- P-site fmet-trna(fmet) (24 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli K-12)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli K-12)
- 16s ribosomal rna (498 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s1 (61 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli K-12)
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s18 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s2 (24 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli K-12)
- E-site trna (24 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli K-12)
- Elongation competent ribosome in complex with bs1 (2 GDa, Complex from Escherichia coli)
ARE-ABCF VmlR2 bound to a 70S ribosome
Release date: April 5, 2023
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8buu
Q-score: 0.514
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8buu
Q-score: 0.514
Obana N, Takada H, Crowe-McAuliffe C, Iwamoto M, Egorov AA, Wu KJY, Chiba S, Murina V, Paternoga H, Tresco BIC, Nomura N, Myers AG, Atkinson GC, Wilson DN, Hauryliuk V
Nucleic Acids Res (2023) 51 pp. 4536-4554 [ DOI: doi:10.1093/nar/gkad193 Pubmed: 36951104 ]
Sample:
- 30s ribosomal protein s15 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l21 (11 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- Potassium ion (39 Da, Ligand)
- 30s ribosomal protein s19 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l5 (20 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l17 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s10 (11 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l24 (11 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l33 1 (5 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 23s rrna (949 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l22 (12 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s4 (22 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l18 (12 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 70s ribosome with vmlr2 bound in the e site, a distorted trna in the p site, and a substoichiometric distorted trna in the a site (2 MDa, Complex from Neobacillus vireti)
- 50s ribosomal protein l4 (22 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l30 (6 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l23 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s2 (28 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 16s rrna (503 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s12 (15 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- Expz (72 kDa, Protein from Neobacillus vireti)
- 50s ribosomal protein l3 (22 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l2 (30 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- Trna-fmet (24 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l36 (4 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l29 (7 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l16 (16 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 5s rrna (38 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l14 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s14 (7 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s3 (24 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l13 (16 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l19 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s5 (17 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s8 (14 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s18 (8 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s7 (17 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l15 (15 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s9 (14 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s6 (11 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s17 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- Mrna (4 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s20 (9 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s13 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l27 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l35 (7 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l6 (19 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l32 (6 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l20 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l34 (5 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s16 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 30s ribosomal protein s11 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l28 (6 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
Giardia Ribosome in PRE-T Classical State (C)
Release date: March 22, 2023
Resolution: 6.49 Å
EM Method: Single-particle
Fitted PDBs: 8bsj
Q-score: 0.411
Resolution: 6.49 Å
EM Method: Single-particle
Fitted PDBs: 8bsj
Q-score: 0.411
Majumdar S, Emmerich A, Krakovka S, Mandava CS, Svard SG, Sanyal S
Nucleic Acids Res (2023) 51 pp. 3436-3451 [ Pubmed: 36912103 DOI: doi:10.1093/nar/gkad176 ]
Sample:
- Ribosomal protein l23a (16 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l27 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l29 (14 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s8 (19 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l41 (3 kDa, Protein from Giardia intestinalis)
- Trna (24 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s20 (14 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s7 (21 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l6 (20 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l44 (12 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l11 (19 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s14 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l37a (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s10b (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s28 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l10 (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l27a (17 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l29 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l23 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l26 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l34 (13 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s4 (30 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s18 (17 kDa, Protein from Giardia intestinalis)
- Ribosomal l38e (8 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l7a (25 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s17 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s9 (21 kDa, Protein from Giardia intestinalis)
- 5.8s rrna (45 kDa, RNA from Giardia intestinalis)
- 60s ribosomal protein l18a (20 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l31b (12 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l13a (22 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s13 (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s16 (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s15 (16 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l7 (27 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s3a (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l21 (18 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s21 (9 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s11 (18 kDa, Protein from Giardia intestinalis)
- Trna (23 kDa, RNA from Giardia intestinalis)
- 5s rrna (38 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l5 (33 kDa, Protein from Giardia intestinalis)
- Mrna (3 kDa, RNA from Giardia intestinalis)
- 40s ribosomal protein s30 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s24 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l18 (20 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l4 (35 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l14 (14 kDa, Protein from Giardia intestinalis)
- Ubiquitin/ribosomal protein l40e (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l2 (27 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l3 (42 kDa, Protein from Giardia intestinalis)
- Ribosomal l22e (14 kDa, Protein from Giardia intestinalis)
- Ssu ribosomal protein s12p (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l24 (22 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l32 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l15 (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s15a (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l30 (11 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s3 (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s19e (15 kDa, Protein from Giardia intestinalis)
- Giardia ribosome in pre-t classical state (c) (Complex from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s26 (12 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l13 (26 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l17 (18 kDa, Protein from Giardia intestinalis)
- Large subunit rrna (874 kDa, RNA from Giardia intestinalis)
- 40s ribosomal protein sa (28 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s6 (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l35a (13 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l10a (24 kDa, Protein from Giardia intestinalis)
- Small subunit rrna (471 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s29a (6 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s25 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l19 (23 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s2 (26 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s27 (9 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s5 (21 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l37 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l36-1 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l39 (6 kDa, Protein from Giardia intestinalis)
Giardia Ribosome in PRE-T Hybrid State (D1)
Release date: March 22, 2023
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 8btd
Q-score: 0.366
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 8btd
Q-score: 0.366
Majumdar S, Emmerich A, Krakovka S, Mandava CS, Svard SG, Sanyal S
Nucleic Acids Res (2023) 51 pp. 3436-3451 [ Pubmed: 36912103 DOI: doi:10.1093/nar/gkad176 ]
Sample:
- Ribosomal protein s28 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l39 (6 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s30 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s2 (26 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l37a (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l13 (26 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l13a (22 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l11 (19 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s11 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s15 (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l18 (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s21 (9 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s19e (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein sa (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s13 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Trna (24 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l2 (27 kDa, Protein from Giardia lamblia ATCC 50803)
- Small subunit rrna (471 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l38e (8 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s14 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l34 (13 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l35a (13 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s6 (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l22e (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l5 (33 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s27 (9 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s10b (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ubiquitin/ribosomal protein l40e (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l27a (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l41 (3 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l37 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s8 (19 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l3 (42 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l29 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s26 (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l24 (22 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l23 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s3 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l44 (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l7a (25 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s25 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s4 (30 kDa, Protein from Giardia lamblia ATCC 50803)
- Mrna (3 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l26 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s20 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l30 (11 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s9 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l32 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- 5s rrna (38 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l29 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Large subunit rrna (874 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l31b (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s15a (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l27 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s24 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l10 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l23a (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l21 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s18 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l17 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s16 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s5 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l4 (35 kDa, Protein from Giardia lamblia ATCC 50803)
- Giardia ribosome in pre-t hybrid state (d1) (Complex from Giardia lamblia ATCC 50803)
- Ribosomal protein l36-1 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l15 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l6 (20 kDa, Protein from Giardia lamblia ATCC 50803)
- 5.8s rrna (45 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein s23 (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Trna (24 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l7 (27 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s17 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s29a (6 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l19 (23 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l10a (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l18a (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s3a (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l14 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s7 (21 kDa, Protein from Giardia lamblia ATCC 50803)